RNA–Protein interactions for RNA: ENST00000356183.8

GTF3C1-201, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-201ENST00000356183 ZSCAN5CA6NGD5 496 aaPredicted RBP11.24□□□□□ -0.61
GTF3C1-201ENST00000356183 KRT36O76013 467 aa11.24□□□□□ -0.61
GTF3C1-201ENST00000356183 MAPK9P45984 424 aa11.24□□□□□ -0.61
GTF3C1-201ENST00000356183 MAD2L1Q13257 205 aaPredicted RBP11.24□□□□□ -0.61
GTF3C1-201ENST00000356183 CBFBQ13951 182 aa11.24□□□□□ -0.61
GTF3C1-201ENST00000356183 PDK2Q15119 407 aa11.24□□□□□ -0.61
GTF3C1-201ENST00000356183 NFKBIZQ9BYH8 718 aa11.24□□□□□ -0.61
GTF3C1-201ENST00000356183 DSN1Q9H410 356 aa11.24□□□□□ -0.61
GTF3C1-201ENST00000356183 CAB39LQ9H9S4 337 aa11.24□□□□□ -0.61
GTF3C1-201ENST00000356183 PFDN2Q9UHV9 154 aa11.24□□□□□ -0.61
GTF3C1-201ENST00000356183 PACSIN3Q9UKS6 424 aa11.24□□□□□ -0.61
GTF3C1-201ENST00000356183 IKZF3Q9UKT9 509 aa11.24□□□□□ -0.61
GTF3C1-201ENST00000356183 HBS1LQ9Y450 684 aaKnown RBP11.24□□□□□ -0.61
GTF3C1-201ENST00000356183 GPC6Q9Y625 555 aaPredicted RBP11.24□□□□□ -0.61
GTF3C1-201ENST00000356183 POLD2P49005 469 aa11.23□□□□□ -0.61
GTF3C1-201ENST00000356183 BST2Q10589 180 aaKnown RBP11.23□□□□□ -0.61
GTF3C1-201ENST00000356183 CARTPTQ16568 116 aa11.23□□□□□ -0.61
GTF3C1-201ENST00000356183 ACOT1Q86TX2 421 aa11.23□□□□□ -0.61
GTF3C1-201ENST00000356183 PROX1Q92786 737 aa11.23□□□□□ -0.61
GTF3C1-201ENST00000356183 CPB2Q96IY4 423 aa11.23□□□□□ -0.61
GTF3C1-201ENST00000356183 MTMR12Q9C0I1 747 aa11.23□□□□□ -0.61
GTF3C1-201ENST00000356183 PCDH12Q9NPG4 1184 aa11.23□□□□□ -0.61
GTF3C1-201ENST00000356183 PTGFRNQ9P2B2 879 aa11.23□□□□□ -0.61
GTF3C1-201ENST00000356183 ANAPC2Q9UJX6 822 aa11.23□□□□□ -0.61
GTF3C1-201ENST00000356183 CLTCL1P53675 1640 aa11.23□□□□□ -0.61
GTF3C1-201ENST00000356183 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.23□□□□□ -0.61
GTF3C1-201ENST00000356183 PRG2P13727 222 aa11.23□□□□□ -0.61
GTF3C1-201ENST00000356183 CYP2F1P24903 491 aa11.23□□□□□ -0.61
GTF3C1-201ENST00000356183 KCNMB4Q86W47 210 aa11.23□□□□□ -0.61
GTF3C1-201ENST00000356183 CREG2Q8IUH2 290 aa11.23□□□□□ -0.61
GTF3C1-201ENST00000356183 PGM2Q96G03 612 aa11.23□□□□□ -0.61
GTF3C1-201ENST00000356183 ZNF304Q9HCX3 659 aa11.23□□□□□ -0.61
GTF3C1-201ENST00000356183 TRNAU1APQ9NX07 287 aaKnown RBP11.23□□□□□ -0.61
GTF3C1-201ENST00000356183 TBX20Q9UMR3 447 aa11.23□□□□□ -0.61
GTF3C1-201ENST00000356183 INO80Q9ULG1 1556 aaPredicted RBP11.23□□□□□ -0.61
GTF3C1-201ENST00000356183 PNPLA7Q6ZV29 1317 aa11.23□□□□□ -0.61
GTF3C1-201ENST00000356183 TFECO14948 347 aaPredicted RBP11.23□□□□□ -0.61
GTF3C1-201ENST00000356183 NPR3P17342 541 aa11.23□□□□□ -0.61
GTF3C1-201ENST00000356183 IFNGR2P38484 337 aa11.23□□□□□ -0.61
GTF3C1-201ENST00000356183 SFSWAPQ12872 951 aaKnown RBP11.23□□□□□ -0.61
GTF3C1-201ENST00000356183 NEK5Q6P3R8 708 aa11.23□□□□□ -0.61
GTF3C1-201ENST00000356183 CCNJLQ8IV13 435 aa11.23□□□□□ -0.61
GTF3C1-201ENST00000356183 DCP1BQ8IZD4 617 aaKnown RBP11.23□□□□□ -0.61
GTF3C1-201ENST00000356183 ELMO3Q96BJ8 720 aa11.23□□□□□ -0.61
GTF3C1-201ENST00000356183 GSDMCQ9BYG8 508 aa11.23□□□□□ -0.61
GTF3C1-201ENST00000356183 QTRT2Q9H974 415 aaKnown RBP11.23□□□□□ -0.61
GTF3C1-201ENST00000356183 ARHGAP20Q9P2F6 1191 aa11.23□□□□□ -0.61
GTF3C1-201ENST00000356183 LGR5O75473 907 aa11.23□□□□□ -0.61
GTF3C1-201ENST00000356183 ANPEPP15144 967 aa11.23□□□□□ -0.61
GTF3C1-201ENST00000356183 GRIA3P42263 894 aa11.23□□□□□ -0.61
GTF3C1-201ENST00000356183 NEK3P51956 506 aa11.23□□□□□ -0.61
GTF3C1-201ENST00000356183 PLK1P53350 603 aa11.23□□□□□ -0.61
GTF3C1-201ENST00000356183 ADAM17P78536 824 aa11.23□□□□□ -0.61
GTF3C1-201ENST00000356183 PRKAA1Q13131 559 aa11.23□□□□□ -0.61
GTF3C1-201ENST00000356183 UBAP2LQ14157 1087 aaKnown RBP11.23□□□□□ -0.61
GTF3C1-201ENST00000356183 SLC38A7Q9NVC3 462 aa11.23□□□□□ -0.61
GTF3C1-201ENST00000356183 CLEC4AQ9UMR7 237 aa11.23□□□□□ -0.61
GTF3C1-201ENST00000356183 ASB14A6NK59 587 aa11.23□□□□□ -0.61
GTF3C1-201ENST00000356183 ZNF879B4DU55 563 aa11.23□□□□□ -0.61
GTF3C1-201ENST00000356183 NELFEP18615 380 aaKnown RBP11.23□□□□□ -0.61
GTF3C1-201ENST00000356183 CRATP43155 626 aa11.23□□□□□ -0.61
GTF3C1-201ENST00000356183 OMPP47874 163 aa11.23□□□□□ -0.61
GTF3C1-201ENST00000356183 IDH2P48735 452 aaKnown RBP11.23□□□□□ -0.61
GTF3C1-201ENST00000356183 SLC11A2P49281 568 aa11.23□□□□□ -0.61
GTF3C1-201ENST00000356183 ERVK-9P63128 1117 aa11.23□□□□□ -0.61
GTF3C1-201ENST00000356183 FOLH1Q04609 750 aa11.23□□□□□ -0.61
GTF3C1-201ENST00000356183 ABRAXAS1Q6UWZ7 409 aa11.23□□□□□ -0.61
GTF3C1-201ENST00000356183 TTC7BQ86TV6 843 aa11.23□□□□□ -0.61
GTF3C1-201ENST00000356183 FAM126BQ8IXS8 530 aa11.23□□□□□ -0.61
GTF3C1-201ENST00000356183 SLC20A1Q8WUM9 679 aa11.23□□□□□ -0.61
GTF3C1-201ENST00000356183 IPCEF1Q8WWN9 437 aaPredicted RBP11.23□□□□□ -0.61
GTF3C1-201ENST00000356183 ERLEC1Q96DZ1 483 aa11.23□□□□□ -0.61
GTF3C1-201ENST00000356183 BBS4Q96RK4 519 aa11.23□□□□□ -0.61
GTF3C1-201ENST00000356183 CCDC3Q9BQI4 270 aa11.23□□□□□ -0.61
GTF3C1-201ENST00000356183 RUSC1Q9BVN2 902 aa11.23□□□□□ -0.61
GTF3C1-201ENST00000356183 GMPPBQ9Y5P6 360 aa11.23□□□□□ -0.61
GTF3C1-201ENST00000356183 CYP11B1P15538 503 aa11.23□□□□□ -0.61
GTF3C1-201ENST00000356183 HPCAL1P37235 193 aa11.23□□□□□ -0.61
GTF3C1-201ENST00000356183 SLC25A3Q00325 362 aa11.23□□□□□ -0.61
GTF3C1-201ENST00000356183 CLEC10AQ8IUN9 316 aa11.23□□□□□ -0.61
GTF3C1-201ENST00000356183 CHPFQ8IZ52 775 aa11.23□□□□□ -0.61
GTF3C1-201ENST00000356183 FBXO39Q8N4B4 442 aa11.23□□□□□ -0.61
GTF3C1-201ENST00000356183 EIF1ADQ8N9N8 165 aaKnown RBP11.23□□□□□ -0.61
GTF3C1-201ENST00000356183 MAGEC3Q8TD91 643 aa11.23□□□□□ -0.61
GTF3C1-201ENST00000356183 WDR41Q9HAD4 459 aa11.23□□□□□ -0.61
GTF3C1-201ENST00000356183 LNPEPQ9UIQ6 1025 aa11.23□□□□□ -0.61
GTF3C1-201ENST00000356183 FAM92AA1XBS5 289 aa11.22□□□□□ -0.61
GTF3C1-201ENST00000356183 EPN2O95208 641 aa11.22□□□□□ -0.61
GTF3C1-201ENST00000356183 MADCAM1Q13477 382 aa11.22□□□□□ -0.61
GTF3C1-201ENST00000356183 SPDYCQ5MJ68 293 aa11.22□□□□□ -0.61
GTF3C1-201ENST00000356183 C16orf46Q6P387 395 aa11.22□□□□□ -0.61
GTF3C1-201ENST00000356183 SUN5Q8TC36 379 aa11.22□□□□□ -0.61
GTF3C1-201ENST00000356183 S100ZQ8WXG8 99 aa11.22□□□□□ -0.61
GTF3C1-201ENST00000356183 SIPA1Q96FS4 1042 aa11.22□□□□□ -0.61
GTF3C1-201ENST00000356183 CPNE1Q99829 537 aa11.22□□□□□ -0.61
GTF3C1-201ENST00000356183 COPS4Q9BT78 406 aa11.22□□□□□ -0.61
GTF3C1-201ENST00000356183 IGSF9BQ9UPX0 1349 aa11.22□□□□□ -0.61
GTF3C1-201ENST00000356183 SETBP1Q9Y6X0 1596 aa11.22□□□□□ -0.61
GTF3C1-201ENST00000356183 SMIM22K7EJ46 135 aa11.22□□□□□ -0.61
GTF3C1-201ENST00000356183 ANXA6P08133 673 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms