RNA–Protein interactions for RNA: ENST00000355841.6

PDLIM7-202, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-202ENST00000355841 ACBD5Q5T8D3 534 aaPredicted RBP18.41■□□□□ 0.54
PDLIM7-202ENST00000355841 EMC10Q5UCC4 262 aa18.41■□□□□ 0.54
PDLIM7-202ENST00000355841 CXorf57Q6NSI4 855 aaKnown RBP18.41■□□□□ 0.54
PDLIM7-202ENST00000355841 C1orf228Q6PIY5 440 aa18.41■□□□□ 0.54
PDLIM7-202ENST00000355841 FIBINQ8TAL6 211 aa18.41■□□□□ 0.54
PDLIM7-202ENST00000355841 EPAS1Q99814 870 aa18.41■□□□□ 0.54
PDLIM7-202ENST00000355841 LMAN1LQ9HAT1 526 aa18.41■□□□□ 0.54
PDLIM7-202ENST00000355841 NDFIP2Q9NV92 336 aa18.41■□□□□ 0.54
PDLIM7-202ENST00000355841 PPARGC1AQ9UBK2 798 aaKnown RBP18.41■□□□□ 0.54
PDLIM7-202ENST00000355841 SIT1Q9Y3P8 196 aa18.41■□□□□ 0.54
PDLIM7-202ENST00000355841 CAPN6Q9Y6Q1 641 aa18.41■□□□□ 0.54
PDLIM7-202ENST00000355841 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.4■□□□□ 0.54
PDLIM7-202ENST00000355841 EEF2KO00418 725 aaKnown RBP18.4■□□□□ 0.54
PDLIM7-202ENST00000355841 CLDN11O75508 207 aa18.4■□□□□ 0.54
PDLIM7-202ENST00000355841 SLC1A1P43005 524 aa18.4■□□□□ 0.54
PDLIM7-202ENST00000355841 TPI1P60174 286 aa18.4■□□□□ 0.54
PDLIM7-202ENST00000355841 ZNF177Q13360 481 aaPredicted RBP18.4■□□□□ 0.54
PDLIM7-202ENST00000355841 DPYSL2Q16555 572 aa18.4■□□□□ 0.54
PDLIM7-202ENST00000355841 TMEM215Q68D42 235 aa18.4■□□□□ 0.54
PDLIM7-202ENST00000355841 C11orf63Q6NUN7 778 aa18.4■□□□□ 0.54
PDLIM7-202ENST00000355841 Q6ZS52 159 aa18.4■□□□□ 0.54
PDLIM7-202ENST00000355841 PSTKQ8IV42 348 aaKnown RBP18.4■□□□□ 0.54
PDLIM7-202ENST00000355841 CCDC117Q8IWD4 279 aaPredicted RBP18.4■□□□□ 0.54
PDLIM7-202ENST00000355841 CCDC105Q8IYK2 499 aa18.4■□□□□ 0.54
PDLIM7-202ENST00000355841 LRRC57Q8N9N7 239 aa18.4■□□□□ 0.54
PDLIM7-202ENST00000355841 TEKT4Q8WW24 435 aa18.4■□□□□ 0.54
PDLIM7-202ENST00000355841 SORCS1Q8WY21 1168 aa18.4■□□□□ 0.54
PDLIM7-202ENST00000355841 LMLNQ96KR4 655 aa18.4■□□□□ 0.54
PDLIM7-202ENST00000355841 SLC2A11Q9BYW1 496 aa18.4■□□□□ 0.54
PDLIM7-202ENST00000355841 TSGA10Q9BZW7 698 aa18.4■□□□□ 0.54
PDLIM7-202ENST00000355841 CWC15Q9P013 229 aaKnown RBP18.4■□□□□ 0.54
PDLIM7-202ENST00000355841 ZNF212Q9UDV6 495 aa18.4■□□□□ 0.54
PDLIM7-202ENST00000355841 DNAI1Q9UI46 699 aa18.4■□□□□ 0.54
PDLIM7-202ENST00000355841 GGA2Q9UJY4 613 aa18.4■□□□□ 0.54
PDLIM7-202ENST00000355841 PYCARDQ9ULZ3 195 aa18.4■□□□□ 0.54
PDLIM7-202ENST00000355841 KRT86O43790 486 aa18.39■□□□□ 0.53
PDLIM7-202ENST00000355841 PALMO75781 387 aa18.39■□□□□ 0.53
PDLIM7-202ENST00000355841 DRD1P21728 446 aa18.39■□□□□ 0.53
PDLIM7-202ENST00000355841 MZF1P28698 734 aaPredicted RBP18.39■□□□□ 0.53
PDLIM7-202ENST00000355841 OR1E1P30953 314 aa18.39■□□□□ 0.53
PDLIM7-202ENST00000355841 CDH6P55285 790 aa18.39■□□□□ 0.53
PDLIM7-202ENST00000355841 MMRN1Q13201 1228 aa18.39■□□□□ 0.53
PDLIM7-202ENST00000355841 KRT81Q14533 505 aa18.39■□□□□ 0.53
PDLIM7-202ENST00000355841 FUT11Q495W5 492 aa18.39■□□□□ 0.53
PDLIM7-202ENST00000355841 RFX8Q6ZV50 586 aa18.39■□□□□ 0.53
PDLIM7-202ENST00000355841 CHST9Q7L1S5 443 aa18.39■□□□□ 0.53
PDLIM7-202ENST00000355841 ANKS1BQ7Z6G8 1248 aa18.39■□□□□ 0.53
PDLIM7-202ENST00000355841 NLRP14Q86W24 1093 aa18.39■□□□□ 0.53
PDLIM7-202ENST00000355841 KIAA1524Q8TCG1 905 aa18.39■□□□□ 0.53
PDLIM7-202ENST00000355841 PCDH18Q9HCL0 1135 aa18.39■□□□□ 0.53
PDLIM7-202ENST00000355841 INTS6Q9UL03 887 aaKnown RBP18.39■□□□□ 0.53
PDLIM7-202ENST00000355841 SLC27A6Q9Y2P4 619 aa18.39■□□□□ 0.53
PDLIM7-202ENST00000355841 KRT7P08729 469 aa18.38■□□□□ 0.53
PDLIM7-202ENST00000355841 PABPC1P11940 636 aaKnown RBP18.38■□□□□ 0.53
PDLIM7-202ENST00000355841 CSKP41240 450 aa18.38■□□□□ 0.53
PDLIM7-202ENST00000355841 MARCKSL1P49006 195 aa18.38■□□□□ 0.53
PDLIM7-202ENST00000355841 C2orf27AQ580R0 203 aa18.38■□□□□ 0.53
PDLIM7-202ENST00000355841 POLNQ7Z5Q5 900 aa18.38■□□□□ 0.53
PDLIM7-202ENST00000355841 ADIPOR2Q86V24 386 aa18.38■□□□□ 0.53
PDLIM7-202ENST00000355841 APCDD1Q8J025 514 aa18.38■□□□□ 0.53
PDLIM7-202ENST00000355841 KCTD6Q8NC69 237 aa18.38■□□□□ 0.53
PDLIM7-202ENST00000355841 RAPGEF5Q92565 580 aa18.38■□□□□ 0.53
PDLIM7-202ENST00000355841 EXOC4Q96A65 974 aa18.38■□□□□ 0.53
PDLIM7-202ENST00000355841 NELL2Q99435 816 aa18.38■□□□□ 0.53
PDLIM7-202ENST00000355841 CIPCQ9C0C6 399 aa18.38■□□□□ 0.53
PDLIM7-202ENST00000355841 TRMT1Q9NXH9 659 aaKnown RBP18.38■□□□□ 0.53
PDLIM7-202ENST00000355841 HCN2Q9UL51 889 aa18.38■□□□□ 0.53
PDLIM7-202ENST00000355841 KIAA1549LQ6ZVL6 1849 aa18.38■□□□□ 0.53
PDLIM7-202ENST00000355841 A0A0D9SEW6 157 aa18.38■□□□□ 0.53
PDLIM7-202ENST00000355841 DAPK3O43293 454 aa18.38■□□□□ 0.53
PDLIM7-202ENST00000355841 RNF40O75150 1001 aa18.38■□□□□ 0.53
PDLIM7-202ENST00000355841 FTCDO95954 541 aa18.38■□□□□ 0.53
PDLIM7-202ENST00000355841 RHOQP17081 205 aa18.38■□□□□ 0.53
PDLIM7-202ENST00000355841 HOXC13P31276 330 aa18.38■□□□□ 0.53
PDLIM7-202ENST00000355841 TIE1P35590 1138 aa18.38■□□□□ 0.53
PDLIM7-202ENST00000355841 ARSEP51690 589 aa18.38■□□□□ 0.53
PDLIM7-202ENST00000355841 RNF219Q5W0B1 726 aaPredicted RBP18.38■□□□□ 0.53
PDLIM7-202ENST00000355841 PKN3Q6P5Z2 889 aa18.38■□□□□ 0.53
PDLIM7-202ENST00000355841 RHOT1Q8IXI2 618 aa18.38■□□□□ 0.53
PDLIM7-202ENST00000355841 NETO2Q8NC67 525 aa18.38■□□□□ 0.53
PDLIM7-202ENST00000355841 KRT35Q92764 455 aa18.38■□□□□ 0.53
PDLIM7-202ENST00000355841 CALN1Q9BXU9 219 aa18.38■□□□□ 0.53
PDLIM7-202ENST00000355841 POLR3BQ9NW08 1133 aaPredicted RBP18.38■□□□□ 0.53
PDLIM7-202ENST00000355841 KIAA1522Q9P206 1035 aaPredicted RBP18.38■□□□□ 0.53
PDLIM7-202ENST00000355841 TBC1D30Q9Y2I9 924 aa18.38■□□□□ 0.53
PDLIM7-202ENST00000355841 MFHAS1Q9Y4C4 1052 aa18.38■□□□□ 0.53
PDLIM7-202ENST00000355841 A0A0A0MRY4 1105 aa18.37■□□□□ 0.53
PDLIM7-202ENST00000355841 RHOCP08134 193 aa18.37■□□□□ 0.53
PDLIM7-202ENST00000355841 AOC1P19801 751 aa18.37■□□□□ 0.53
PDLIM7-202ENST00000355841 AMPD1P23109 780 aa18.37■□□□□ 0.53
PDLIM7-202ENST00000355841 IL4RP24394 825 aa18.37■□□□□ 0.53
PDLIM7-202ENST00000355841 DPYSL3Q14195 570 aa18.37■□□□□ 0.53
PDLIM7-202ENST00000355841 GAS6Q14393 721 aa18.37■□□□□ 0.53
PDLIM7-202ENST00000355841 IFI16Q16666 785 aaKnown RBP18.37■□□□□ 0.53
PDLIM7-202ENST00000355841 SUGP1Q8IWZ8 645 aaKnown RBP18.37■□□□□ 0.53
PDLIM7-202ENST00000355841 TMEM105Q8N8V8 129 aa18.37■□□□□ 0.53
PDLIM7-202ENST00000355841 CYB5D2Q8WUJ1 264 aa18.37■□□□□ 0.53
PDLIM7-202ENST00000355841 CSPG4P5Q96PW8 444 aa18.37■□□□□ 0.53
PDLIM7-202ENST00000355841 MUC3BQ9H195 1237 aa18.37■□□□□ 0.53
PDLIM7-202ENST00000355841 TMEM248Q9NWD8 314 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms