RNA–Protein interactions for RNA: ENST00000356005.8

FN1-204, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,846 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-204ENST00000356005 HTR3CQ8WXA8 447 aa11.49□□□□□ -0.57
FN1-204ENST00000356005 ADI1Q9BV57 179 aa11.49□□□□□ -0.57
FN1-204ENST00000356005 ADNPQ9H2P0 1102 aa11.49□□□□□ -0.57
FN1-204ENST00000356005 PCDH9Q9HC56 1237 aa11.49□□□□□ -0.57
FN1-204ENST00000356005 RRAGDQ9NQL2 400 aaPredicted RBP11.49□□□□□ -0.57
FN1-204ENST00000356005 CROCCQ5TZA2 2017 aa11.49□□□□□ -0.57
FN1-204ENST00000356005 PIPSLA2A3N6 862 aa11.49□□□□□ -0.57
FN1-204ENST00000356005 LRRC14BA6NHZ5 514 aa11.49□□□□□ -0.57
FN1-204ENST00000356005 RFC2P35250 354 aa11.49□□□□□ -0.57
FN1-204ENST00000356005 GPR15P49685 360 aa11.49□□□□□ -0.57
FN1-204ENST00000356005 SERPINH1P50454 418 aaKnown RBP11.49□□□□□ -0.57
FN1-204ENST00000356005 RUNX1T1Q06455 604 aa11.49□□□□□ -0.57
FN1-204ENST00000356005 CNGA2Q16280 664 aa11.49□□□□□ -0.57
FN1-204ENST00000356005 SNX30Q5VWJ9 437 aa11.49□□□□□ -0.57
FN1-204ENST00000356005 TSHZ1Q6ZSZ6 1077 aa11.49□□□□□ -0.57
FN1-204ENST00000356005 SPATA21Q7Z572 469 aa11.49□□□□□ -0.57
FN1-204ENST00000356005 TOP6BLQ8N6T0 577 aa11.49□□□□□ -0.57
FN1-204ENST00000356005 GPR20Q99678 358 aa11.49□□□□□ -0.57
FN1-204ENST00000356005 GPR88Q9GZN0 384 aa11.49□□□□□ -0.57
FN1-204ENST00000356005 POLMQ9NP87 494 aaPredicted RBP11.49□□□□□ -0.57
FN1-204ENST00000356005 PNMA8BQ9ULN7 279 aaPredicted RBP11.49□□□□□ -0.57
FN1-204ENST00000356005 AP3M1Q9Y2T2 418 aa11.49□□□□□ -0.57
FN1-204ENST00000356005 MORC2Q9Y6X9 1032 aaPredicted RBP11.49□□□□□ -0.57
FN1-204ENST00000356005 SDK1Q7Z5N4 2213 aa11.49□□□□□ -0.57
FN1-204ENST00000356005 SYN3O14994 580 aa11.49□□□□□ -0.57
FN1-204ENST00000356005 ELNP15502 786 aa11.49□□□□□ -0.57
FN1-204ENST00000356005 PTENP60484 403 aa11.49□□□□□ -0.57
FN1-204ENST00000356005 MRPS15P82914 257 aaKnown RBP11.49□□□□□ -0.57
FN1-204ENST00000356005 TUSC3Q13454 348 aa11.49□□□□□ -0.57
FN1-204ENST00000356005 CHI3L2Q15782 390 aa11.49□□□□□ -0.57
FN1-204ENST00000356005 PDPK2PQ6A1A2 396 aa11.49□□□□□ -0.57
FN1-204ENST00000356005 OTOP2Q7RTS6 562 aa11.49□□□□□ -0.57
FN1-204ENST00000356005 GAS2L3Q86XJ1 694 aa11.49□□□□□ -0.57
FN1-204ENST00000356005 AKAP3O75969 853 aa11.49□□□□□ -0.57
FN1-204ENST00000356005 INHAP05111 366 aa11.49□□□□□ -0.57
FN1-204ENST00000356005 TYMPP19971 482 aa11.49□□□□□ -0.57
FN1-204ENST00000356005 GRAMD4Q6IC98 578 aa11.49□□□□□ -0.57
FN1-204ENST00000356005 GJB7Q6PEY0 223 aa11.49□□□□□ -0.57
FN1-204ENST00000356005 DOK6Q6PKX4 331 aa11.49□□□□□ -0.57
FN1-204ENST00000356005 MON1AQ86VX9 555 aa11.49□□□□□ -0.57
FN1-204ENST00000356005 P3H2Q8IVL5 708 aa11.49□□□□□ -0.57
FN1-204ENST00000356005 SMG7Q92540 1137 aaKnown RBP11.49□□□□□ -0.57
FN1-204ENST00000356005 CPNE1Q99829 537 aa11.49□□□□□ -0.57
FN1-204ENST00000356005 ISCUQ9H1K1 167 aa11.49□□□□□ -0.57
FN1-204ENST00000356005 CNGB3Q9NQW8 809 aa11.49□□□□□ -0.57
FN1-204ENST00000356005 A0A087X1B8 175 aa11.48□□□□□ -0.57
FN1-204ENST00000356005 NCF1BA6NI72 391 aaPredicted RBP11.48□□□□□ -0.57
FN1-204ENST00000356005 NCF1CA8MVU1 366 aaPredicted RBP11.48□□□□□ -0.57
FN1-204ENST00000356005 USP2O75604 605 aaPredicted RBP11.48□□□□□ -0.57
FN1-204ENST00000356005 NUDT14O95848 222 aa11.48□□□□□ -0.57
FN1-204ENST00000356005 PNMA6AP0CW24 399 aaPredicted RBP11.48□□□□□ -0.57
FN1-204ENST00000356005 NCF1P14598 390 aaPredicted RBP11.48□□□□□ -0.57
FN1-204ENST00000356005 AIF1P55008 147 aa11.48□□□□□ -0.57
FN1-204ENST00000356005 KDSRQ06136 332 aa11.48□□□□□ -0.57
FN1-204ENST00000356005 SPIDRQ14159 915 aa11.48□□□□□ -0.57
FN1-204ENST00000356005 C16orf59Q7L2K0 433 aa11.48□□□□□ -0.57
FN1-204ENST00000356005 PTAR1Q7Z6K3 402 aaPredicted RBP11.48□□□□□ -0.57
FN1-204ENST00000356005 C9orf72Q96LT7 481 aa11.48□□□□□ -0.57
FN1-204ENST00000356005 TMEM245Q9H330 911 aa11.48□□□□□ -0.57
FN1-204ENST00000356005 NEK6Q9HC98 313 aa11.48□□□□□ -0.57
FN1-204ENST00000356005 ESYT3A0FGR9 886 aa11.48□□□□□ -0.57
FN1-204ENST00000356005 O00370 1275 aa11.48□□□□□ -0.57
FN1-204ENST00000356005 CYP1A1P04798 512 aaPredicted RBP11.48□□□□□ -0.57
FN1-204ENST00000356005 GLI1P08151 1106 aa11.48□□□□□ -0.57
FN1-204ENST00000356005 CCDC85BQ15834 202 aaPredicted RBP11.48□□□□□ -0.57
FN1-204ENST00000356005 KCNT1Q5JUK3 1230 aa11.48□□□□□ -0.57
FN1-204ENST00000356005 TTC7BQ86TV6 843 aa11.48□□□□□ -0.57
FN1-204ENST00000356005 KIAA0319LQ8IZA0 1049 aa11.48□□□□□ -0.57
FN1-204ENST00000356005 MRC1P22897 1456 aa11.48□□□□□ -0.57
FN1-204ENST00000356005 MAN1A2O60476 641 aa11.48□□□□□ -0.57
FN1-204ENST00000356005 VSNL1P62760 191 aa11.48□□□□□ -0.57
FN1-204ENST00000356005 PKN1Q16512 942 aa11.48□□□□□ -0.57
FN1-204ENST00000356005 TREML2Q5T2D2 321 aa11.48□□□□□ -0.57
FN1-204ENST00000356005 C3orf67Q6ZVT6 689 aa11.48□□□□□ -0.57
FN1-204ENST00000356005 C2orf15Q8WU43 125 aaKnown RBP11.48□□□□□ -0.57
FN1-204ENST00000356005 COLEC10Q9Y6Z7 277 aa11.48□□□□□ -0.57
FN1-204ENST00000356005 NFICP08651 508 aa11.48□□□□□ -0.57
FN1-204ENST00000356005 GABRR2P28476 465 aa11.48□□□□□ -0.57
FN1-204ENST00000356005 S100A5P33763 92 aa11.48□□□□□ -0.57
FN1-204ENST00000356005 MGAT5Q09328 741 aa11.48□□□□□ -0.57
FN1-204ENST00000356005 USP39Q53GS9 565 aaKnown RBP11.48□□□□□ -0.57
FN1-204ENST00000356005 MTMR9Q96QG7 549 aa11.48□□□□□ -0.57
FN1-204ENST00000356005 DEC1Q9P2X7 70 aa11.48□□□□□ -0.57
FN1-204ENST00000356005 PCDHA3Q9Y5H8 950 aa11.48□□□□□ -0.57
FN1-204ENST00000356005 BCL9LQ86UU0 1499 aa11.48□□□□□ -0.57
FN1-204ENST00000356005 DOT1LQ8TEK3 1739 aa11.48□□□□□ -0.57
FN1-204ENST00000356005 A0A0G2JLL6 359 aaPredicted RBP11.48□□□□□ -0.57
FN1-204ENST00000356005 HIST1H2ABP04908 130 aa11.48□□□□□ -0.57
FN1-204ENST00000356005 PFKMP08237 780 aa11.48□□□□□ -0.57
FN1-204ENST00000356005 RPA3P35244 121 aaPredicted RBP11.48□□□□□ -0.57
FN1-204ENST00000356005 MPPE1Q53F39 396 aa11.48□□□□□ -0.57
FN1-204ENST00000356005 HIST3H2AQ7L7L0 130 aa11.48□□□□□ -0.57
FN1-204ENST00000356005 PRRT2Q7Z6L0 340 aaPredicted RBP11.48□□□□□ -0.57
FN1-204ENST00000356005 PHYKPLQ8IUZ5 450 aa11.48□□□□□ -0.57
FN1-204ENST00000356005 GRIN3AQ8TCU5 1115 aa11.48□□□□□ -0.57
FN1-204ENST00000356005 HIST1H2ACQ93077 130 aa11.48□□□□□ -0.57
FN1-204ENST00000356005 ETNK1Q9HBU6 452 aa11.48□□□□□ -0.57
FN1-204ENST00000356005 PCDHA2Q9Y5H9 948 aa11.48□□□□□ -0.57
FN1-204ENST00000356005 BRMS1LQ5PSV4 323 aa11.48□□□□□ -0.57
FN1-204ENST00000356005 TTI2Q6NXR4 508 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms