RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 RNF220Q5VTB9 566 aa8.84□□□□□ -0.99
TRIM55-204ENST00000353317 CES4AQ5XG92 561 aa8.84□□□□□ -0.99
TRIM55-204ENST00000353317 SMYD5Q6GMV2 418 aa8.84□□□□□ -0.99
TRIM55-204ENST00000353317 OR52E8Q6IFG1 317 aa8.84□□□□□ -0.99
TRIM55-204ENST00000353317 IRGCQ6NXR0 463 aa8.84□□□□□ -0.99
TRIM55-204ENST00000353317 NPNTQ6UXI9 565 aa8.84□□□□□ -0.99
TRIM55-204ENST00000353317 FAM35AQ86V20 835 aa8.84□□□□□ -0.99
TRIM55-204ENST00000353317 ZC3H18Q86VM9 953 aaKnown RBP8.84□□□□□ -0.99
TRIM55-204ENST00000353317 TMEM86AQ8N2M4 240 aa8.84□□□□□ -0.99
TRIM55-204ENST00000353317 PHC3Q8NDX5 983 aa8.84□□□□□ -0.99
TRIM55-204ENST00000353317 CMASQ8NFW8 434 aaPredicted RBP8.84□□□□□ -0.99
TRIM55-204ENST00000353317 FNIP1Q8TF40 1166 aa8.84□□□□□ -0.99
TRIM55-204ENST00000353317 HSPH1Q92598 858 aa8.84□□□□□ -0.99
TRIM55-204ENST00000353317 TNIP3Q96KP6 325 aa8.84□□□□□ -0.99
TRIM55-204ENST00000353317 SRPK1Q96SB4 655 aaKnown RBP8.84□□□□□ -0.99
TRIM55-204ENST00000353317 CALN1Q9BXU9 219 aa8.84□□□□□ -0.99
TRIM55-204ENST00000353317 SEZ6LQ9BYH1 1024 aa8.84□□□□□ -0.99
TRIM55-204ENST00000353317 ELAC1Q9H777 363 aaKnown RBP8.84□□□□□ -0.99
TRIM55-204ENST00000353317 PIDD1Q9HB75 910 aa8.84□□□□□ -0.99
TRIM55-204ENST00000353317 KRT82Q9NSB4 513 aa8.84□□□□□ -0.99
TRIM55-204ENST00000353317 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.84□□□□□ -0.99
TRIM55-204ENST00000353317 HESX1Q9UBX0 185 aa8.84□□□□□ -0.99
TRIM55-204ENST00000353317 ASB3Q9Y575 518 aa8.84□□□□□ -0.99
TRIM55-204ENST00000353317 WASF2Q9Y6W5 498 aa8.84□□□□□ -0.99
TRIM55-204ENST00000353317 REV3LO60673 3130 aa8.84□□□□□ -0.99
TRIM55-204ENST00000353317 SMAPO00193 183 aa8.84□□□□□ -0.99
TRIM55-204ENST00000353317 KLF11O14901 512 aa8.84□□□□□ -0.99
TRIM55-204ENST00000353317 MCF2LO15068 1137 aa8.84□□□□□ -0.99
TRIM55-204ENST00000353317 SMIM24O75264 130 aa8.84□□□□□ -0.99
TRIM55-204ENST00000353317 IL1BP01584 269 aa8.84□□□□□ -0.99
TRIM55-204ENST00000353317 AMHP03971 560 aa8.84□□□□□ -0.99
TRIM55-204ENST00000353317 FYNP06241 537 aa8.84□□□□□ -0.99
TRIM55-204ENST00000353317 ACRP10323 421 aa8.84□□□□□ -0.99
TRIM55-204ENST00000353317 NPR3P17342 541 aa8.84□□□□□ -0.99
TRIM55-204ENST00000353317 MIPP30301 263 aa8.84□□□□□ -0.99
TRIM55-204ENST00000353317 LHX1P48742 406 aa8.84□□□□□ -0.99
TRIM55-204ENST00000353317 BCAT1P54687 386 aa8.84□□□□□ -0.99
TRIM55-204ENST00000353317 YWHAGP61981 247 aaKnown RBP eCLIP8.84□□□□□ -0.99
TRIM55-204ENST00000353317 DEFB103AP81534 67 aa8.84□□□□□ -0.99
TRIM55-204ENST00000353317 SLC6A3Q01959 620 aa8.84□□□□□ -0.99
TRIM55-204ENST00000353317 ADIGQ0VDE8 80 aa8.84□□□□□ -0.99
TRIM55-204ENST00000353317 MMRN1Q13201 1228 aa8.84□□□□□ -0.99
TRIM55-204ENST00000353317 KCNJ11Q14654 390 aa8.84□□□□□ -0.99
TRIM55-204ENST00000353317 STILQ15468 1287 aa8.84□□□□□ -0.99
TRIM55-204ENST00000353317 CDO1Q16878 200 aa8.84□□□□□ -0.99
TRIM55-204ENST00000353317 OVOS1Q6IE37 1185 aa8.84□□□□□ -0.99
TRIM55-204ENST00000353317 TREML1Q86YW5 311 aa8.84□□□□□ -0.99
TRIM55-204ENST00000353317 KBTBD2Q8IY47 623 aa8.84□□□□□ -0.99
TRIM55-204ENST00000353317 PDCD7Q8N8D1 485 aaKnown RBP8.84□□□□□ -0.99
TRIM55-204ENST00000353317 STMN2Q93045 179 aa8.84□□□□□ -0.99
TRIM55-204ENST00000353317 MYLPFQ96A32 169 aa8.84□□□□□ -0.99
TRIM55-204ENST00000353317 C11orf49Q9H6J7 331 aa8.84□□□□□ -0.99
TRIM55-204ENST00000353317 ZNF395Q9H8N7 513 aaPredicted RBP8.84□□□□□ -0.99
TRIM55-204ENST00000353317 TBKBP1A7MCY6 615 aa8.84□□□□□ -1
TRIM55-204ENST00000353317 CAPN14A8MX76 684 aa8.84□□□□□ -1
TRIM55-204ENST00000353317 CXorf49A8MYA2 514 aaPredicted RBP8.84□□□□□ -1
TRIM55-204ENST00000353317 B2RBV5 119 aa8.84□□□□□ -1
TRIM55-204ENST00000353317 H3BRJ5 948 aa8.84□□□□□ -1
TRIM55-204ENST00000353317 COPEO14579 308 aa8.84□□□□□ -1
TRIM55-204ENST00000353317 CLTBP09497 229 aa8.84□□□□□ -1
TRIM55-204ENST00000353317 PDGFRAP16234 1089 aa8.84□□□□□ -1
TRIM55-204ENST00000353317 EN2P19622 333 aaPredicted RBP8.84□□□□□ -1
TRIM55-204ENST00000353317 BDNFP23560 247 aa8.84□□□□□ -1
TRIM55-204ENST00000353317 PGM1P36871 562 aa8.84□□□□□ -1
TRIM55-204ENST00000353317 MRPS5P82675 430 aaKnown RBP8.84□□□□□ -1
TRIM55-204ENST00000353317 AP1B1Q10567 949 aa8.84□□□□□ -1
TRIM55-204ENST00000353317 FAM117BQ6P1L5 589 aa8.84□□□□□ -1
TRIM55-204ENST00000353317 C16orf59Q7L2K0 433 aa8.84□□□□□ -1
TRIM55-204ENST00000353317 BHLHA9Q7RTU4 235 aa8.84□□□□□ -1
TRIM55-204ENST00000353317 TTC9BQ8N6N2 239 aa8.84□□□□□ -1
TRIM55-204ENST00000353317 TEKT4Q8WW24 435 aa8.84□□□□□ -1
TRIM55-204ENST00000353317 IFT43Q96FT9 208 aa8.84□□□□□ -1
TRIM55-204ENST00000353317 TSC22D3Q99576 134 aa8.84□□□□□ -1
TRIM55-204ENST00000353317 MED10Q9BTT4 135 aa8.84□□□□□ -1
TRIM55-204ENST00000353317 VN1R3Q9BXE9 311 aa8.84□□□□□ -1
TRIM55-204ENST00000353317 TMPRSS4Q9NRS4 437 aa8.84□□□□□ -1
TRIM55-204ENST00000353317 CDH9Q9ULB4 789 aa8.84□□□□□ -1
TRIM55-204ENST00000353317 USP18Q9UMW8 372 aa8.84□□□□□ -1
TRIM55-204ENST00000353317 GREB1Q4ZG55 1949 aa8.83□□□□□ -1
TRIM55-204ENST00000353317 PATJQ8NI35 1801 aa8.83□□□□□ -1
TRIM55-204ENST00000353317 TRIM49D1C9J1S8 452 aa8.83□□□□□ -1
TRIM55-204ENST00000353317 XPO1O14980 1071 aaKnown RBP8.83□□□□□ -1
TRIM55-204ENST00000353317 AHCYL1O43865 530 aa8.83□□□□□ -1
TRIM55-204ENST00000353317 AP1G2O75843 785 aa8.83□□□□□ -1
TRIM55-204ENST00000353317 ENO1P06733 434 aaKnown RBP8.83□□□□□ -1
TRIM55-204ENST00000353317 GALTP07902 379 aa8.83□□□□□ -1
TRIM55-204ENST00000353317 FAM163BP0C2L3 166 aa8.83□□□□□ -1
TRIM55-204ENST00000353317 ODC1P11926 461 aa8.83□□□□□ -1
TRIM55-204ENST00000353317 ERFP50548 548 aa8.83□□□□□ -1
TRIM55-204ENST00000353317 ZNF143P52747 638 aaPredicted RBP8.83□□□□□ -1
TRIM55-204ENST00000353317 BST1Q10588 318 aa8.83□□□□□ -1
TRIM55-204ENST00000353317 INTS6LQ5JSJ4 861 aaKnown RBP8.83□□□□□ -1
TRIM55-204ENST00000353317 OTUD1Q5VV17 481 aaPredicted RBP8.83□□□□□ -1
TRIM55-204ENST00000353317 SYPL2Q5VXT5 272 aa8.83□□□□□ -1
TRIM55-204ENST00000353317 FAM91A1Q658Y4 838 aa8.83□□□□□ -1
TRIM55-204ENST00000353317 SLC26A11Q86WA9 606 aa8.83□□□□□ -1
TRIM55-204ENST00000353317 CTAGE3PQ8IX95 158 aa8.83□□□□□ -1
TRIM55-204ENST00000353317 PPM1NQ8N819 430 aa8.83□□□□□ -1
TRIM55-204ENST00000353317 RBM15BQ8NDT2 890 aaKnown RBP8.83□□□□□ -1
TRIM55-204ENST00000353317 CFAP36Q96G28 342 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms