RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 CTSEP14091 401 aa18.37■□□□□ 0.53
COL18A1-202ENST00000355480 PECAM1P16284 738 aaPredicted RBP18.37■□□□□ 0.53
COL18A1-202ENST00000355480 C1DQ13901 141 aaKnown RBP18.37■□□□□ 0.53
COL18A1-202ENST00000355480 PPP1R16AQ96I34 528 aa18.37■□□□□ 0.53
COL18A1-202ENST00000355480 DMGDHQ9UI17 866 aaKnown RBP18.37■□□□□ 0.53
COL18A1-202ENST00000355480 ZNF112Q9UJU3 913 aa18.37■□□□□ 0.53
COL18A1-202ENST00000355480 ANKRD6Q9Y2G4 727 aa18.37■□□□□ 0.53
COL18A1-202ENST00000355480 NDUFAF1Q9Y375 327 aa18.37■□□□□ 0.53
COL18A1-202ENST00000355480 NCOA3Q9Y6Q9 1424 aa18.37■□□□□ 0.53
COL18A1-202ENST00000355480 CYP1A1P04798 512 aaPredicted RBP18.36■□□□□ 0.53
COL18A1-202ENST00000355480 PABPC1P11940 636 aaKnown RBP18.36■□□□□ 0.53
COL18A1-202ENST00000355480 PTPN1P18031 435 aaKnown RBP18.36■□□□□ 0.53
COL18A1-202ENST00000355480 CELF3Q5SZQ8 465 aaKnown RBP18.36■□□□□ 0.53
COL18A1-202ENST00000355480 CYB5D1Q6P9G0 228 aa18.36■□□□□ 0.53
COL18A1-202ENST00000355480 VTI1BQ9UEU0 232 aa18.36■□□□□ 0.53
COL18A1-202ENST00000355480 PRKAG3Q9UGI9 489 aa18.36■□□□□ 0.53
COL18A1-202ENST00000355480 MOXD2PA6NHM9 499 aa18.36■□□□□ 0.53
COL18A1-202ENST00000355480 SSTR1P30872 391 aa18.36■□□□□ 0.53
COL18A1-202ENST00000355480 IL5RAQ01344 420 aa18.36■□□□□ 0.53
COL18A1-202ENST00000355480 CYP2A13Q16696 494 aa18.36■□□□□ 0.53
COL18A1-202ENST00000355480 WSCD1Q658N2 575 aa18.36■□□□□ 0.53
COL18A1-202ENST00000355480 CES5AQ6NT32 575 aa18.36■□□□□ 0.53
COL18A1-202ENST00000355480 CYP20A1Q6UW02 462 aa18.36■□□□□ 0.53
COL18A1-202ENST00000355480 TMEM26Q6ZUK4 368 aa18.36■□□□□ 0.53
COL18A1-202ENST00000355480 TPD52L3Q96J77 140 aa18.36■□□□□ 0.53
COL18A1-202ENST00000355480 ZNF558Q96NG5 402 aa18.36■□□□□ 0.53
COL18A1-202ENST00000355480 OMDQ99983 421 aa18.36■□□□□ 0.53
COL18A1-202ENST00000355480 CDHR5Q9HBB8 845 aa18.36■□□□□ 0.53
COL18A1-202ENST00000355480 LRRC4BQ9NT99 713 aa18.36■□□□□ 0.53
COL18A1-202ENST00000355480 NRCAMQ92823 1304 aa18.36■□□□□ 0.53
COL18A1-202ENST00000355480 SAC3D1A6NKF1 404 aa18.36■□□□□ 0.53
COL18A1-202ENST00000355480 FAM45BPQ6NSW5 357 aa18.36■□□□□ 0.53
COL18A1-202ENST00000355480 POMGNT2Q8NAT1 580 aa18.36■□□□□ 0.53
COL18A1-202ENST00000355480 VAT1Q99536 393 aa18.36■□□□□ 0.53
COL18A1-202ENST00000355480 PORCNQ9H237 461 aa18.36■□□□□ 0.53
COL18A1-202ENST00000355480 STK39Q9UEW8 545 aa18.36■□□□□ 0.53
COL18A1-202ENST00000355480 CCDC154A6NI56 674 aa18.36■□□□□ 0.53
COL18A1-202ENST00000355480 SLC12A3P55017 1021 aa18.36■□□□□ 0.53
COL18A1-202ENST00000355480 CRY1Q16526 586 aa18.36■□□□□ 0.53
COL18A1-202ENST00000355480 WDR59Q6PJI9 974 aa18.36■□□□□ 0.53
COL18A1-202ENST00000355480 CCDC149Q6ZUS6 474 aa18.36■□□□□ 0.53
COL18A1-202ENST00000355480 DTNBP1Q96EV8 351 aa18.36■□□□□ 0.53
COL18A1-202ENST00000355480 NSMCE2Q96MF7 247 aa18.36■□□□□ 0.53
COL18A1-202ENST00000355480 PHACTR1Q9C0D0 580 aa18.36■□□□□ 0.53
COL18A1-202ENST00000355480 AKAP7Q9P0M2 348 aaPredicted RBP18.36■□□□□ 0.53
COL18A1-202ENST00000355480 PDP2Q9P2J9 529 aa18.36■□□□□ 0.53
COL18A1-202ENST00000355480 CRYL1Q9Y2S2 319 aa18.36■□□□□ 0.53
COL18A1-202ENST00000355480 ENO2P09104 434 aaPredicted RBP18.36■□□□□ 0.53
COL18A1-202ENST00000355480 ZCWPW2Q504Y3 356 aa18.36■□□□□ 0.53
COL18A1-202ENST00000355480 RIOX2Q8IUF8 465 aa18.36■□□□□ 0.53
COL18A1-202ENST00000355480 ZNF557Q8N988 423 aaPredicted RBP18.36■□□□□ 0.53
COL18A1-202ENST00000355480 GRIN3AQ8TCU5 1115 aa18.36■□□□□ 0.53
COL18A1-202ENST00000355480 DNPEPQ9ULA0 475 aa18.36■□□□□ 0.53
COL18A1-202ENST00000355480 KPNB1Q14974 876 aaKnown RBP18.35■□□□□ 0.53
COL18A1-202ENST00000355480 ACAP1Q15027 740 aa18.35■□□□□ 0.53
COL18A1-202ENST00000355480 BNIPLQ7Z465 357 aa18.35■□□□□ 0.53
COL18A1-202ENST00000355480 COPS5Q92905 334 aa18.35■□□□□ 0.53
COL18A1-202ENST00000355480 POLR1DQ9Y2S0 133 aa18.35■□□□□ 0.53
COL18A1-202ENST00000355480 USP12O75317 370 aa18.35■□□□□ 0.53
COL18A1-202ENST00000355480 FASTKQ14296 549 aaKnown RBP18.35■□□□□ 0.53
COL18A1-202ENST00000355480 FAM126BQ8IXS8 530 aa18.35■□□□□ 0.53
COL18A1-202ENST00000355480 TCP10LQ8TDR4 215 aa18.35■□□□□ 0.53
COL18A1-202ENST00000355480 PPP1R13LQ8WUF5 828 aa18.35■□□□□ 0.53
COL18A1-202ENST00000355480 GEMIN8Q9NWZ8 242 aaKnown RBP18.35■□□□□ 0.53
COL18A1-202ENST00000355480 ARL15Q9NXU5 204 aa18.35■□□□□ 0.53
COL18A1-202ENST00000355480 DUSP12Q9UNI6 340 aa18.35■□□□□ 0.53
COL18A1-202ENST00000355480 STARD13Q9Y3M8 1113 aa18.35■□□□□ 0.53
COL18A1-202ENST00000355480 DIP2BQ9P265 1576 aa18.35■□□□□ 0.53
COL18A1-202ENST00000355480 FKBP1AP62942 108 aaKnown RBP18.35■□□□□ 0.53
COL18A1-202ENST00000355480 SKP1P63208 163 aa18.35■□□□□ 0.53
COL18A1-202ENST00000355480 DNAJC14Q6Y2X3 702 aaPredicted RBP18.35■□□□□ 0.53
COL18A1-202ENST00000355480 SH3GL3Q99963 347 aa18.35■□□□□ 0.53
COL18A1-202ENST00000355480 POMKQ9H5K3 350 aa18.35■□□□□ 0.53
COL18A1-202ENST00000355480 L2HGDHQ9H9P8 463 aa18.35■□□□□ 0.53
COL18A1-202ENST00000355480 RARAP10276 462 aa18.35■□□□□ 0.53
COL18A1-202ENST00000355480 RPL21P46778 160 aaKnown RBP18.35■□□□□ 0.53
COL18A1-202ENST00000355480 INSCQ1MX18 579 aa18.35■□□□□ 0.53
COL18A1-202ENST00000355480 PRAMEF19Q5SWL8 479 aa18.35■□□□□ 0.53
COL18A1-202ENST00000355480 FKBP1CQ5VVH2 108 aa18.35■□□□□ 0.53
COL18A1-202ENST00000355480 APOPT1Q96IL0 206 aa18.35■□□□□ 0.53
COL18A1-202ENST00000355480 FUT8Q9BYC5 575 aa18.35■□□□□ 0.53
COL18A1-202ENST00000355480 CROTQ9UKG9 612 aa18.35■□□□□ 0.53
COL18A1-202ENST00000355480 NR2E3Q9Y5X4 410 aa18.35■□□□□ 0.53
COL18A1-202ENST00000355480 ABCA9Q8IUA7 1624 aa18.35■□□□□ 0.53
COL18A1-202ENST00000355480 CES2O00748 559 aa18.34■□□□□ 0.53
COL18A1-202ENST00000355480 RBL1P28749 1068 aa18.34■□□□□ 0.53
COL18A1-202ENST00000355480 SERPINH1P50454 418 aaKnown RBP18.34■□□□□ 0.53
COL18A1-202ENST00000355480 PRKAA2P54646 552 aa18.34■□□□□ 0.53
COL18A1-202ENST00000355480 COMMD2Q86X83 199 aa18.34■□□□□ 0.53
COL18A1-202ENST00000355480 C2orf49Q9BVC5 232 aaPredicted RBP18.34■□□□□ 0.53
COL18A1-202ENST00000355480 KLHL4Q9C0H6 718 aa18.34■□□□□ 0.53
COL18A1-202ENST00000355480 AVENQ9NQS1 362 aaPredicted RBP18.34■□□□□ 0.53
COL18A1-202ENST00000355480 OPTCQ9UBM4 332 aa18.34■□□□□ 0.53
COL18A1-202ENST00000355480 MSRAQ9UJ68 235 aa18.34■□□□□ 0.53
COL18A1-202ENST00000355480 PIK3C2BO00750 1634 aa18.34■□□□□ 0.53
COL18A1-202ENST00000355480 TRAV19A0A0A6YYK7 116 aa18.34■□□□□ 0.53
COL18A1-202ENST00000355480 MSCO60682 206 aa18.34■□□□□ 0.53
COL18A1-202ENST00000355480 SCTRP47872 440 aa18.34■□□□□ 0.53
COL18A1-202ENST00000355480 IRX1P78414 480 aaPredicted RBP18.34■□□□□ 0.53
COL18A1-202ENST00000355480 MACC1Q6ZN28 852 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms