RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 CYP1B1Q16678 543 aa12.59□□□□□ -0.39
COLCA1-201ENST00000355430 FNBP1LQ5T0N5 605 aa12.59□□□□□ -0.39
COLCA1-201ENST00000355430 KCNT2Q6UVM3 1135 aa12.59□□□□□ -0.39
COLCA1-201ENST00000355430 ULK4Q96C45 1275 aa12.59□□□□□ -0.39
COLCA1-201ENST00000355430 MAML3Q96JK9 1138 aa12.59□□□□□ -0.39
COLCA1-201ENST00000355430 CYP4F12Q9HCS2 524 aa12.59□□□□□ -0.39
COLCA1-201ENST00000355430 EVA1BQ9NVM1 165 aa12.59□□□□□ -0.39
COLCA1-201ENST00000355430 UBP1Q9NZI7 540 aa12.59□□□□□ -0.39
COLCA1-201ENST00000355430 NCKAP1Q9Y2A7 1128 aa12.59□□□□□ -0.39
COLCA1-201ENST00000355430 TPST1O60507 370 aa12.59□□□□□ -0.39
COLCA1-201ENST00000355430 PMPCBO75439 489 aa12.59□□□□□ -0.39
COLCA1-201ENST00000355430 ANPEPP15144 967 aa12.59□□□□□ -0.39
COLCA1-201ENST00000355430 CD52P31358 61 aa12.59□□□□□ -0.39
COLCA1-201ENST00000355430 MAP3K7CLP57077 242 aa12.59□□□□□ -0.39
COLCA1-201ENST00000355430 CRADDP78560 199 aa12.59□□□□□ -0.39
COLCA1-201ENST00000355430 BBS12Q6ZW61 710 aa12.59□□□□□ -0.39
COLCA1-201ENST00000355430 GFM2Q969S9 779 aaKnown RBP12.59□□□□□ -0.39
COLCA1-201ENST00000355430 CNDP1Q96KN2 507 aa12.59□□□□□ -0.39
COLCA1-201ENST00000355430 ASAH2Q9NR71 780 aa12.59□□□□□ -0.39
COLCA1-201ENST00000355430 NDUFA13Q9P0J0 144 aa12.59□□□□□ -0.39
COLCA1-201ENST00000355430 WRAP73Q9P2S5 460 aaPredicted RBP12.59□□□□□ -0.39
COLCA1-201ENST00000355430 MRPS23Q9Y3D9 190 aaKnown RBP12.59□□□□□ -0.39
COLCA1-201ENST00000355430 TCRBV9S1A1TA0A576 114 aa12.59□□□□□ -0.39
COLCA1-201ENST00000355430 PRR23AA6NEV1 266 aa12.59□□□□□ -0.39
COLCA1-201ENST00000355430 TMEM191CA6NGB0 347 aa12.59□□□□□ -0.39
COLCA1-201ENST00000355430 ZW10O43264 779 aa12.59□□□□□ -0.39
COLCA1-201ENST00000355430 LZTS3O60299 673 aaPredicted RBP12.59□□□□□ -0.39
COLCA1-201ENST00000355430 YWHAQP27348 245 aa12.59□□□□□ -0.39
COLCA1-201ENST00000355430 MPP3Q13368 585 aa12.59□□□□□ -0.39
COLCA1-201ENST00000355430 OASLQ15646 514 aaKnown RBP12.59□□□□□ -0.39
COLCA1-201ENST00000355430 LRRC8DQ7L1W4 858 aa12.59□□□□□ -0.39
COLCA1-201ENST00000355430 CLNKQ7Z7G1 428 aa12.59□□□□□ -0.39
COLCA1-201ENST00000355430 RNF148Q8N7C7 305 aa12.59□□□□□ -0.39
COLCA1-201ENST00000355430 KYQ8NBH2 561 aa12.59□□□□□ -0.39
COLCA1-201ENST00000355430 SNRNP27Q8WVK2 155 aaKnown RBP12.59□□□□□ -0.39
COLCA1-201ENST00000355430 SMARCD1Q96GM5 515 aa12.59□□□□□ -0.39
COLCA1-201ENST00000355430 MPP4Q96JB8 637 aa12.59□□□□□ -0.39
COLCA1-201ENST00000355430 MBOAT7Q96N66 472 aa12.59□□□□□ -0.39
COLCA1-201ENST00000355430 VANGL2Q9ULK5 521 aa12.59□□□□□ -0.39
COLCA1-201ENST00000355430 CNTNAP2Q9UHC6 1331 aa12.59□□□□□ -0.39
COLCA1-201ENST00000355430 HOXD13P35453 343 aa12.59□□□□□ -0.39
COLCA1-201ENST00000355430 POLNQ7Z5Q5 900 aa12.59□□□□□ -0.39
COLCA1-201ENST00000355430 TLE6Q9H808 572 aa12.59□□□□□ -0.39
COLCA1-201ENST00000355430 TMEM247A6NEH6 219 aa12.59□□□□□ -0.39
COLCA1-201ENST00000355430 GP5P40197 560 aa12.59□□□□□ -0.39
COLCA1-201ENST00000355430 SPIRE1Q08AE8 756 aa12.59□□□□□ -0.39
COLCA1-201ENST00000355430 BST2Q10589 180 aaKnown RBP12.59□□□□□ -0.39
COLCA1-201ENST00000355430 STX5Q13190 355 aa12.59□□□□□ -0.39
COLCA1-201ENST00000355430 C6orf89Q6UWU4 347 aa12.59□□□□□ -0.39
COLCA1-201ENST00000355430 MFN1Q8IWA4 741 aa12.59□□□□□ -0.39
COLCA1-201ENST00000355430 BRI3BPQ8WY22 251 aa12.59□□□□□ -0.39
COLCA1-201ENST00000355430 ZNF317Q96PQ6 595 aaPredicted RBP12.59□□□□□ -0.39
COLCA1-201ENST00000355430 KCNA2P16389 499 aa12.58□□□□□ -0.4
COLCA1-201ENST00000355430 TPH1P17752 444 aa12.58□□□□□ -0.4
COLCA1-201ENST00000355430 SCNN1GP51170 649 aa12.58□□□□□ -0.4
COLCA1-201ENST00000355430 NME5P56597 212 aa12.58□□□□□ -0.4
COLCA1-201ENST00000355430 FPGSQ05932 587 aa12.58□□□□□ -0.4
COLCA1-201ENST00000355430 IMPG1Q17R60 797 aa12.58□□□□□ -0.4
COLCA1-201ENST00000355430 PLEKHA7Q6IQ23 1121 aa12.58□□□□□ -0.4
COLCA1-201ENST00000355430 KYAT3Q6YP21 454 aaKnown RBP12.58□□□□□ -0.4
COLCA1-201ENST00000355430 LINC00523Q86TU6 105 aa12.58□□□□□ -0.4
COLCA1-201ENST00000355430 ZNF786Q8N393 782 aa12.58□□□□□ -0.4
COLCA1-201ENST00000355430 JOSD2Q8TAC2 188 aa12.58□□□□□ -0.4
COLCA1-201ENST00000355430 TBCBQ99426 244 aa12.58□□□□□ -0.4
COLCA1-201ENST00000355430 SIKE1Q9BRV8 207 aa12.58□□□□□ -0.4
COLCA1-201ENST00000355430 AFF4Q9UHB7 1163 aaKnown RBP12.58□□□□□ -0.4
COLCA1-201ENST00000355430 ST3GAL5Q9UNP4 418 aa12.58□□□□□ -0.4
COLCA1-201ENST00000355430 SMIM35A0A1B0GVV1 85 aa12.58□□□□□ -0.4
COLCA1-201ENST00000355430 ZMPSTE24O75844 475 aa12.58□□□□□ -0.4
COLCA1-201ENST00000355430 HSPA1AP0DMV8 641 aaKnown RBP12.58□□□□□ -0.4
COLCA1-201ENST00000355430 HSPA1BP0DMV9 641 aaKnown RBP12.58□□□□□ -0.4
COLCA1-201ENST00000355430 FOXN2P32314 431 aa12.58□□□□□ -0.4
COLCA1-201ENST00000355430 PTK2BQ14289 1009 aa12.58□□□□□ -0.4
COLCA1-201ENST00000355430 ACAP1Q15027 740 aa12.58□□□□□ -0.4
COLCA1-201ENST00000355430 CCDC153Q494R4 210 aa12.58□□□□□ -0.4
COLCA1-201ENST00000355430 GRTP1Q5TC63 336 aa12.58□□□□□ -0.4
COLCA1-201ENST00000355430 TTC33Q6PID6 262 aaPredicted RBP12.58□□□□□ -0.4
COLCA1-201ENST00000355430 RINLQ6ZS11 566 aa12.58□□□□□ -0.4
COLCA1-201ENST00000355430 DSG4Q86SJ6 1040 aa12.58□□□□□ -0.4
COLCA1-201ENST00000355430 EFCAB3Q8N7B9 438 aa12.58□□□□□ -0.4
COLCA1-201ENST00000355430 GPR63Q9BZJ6 419 aa12.58□□□□□ -0.4
COLCA1-201ENST00000355430 PHACTR1Q9C0D0 580 aa12.58□□□□□ -0.4
COLCA1-201ENST00000355430 TMEM134Q9H6X4 195 aa12.58□□□□□ -0.4
COLCA1-201ENST00000355430 VPS28Q9UK41 221 aa12.58□□□□□ -0.4
COLCA1-201ENST00000355430 SLC13A4Q9UKG4 626 aa12.58□□□□□ -0.4
COLCA1-201ENST00000355430 TIMM13Q9Y5L4 95 aaPredicted RBP12.58□□□□□ -0.4
COLCA1-201ENST00000355430 RECQL4O94761 1208 aa12.58□□□□□ -0.4
COLCA1-201ENST00000355430 CCNE2O96020 404 aa12.58□□□□□ -0.4
COLCA1-201ENST00000355430 CCL5P13501 91 aa12.58□□□□□ -0.4
COLCA1-201ENST00000355430 DDX5P17844 614 aaKnown RBP12.58□□□□□ -0.4
COLCA1-201ENST00000355430 MLH1P40692 756 aa12.58□□□□□ -0.4
COLCA1-201ENST00000355430 FAM183BPQ6ZVS7 135 aa12.58□□□□□ -0.4
COLCA1-201ENST00000355430 LENG9Q96B70 501 aa12.58□□□□□ -0.4
COLCA1-201ENST00000355430 DMAP1Q9NPF5 467 aaPredicted RBP12.58□□□□□ -0.4
COLCA1-201ENST00000355430 SPG21Q9NZD8 308 aa12.58□□□□□ -0.4
COLCA1-201ENST00000355430 PCDHA11Q9Y5I1 949 aa12.58□□□□□ -0.4
COLCA1-201ENST00000355430 LRP6O75581 1613 aa12.58□□□□□ -0.4
COLCA1-201ENST00000355430 SUPT3HB4E1H0 165 aa12.58□□□□□ -0.4
COLCA1-201ENST00000355430 RNF103O00237 685 aa12.58□□□□□ -0.4
COLCA1-201ENST00000355430 LYPLA2O95372 231 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms