RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 RNF34Q969K3 372 aa17.67■□□□□ 0.42
VPS13B-201ENST00000355155 SLC27A5Q9Y2P5 690 aa17.67■□□□□ 0.42
VPS13B-201ENST00000355155 ANAPC1Q9H1A4 1944 aa17.67■□□□□ 0.42
VPS13B-201ENST00000355155 CENPFP49454 3210 aa17.67■□□□□ 0.42
VPS13B-201ENST00000355155 MSI1O43347 362 aaKnown RBP17.67■□□□□ 0.42
VPS13B-201ENST00000355155 C1RP00736 705 aa17.67■□□□□ 0.42
VPS13B-201ENST00000355155 DNAJB2P25686 324 aa17.67■□□□□ 0.42
VPS13B-201ENST00000355155 ELK3P41970 407 aa17.67■□□□□ 0.42
VPS13B-201ENST00000355155 LMAN1P49257 510 aa17.67■□□□□ 0.42
VPS13B-201ENST00000355155 CDR1P51861 262 aa17.67■□□□□ 0.42
VPS13B-201ENST00000355155 GEMIN4P57678 1058 aaKnown RBP17.67■□□□□ 0.42
VPS13B-201ENST00000355155 MS4A13Q5J8X5 152 aa17.67■□□□□ 0.42
VPS13B-201ENST00000355155 NUGGCQ68CJ6 796 aa17.67■□□□□ 0.42
VPS13B-201ENST00000355155 IGDCC3Q8IVU1 814 aa17.67■□□□□ 0.42
VPS13B-201ENST00000355155 TCEAL8Q8IYN2 117 aa17.67■□□□□ 0.42
VPS13B-201ENST00000355155 MZB1Q8WU39 189 aa17.67■□□□□ 0.42
VPS13B-201ENST00000355155 CLP1Q92989 425 aaKnown RBP17.67■□□□□ 0.42
VPS13B-201ENST00000355155 TEKT5Q96M29 485 aa17.67■□□□□ 0.42
VPS13B-201ENST00000355155 SSX2IPQ9Y2D8 614 aa17.67■□□□□ 0.42
VPS13B-201ENST00000355155 ALDH1A2O94788 518 aa17.67■□□□□ 0.42
VPS13B-201ENST00000355155 APOEP02649 317 aa17.67■□□□□ 0.42
VPS13B-201ENST00000355155 STX2P32856 288 aa17.67■□□□□ 0.42
VPS13B-201ENST00000355155 OR1D2P34982 312 aa17.67■□□□□ 0.42
VPS13B-201ENST00000355155 C1QTNF8P60827 252 aa17.67■□□□□ 0.42
VPS13B-201ENST00000355155 AP1B1Q10567 949 aa17.67■□□□□ 0.42
VPS13B-201ENST00000355155 ITPRIPL1Q6GPH6 555 aa17.67■□□□□ 0.42
VPS13B-201ENST00000355155 CCDC117Q8IWD4 279 aaPredicted RBP17.67■□□□□ 0.42
VPS13B-201ENST00000355155 SEPT5Q99719 369 aaPredicted RBP17.67■□□□□ 0.42
VPS13B-201ENST00000355155 EBNA1BP2Q99848 306 aaKnown RBP17.67■□□□□ 0.42
VPS13B-201ENST00000355155 ZNF180Q9UJW8 692 aa17.67■□□□□ 0.42
VPS13B-201ENST00000355155 TTLL3Q9Y4R7 772 aa17.67■□□□□ 0.42
VPS13B-201ENST00000355155 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.67■□□□□ 0.42
VPS13B-201ENST00000355155 AP3B1O00203 1094 aa17.66■□□□□ 0.42
VPS13B-201ENST00000355155 MAP3K6O95382 1288 aa17.66■□□□□ 0.42
VPS13B-201ENST00000355155 SEC24AO95486 1093 aa17.66■□□□□ 0.42
VPS13B-201ENST00000355155 AP2A1O95782 977 aa17.66■□□□□ 0.42
VPS13B-201ENST00000355155 TIGD7Q6NT04 549 aaPredicted RBP17.66■□□□□ 0.42
VPS13B-201ENST00000355155 TP53INP2Q8IXH6 220 aa17.66■□□□□ 0.42
VPS13B-201ENST00000355155 NAT9Q9BTE0 207 aa17.66■□□□□ 0.42
VPS13B-201ENST00000355155 MARCH2Q9P0N8 246 aa17.66■□□□□ 0.42
VPS13B-201ENST00000355155 PSMC3IPQ9P2W1 217 aaPredicted RBP17.66■□□□□ 0.42
VPS13B-201ENST00000355155 EXOC1LA0A1B0GW35 172 aa17.66■□□□□ 0.42
VPS13B-201ENST00000355155 GOLGA8MH3BSY2 632 aa17.66■□□□□ 0.42
VPS13B-201ENST00000355155 MAFKO60675 156 aa17.66■□□□□ 0.42
VPS13B-201ENST00000355155 CD68P34810 354 aaPredicted RBP17.66■□□□□ 0.42
VPS13B-201ENST00000355155 C3orf62Q6ZUJ4 267 aa17.66■□□□□ 0.42
VPS13B-201ENST00000355155 C14orf80Q86SX3 495 aa17.66■□□□□ 0.42
VPS13B-201ENST00000355155 TRABD2AQ86V40 505 aa17.66■□□□□ 0.42
VPS13B-201ENST00000355155 TMEM169Q96HH4 297 aa17.66■□□□□ 0.42
VPS13B-201ENST00000355155 DENND4CQ5VZ89 1909 aa17.65■□□□□ 0.42
VPS13B-201ENST00000355155 MATN3O15232 486 aa17.65■□□□□ 0.42
VPS13B-201ENST00000355155 PRPF4O43172 522 aaKnown RBP eCLIP17.65■□□□□ 0.424e-6■■■□□ 16.7
VPS13B-201ENST00000355155 UPP2O95045 317 aa17.65■□□□□ 0.42
VPS13B-201ENST00000355155 APRTP07741 180 aa17.65■□□□□ 0.42
VPS13B-201ENST00000355155 LSP1P33241 339 aa17.65■□□□□ 0.42
VPS13B-201ENST00000355155 GNGT1P63211 74 aa17.65■□□□□ 0.42
VPS13B-201ENST00000355155 BBS9Q3SYG4 887 aa17.65■□□□□ 0.42
VPS13B-201ENST00000355155 UHMK1Q8TAS1 419 aaKnown RBP17.65■□□□□ 0.42
VPS13B-201ENST00000355155 DCAKDQ8WVC6 231 aa17.65■□□□□ 0.42
VPS13B-201ENST00000355155 ATXN2LQ8WWM7 1075 aaKnown RBP17.65■□□□□ 0.42
VPS13B-201ENST00000355155 ARHGEF2Q92974 986 aaKnown RBP17.65■□□□□ 0.42
VPS13B-201ENST00000355155 PLD4Q96BZ4 506 aa17.65■□□□□ 0.42
VPS13B-201ENST00000355155 ZBP1Q9H171 429 aa17.65■□□□□ 0.42
VPS13B-201ENST00000355155 CASS4Q9NQ75 786 aa17.65■□□□□ 0.42
VPS13B-201ENST00000355155 BCCIPQ9P287 314 aaKnown RBP eCLIP17.65■□□□□ 0.423e-8■■■■■ 27.3
VPS13B-201ENST00000355155 PCDHA11Q9Y5I1 949 aa17.65■□□□□ 0.42
VPS13B-201ENST00000355155 LATS1O95835 1130 aa17.65■□□□□ 0.42
VPS13B-201ENST00000355155 RAG1P15918 1043 aa17.65■□□□□ 0.42
VPS13B-201ENST00000355155 PPIGQ13427 754 aaKnown RBP eCLIP17.65■□□□□ 0.422e-6■■■□□ 15.9
VPS13B-201ENST00000355155 LRRC31Q6UY01 552 aa17.65■□□□□ 0.42
VPS13B-201ENST00000355155 PALM2Q8IXS6 379 aa17.65■□□□□ 0.42
VPS13B-201ENST00000355155 CYP4X1Q8N118 509 aa17.65■□□□□ 0.42
VPS13B-201ENST00000355155 SLC44A1Q8WWI5 657 aa17.65■□□□□ 0.42
VPS13B-201ENST00000355155 CYTH2Q99418 400 aa17.65■□□□□ 0.42
VPS13B-201ENST00000355155 ZYG11BQ9C0D3 744 aa17.65■□□□□ 0.42
VPS13B-201ENST00000355155 NOL6Q9H6R4 1146 aaKnown RBP17.65■□□□□ 0.42
VPS13B-201ENST00000355155 STOML2Q9UJZ1 356 aa17.65■□□□□ 0.42
VPS13B-201ENST00000355155 TLDC2A0PJX2 215 aa17.64■□□□□ 0.41
VPS13B-201ENST00000355155 ZNF840PA6NDX5 716 aa17.64■□□□□ 0.41
VPS13B-201ENST00000355155 BANF1O75531 89 aa17.64■□□□□ 0.41
VPS13B-201ENST00000355155 SOAT2O75908 522 aa17.64■□□□□ 0.41
VPS13B-201ENST00000355155 NAB1Q13506 487 aa17.64■□□□□ 0.41
VPS13B-201ENST00000355155 BTG3Q14201 252 aaPredicted RBP17.64■□□□□ 0.41
VPS13B-201ENST00000355155 C16orf59Q7L2K0 433 aa17.64■□□□□ 0.41
VPS13B-201ENST00000355155 ANKMY2Q8IV38 441 aa17.64■□□□□ 0.41
VPS13B-201ENST00000355155 FBF1Q8TES7 1133 aa17.64■□□□□ 0.41
VPS13B-201ENST00000355155 ZBTB9Q96C00 473 aa17.64■□□□□ 0.41
VPS13B-201ENST00000355155 FCRL5Q96RD9 977 aa17.64■□□□□ 0.41
VPS13B-201ENST00000355155 EPN3Q9H201 632 aa17.64■□□□□ 0.41
VPS13B-201ENST00000355155 CENPHQ9H3R5 247 aa17.64■□□□□ 0.41
VPS13B-201ENST00000355155 VPS37BQ9H9H4 285 aa17.64■□□□□ 0.41
VPS13B-201ENST00000355155 DNMT3LQ9UJW3 386 aa17.64■□□□□ 0.41
VPS13B-201ENST00000355155 YIPF1Q9Y548 306 aa17.64■□□□□ 0.41
VPS13B-201ENST00000355155 PCNTO95613 3336 aa17.64■□□□□ 0.41
VPS13B-201ENST00000355155 SSTR1P30872 391 aa17.64■□□□□ 0.41
VPS13B-201ENST00000355155 MAPKAPK2P49137 400 aa17.64■□□□□ 0.41
VPS13B-201ENST00000355155 ARPP19P56211 112 aa17.64■□□□□ 0.41
VPS13B-201ENST00000355155 ZBTB17Q13105 803 aa17.64■□□□□ 0.41
VPS13B-201ENST00000355155 XPO6Q96QU8 1125 aaKnown RBP17.64■□□□□ 0.41
VPS13B-201ENST00000355155 SLC39A8Q9C0K1 460 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms