RNA–Protein interactions for RNA: ENST00000354537.1

CAPN9-202, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-202ENST00000354537 OR6B1O95007 311 aa11.69□□□□□ -0.54
CAPN9-202ENST00000354537 STAG3L1P0CL83 205 aa11.69□□□□□ -0.54
CAPN9-202ENST00000354537 RANBP1P43487 201 aa11.69□□□□□ -0.54
CAPN9-202ENST00000354537 SLC26A2P50443 739 aa11.69□□□□□ -0.54
CAPN9-202ENST00000354537 LIMK2P53671 638 aa11.69□□□□□ -0.54
CAPN9-202ENST00000354537 ZNF280AP59817 542 aaPredicted RBP11.69□□□□□ -0.54
CAPN9-202ENST00000354537 MBTD1Q05BQ5 628 aa11.69□□□□□ -0.54
CAPN9-202ENST00000354537 GOLGA7BQ2TAP0 167 aa11.69□□□□□ -0.54
CAPN9-202ENST00000354537 PPP6R3Q5H9R7 873 aaPredicted RBP11.69□□□□□ -0.54
CAPN9-202ENST00000354537 VWA5B1Q5TIE3 1220 aa11.69□□□□□ -0.54
CAPN9-202ENST00000354537 JADE1Q6IE81 842 aa11.69□□□□□ -0.54
CAPN9-202ENST00000354537 NIM1KQ8IY84 436 aa11.69□□□□□ -0.54
CAPN9-202ENST00000354537 TTLL6Q8N841 843 aa11.69□□□□□ -0.54
CAPN9-202ENST00000354537 COLGALT1Q8NBJ5 622 aa11.69□□□□□ -0.54
CAPN9-202ENST00000354537 TRPC4APQ8TEL6 797 aa11.69□□□□□ -0.54
CAPN9-202ENST00000354537 SLC35F5Q8WV83 523 aa11.69□□□□□ -0.54
CAPN9-202ENST00000354537 KBTBD7Q8WVZ9 684 aa11.69□□□□□ -0.54
CAPN9-202ENST00000354537 PIWIL1Q96J94 861 aaKnown RBP11.69□□□□□ -0.54
CAPN9-202ENST00000354537 SLC2A11Q9BYW1 496 aa11.69□□□□□ -0.54
CAPN9-202ENST00000354537 MRPL40Q9NQ50 206 aaKnown RBP11.69□□□□□ -0.54
CAPN9-202ENST00000354537 IRAK4Q9NWZ3 460 aa11.69□□□□□ -0.54
CAPN9-202ENST00000354537 GGA3Q9NZ52 723 aa11.69□□□□□ -0.54
CAPN9-202ENST00000354537 IGSF9Q9P2J2 1179 aa11.69□□□□□ -0.54
CAPN9-202ENST00000354537 RAP2CQ9Y3L5 183 aa11.69□□□□□ -0.54
CAPN9-202ENST00000354537 AP4B1Q9Y6B7 739 aa11.69□□□□□ -0.54
CAPN9-202ENST00000354537 ZBTB42B2RXF5 422 aa11.68□□□□□ -0.54
CAPN9-202ENST00000354537 MATN2O00339 956 aa11.68□□□□□ -0.54
CAPN9-202ENST00000354537 BCAS2O75934 225 aaPredicted RBP11.68□□□□□ -0.54
CAPN9-202ENST00000354537 SRGAP2BP0DMP2 458 aa11.68□□□□□ -0.54
CAPN9-202ENST00000354537 PTPRAP18433 802 aa11.68□□□□□ -0.54
CAPN9-202ENST00000354537 MGAT1P26572 445 aa11.68□□□□□ -0.54
CAPN9-202ENST00000354537 CSE1LP55060 971 aaKnown RBP11.68□□□□□ -0.54
CAPN9-202ENST00000354537 OSTNP61366 133 aa11.68□□□□□ -0.54
CAPN9-202ENST00000354537 CYLC2Q14093 348 aaPredicted RBP11.68□□□□□ -0.54
CAPN9-202ENST00000354537 FLOT2Q14254 428 aa11.68□□□□□ -0.54
CAPN9-202ENST00000354537 NADK2Q4G0N4 442 aa11.68□□□□□ -0.54
CAPN9-202ENST00000354537 SLC9B1Q4ZJI4 515 aa11.68□□□□□ -0.54
CAPN9-202ENST00000354537 NCBP2-AS2Q69YL0 99 aa11.68□□□□□ -0.54
CAPN9-202ENST00000354537 SLC26A9Q7LBE3 791 aa11.68□□□□□ -0.54
CAPN9-202ENST00000354537 DSELQ8IZU8 1212 aa11.68□□□□□ -0.54
CAPN9-202ENST00000354537 CNTD1Q8N815 330 aa11.68□□□□□ -0.54
CAPN9-202ENST00000354537 ZNF781Q8N8C0 355 aa11.68□□□□□ -0.54
CAPN9-202ENST00000354537 TDRD5Q8NAT2 981 aaKnown RBP11.68□□□□□ -0.54
CAPN9-202ENST00000354537 HIPK4Q8NE63 616 aa11.68□□□□□ -0.54
CAPN9-202ENST00000354537 HAUS8Q9BT25 410 aa11.68□□□□□ -0.54
CAPN9-202ENST00000354537 OCEL1Q9H607 264 aa11.68□□□□□ -0.54
CAPN9-202ENST00000354537 ZNF385DQ9H6B1 395 aa11.68□□□□□ -0.54
CAPN9-202ENST00000354537 HSFX1Q9UBD0 423 aa11.68□□□□□ -0.54
CAPN9-202ENST00000354537 AP4E1Q9UPM8 1137 aa11.68□□□□□ -0.54
CAPN9-202ENST00000354537 USP3Q9Y6I4 520 aa11.68□□□□□ -0.54
CAPN9-202ENST00000354537 COL4A5P29400 1685 aa11.68□□□□□ -0.54
CAPN9-202ENST00000354537 LCTP09848 1927 aa11.68□□□□□ -0.54
CAPN9-202ENST00000354537 INO80B-WBP1J3KQ70 363 aa11.68□□□□□ -0.54
CAPN9-202ENST00000354537 HDAC3O15379 428 aa11.68□□□□□ -0.54
CAPN9-202ENST00000354537 GRAP2O75791 330 aa11.68□□□□□ -0.54
CAPN9-202ENST00000354537 PGM3O95394 542 aa11.68□□□□□ -0.54
CAPN9-202ENST00000354537 ME2P23368 584 aa11.68□□□□□ -0.54
CAPN9-202ENST00000354537 RPL34P49207 117 aaKnown RBP11.68□□□□□ -0.54
CAPN9-202ENST00000354537 TMEM132AQ24JP5 1023 aa11.68□□□□□ -0.54
CAPN9-202ENST00000354537 PMF1Q6P1K2 205 aa11.68□□□□□ -0.54
CAPN9-202ENST00000354537 STRADAQ7RTN6 431 aa11.68□□□□□ -0.54
CAPN9-202ENST00000354537 ZNF410Q86VK4 478 aa11.68□□□□□ -0.54
CAPN9-202ENST00000354537 IFNLR1Q8IU57 520 aaPredicted RBP11.68□□□□□ -0.54
CAPN9-202ENST00000354537 UNC5BQ8IZJ1 945 aa11.68□□□□□ -0.54
CAPN9-202ENST00000354537 TOP1MTQ969P6 601 aa11.68□□□□□ -0.54
CAPN9-202ENST00000354537 KCTD15Q96SI1 283 aaPredicted RBP11.68□□□□□ -0.54
CAPN9-202ENST00000354537 DRC3Q9H069 523 aa11.68□□□□□ -0.54
CAPN9-202ENST00000354537 DHX35Q9H5Z1 703 aaKnown RBP11.68□□□□□ -0.54
CAPN9-202ENST00000354537 LRRC40Q9H9A6 602 aa11.68□□□□□ -0.54
CAPN9-202ENST00000354537 PICK1Q9NRD5 415 aa11.68□□□□□ -0.54
CAPN9-202ENST00000354537 OXSMQ9NWU1 459 aa11.68□□□□□ -0.54
CAPN9-202ENST00000354537 ANKRD6Q9Y2G4 727 aa11.68□□□□□ -0.54
CAPN9-202ENST00000354537 AFG3L2Q9Y4W6 797 aa11.68□□□□□ -0.54
CAPN9-202ENST00000354537 PSAT1Q9Y617 370 aa11.68□□□□□ -0.54
CAPN9-202ENST00000354537 MAGEB16A2A368 324 aa11.67□□□□□ -0.54
CAPN9-202ENST00000354537 PAPSS1O43252 624 aaPredicted RBP11.67□□□□□ -0.54
CAPN9-202ENST00000354537 TIMM44O43615 452 aa11.67□□□□□ -0.54
CAPN9-202ENST00000354537 FAM200BP0CF97 657 aa11.67□□□□□ -0.54
CAPN9-202ENST00000354537 PSMD8P48556 350 aa11.67□□□□□ -0.54
CAPN9-202ENST00000354537 NUDT2P50583 147 aa11.67□□□□□ -0.54
CAPN9-202ENST00000354537 HPCAP84074 193 aa11.67□□□□□ -0.54
CAPN9-202ENST00000354537 MYBPC1Q00872 1141 aa11.67□□□□□ -0.54
CAPN9-202ENST00000354537 DPYSQ14117 519 aa11.67□□□□□ -0.54
CAPN9-202ENST00000354537 PPM1JQ5JR12 505 aa11.67□□□□□ -0.54
CAPN9-202ENST00000354537 ARHGAP17Q68EM7 881 aa11.67□□□□□ -0.54
CAPN9-202ENST00000354537 DCLK2Q8N568 766 aa11.67□□□□□ -0.54
CAPN9-202ENST00000354537 METTL25Q8N6Q8 603 aa11.67□□□□□ -0.54
CAPN9-202ENST00000354537 ZFP28Q8NHY6 868 aa11.67□□□□□ -0.54
CAPN9-202ENST00000354537 SENP6Q9GZR1 1112 aaPredicted RBP11.67□□□□□ -0.54
CAPN9-202ENST00000354537 RNPEPQ9H4A4 650 aa11.67□□□□□ -0.54
CAPN9-202ENST00000354537 EFCAB1Q9HAE3 211 aa11.67□□□□□ -0.54
CAPN9-202ENST00000354537 CHCHD3Q9NX63 227 aaKnown RBP11.67□□□□□ -0.54
CAPN9-202ENST00000354537 UTP6Q9NYH9 597 aaKnown RBP11.67□□□□□ -0.54
CAPN9-202ENST00000354537 GNEQ9Y223 722 aaKnown RBP11.67□□□□□ -0.54
CAPN9-202ENST00000354537 E9PBE3 544 aa11.67□□□□□ -0.54
CAPN9-202ENST00000354537 B4GALT5O43286 388 aa11.67□□□□□ -0.54
CAPN9-202ENST00000354537 KLHL41O60662 606 aa11.67□□□□□ -0.54
CAPN9-202ENST00000354537 SPATA31D3P0C874 917 aa11.67□□□□□ -0.54
CAPN9-202ENST00000354537 PPARGP37231 505 aaPredicted RBP11.67□□□□□ -0.54
CAPN9-202ENST00000354537 ARL4AP40617 200 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms