RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 ACO2Q99798 780 aaKnown RBP13.54□□□□□ -0.24
IFT88-202ENST00000351808 FAM96AQ9H5X1 160 aa13.54□□□□□ -0.24
IFT88-202ENST00000351808 MRPL47Q9HD33 250 aaKnown RBP13.54□□□□□ -0.24
IFT88-202ENST00000351808 TOPORSQ9NS56 1045 aaPredicted RBP13.54□□□□□ -0.24
IFT88-202ENST00000351808 C20orf96Q9NUD7 363 aaPredicted RBP13.54□□□□□ -0.24
IFT88-202ENST00000351808 MRGBPQ9NV56 204 aa13.54□□□□□ -0.24
IFT88-202ENST00000351808 TMEM9Q9P0T7 183 aa13.54□□□□□ -0.24
IFT88-202ENST00000351808 VPS28Q9UK41 221 aa13.54□□□□□ -0.24
IFT88-202ENST00000351808 PSME4Q14997 1843 aa13.54□□□□□ -0.24
IFT88-202ENST00000351808 UBE4BO95155 1302 aa13.54□□□□□ -0.24
IFT88-202ENST00000351808 COL4A1P02462 1669 aa13.54□□□□□ -0.24
IFT88-202ENST00000351808 GOLGA8CPA6NN73 597 aa13.54□□□□□ -0.24
IFT88-202ENST00000351808 CHMP2AO43633 222 aa13.54□□□□□ -0.24
IFT88-202ENST00000351808 ICMTO60725 284 aa13.54□□□□□ -0.24
IFT88-202ENST00000351808 TPPPO94811 219 aa13.54□□□□□ -0.24
IFT88-202ENST00000351808 CRYZL1O95825 349 aa13.54□□□□□ -0.24
IFT88-202ENST00000351808 ADRB2P07550 413 aa13.54□□□□□ -0.24
IFT88-202ENST00000351808 IST1P53990 364 aa13.54□□□□□ -0.24
IFT88-202ENST00000351808 CLCQ05315 142 aa13.54□□□□□ -0.24
IFT88-202ENST00000351808 ART3Q13508 389 aa13.54□□□□□ -0.24
IFT88-202ENST00000351808 DPYSL3Q14195 570 aa13.54□□□□□ -0.24
IFT88-202ENST00000351808 UBE2UQ5VVX9 321 aa13.54□□□□□ -0.24
IFT88-202ENST00000351808 TMC5Q6UXY8 1006 aa13.54□□□□□ -0.24
IFT88-202ENST00000351808 GRAMD2AQ8IUY3 354 aa13.54□□□□□ -0.24
IFT88-202ENST00000351808 PGAM4Q8N0Y7 254 aa13.54□□□□□ -0.24
IFT88-202ENST00000351808 BPIFB6Q8NFQ5 453 aa13.54□□□□□ -0.24
IFT88-202ENST00000351808 LENG9Q96B70 501 aa13.54□□□□□ -0.24
IFT88-202ENST00000351808 FAM84AQ96KN4 292 aa13.54□□□□□ -0.24
IFT88-202ENST00000351808 ADA2Q9NZK5 511 aa13.54□□□□□ -0.24
IFT88-202ENST00000351808 HSPBP1Q9NZL4 362 aa13.54□□□□□ -0.24
IFT88-202ENST00000351808 TXNDC16Q9P2K2 825 aa13.54□□□□□ -0.24
IFT88-202ENST00000351808 NHSL1Q5SYE7 1610 aa13.54□□□□□ -0.24
IFT88-202ENST00000351808 K7ENM7 598 aa13.54□□□□□ -0.24
IFT88-202ENST00000351808 GRSF1Q12849 480 aaKnown RBP eCLIP13.54□□□□□ -0.24
IFT88-202ENST00000351808 PCLAFQ15004 111 aa13.54□□□□□ -0.24
IFT88-202ENST00000351808 Q3C1V9 767 aa13.54□□□□□ -0.24
IFT88-202ENST00000351808 BTBD8Q5XKL5 378 aa13.54□□□□□ -0.24
IFT88-202ENST00000351808 XXYLT1Q8NBI6 393 aa13.54□□□□□ -0.24
IFT88-202ENST00000351808 FEZF2Q8TBJ5 459 aa13.54□□□□□ -0.24
IFT88-202ENST00000351808 HCAR2Q8TDS4 363 aa13.54□□□□□ -0.24
IFT88-202ENST00000351808 SLCO4A1Q96BD0 722 aa13.54□□□□□ -0.24
IFT88-202ENST00000351808 CSF3RQ99062 836 aa13.54□□□□□ -0.24
IFT88-202ENST00000351808 ZBED2Q9BTP6 218 aa13.54□□□□□ -0.24
IFT88-202ENST00000351808 WDR55Q9H6Y2 383 aaPredicted RBP13.54□□□□□ -0.24
IFT88-202ENST00000351808 HACD3Q9P035 362 aa13.54□□□□□ -0.24
IFT88-202ENST00000351808 SEL1LQ9UBV2 794 aa13.54□□□□□ -0.24
IFT88-202ENST00000351808 ZC3H7BQ9UGR2 993 aaKnown RBP13.54□□□□□ -0.24
IFT88-202ENST00000351808 IPO11Q9UI26 975 aaKnown RBP13.54□□□□□ -0.24
IFT88-202ENST00000351808 ZHX2Q9Y6X8 837 aa13.54□□□□□ -0.24
IFT88-202ENST00000351808 ZSCAN5BA6NJL1 495 aa13.53□□□□□ -0.24
IFT88-202ENST00000351808 SAC3D1A6NKF1 404 aa13.53□□□□□ -0.24
IFT88-202ENST00000351808 CENPBD1B2RD01 187 aa13.53□□□□□ -0.24
IFT88-202ENST00000351808 NEMP1O14524 444 aa13.53□□□□□ -0.24
IFT88-202ENST00000351808 AURKAO14965 403 aa13.53□□□□□ -0.24
IFT88-202ENST00000351808 MSH4O15457 936 aa13.53□□□□□ -0.24
IFT88-202ENST00000351808 CST8O60676 142 aa13.53□□□□□ -0.24
IFT88-202ENST00000351808 PARNO95453 639 aaKnown RBP13.53□□□□□ -0.24
IFT88-202ENST00000351808 FYNP06241 537 aa13.53□□□□□ -0.24
IFT88-202ENST00000351808 ABCE1P61221 599 aaKnown RBP13.53□□□□□ -0.24
IFT88-202ENST00000351808 ATP6V0D1P61421 351 aa13.53□□□□□ -0.24
IFT88-202ENST00000351808 PRKCQQ04759 706 aa13.53□□□□□ -0.24
IFT88-202ENST00000351808 TMTC4Q5T4D3 741 aa13.53□□□□□ -0.24
IFT88-202ENST00000351808 EPGNQ6UW88 154 aa13.53□□□□□ -0.24
IFT88-202ENST00000351808 AKAP14Q86UN6 197 aa13.53□□□□□ -0.24
IFT88-202ENST00000351808 VCPIP1Q96JH7 1222 aa13.53□□□□□ -0.24
IFT88-202ENST00000351808 MARK4Q96L34 752 aa13.53□□□□□ -0.24
IFT88-202ENST00000351808 MUC3BQ9H195 1237 aa13.53□□□□□ -0.24
IFT88-202ENST00000351808 VAV3Q9UKW4 847 aa13.53□□□□□ -0.24
IFT88-202ENST00000351808 PSME2Q9UL46 239 aa13.53□□□□□ -0.24
IFT88-202ENST00000351808 AGTPBP1Q9UPW5 1226 aa13.53□□□□□ -0.24
IFT88-202ENST00000351808 TCAF1Q9Y4C2 921 aa13.53□□□□□ -0.24
IFT88-202ENST00000351808 TRIM64A6NGJ6 449 aa13.53□□□□□ -0.24
IFT88-202ENST00000351808 TIPRLO75663 272 aa13.53□□□□□ -0.24
IFT88-202ENST00000351808 PRKCAP17252 672 aa13.53□□□□□ -0.24
IFT88-202ENST00000351808 MYF6P23409 242 aa13.53□□□□□ -0.24
IFT88-202ENST00000351808 PTPN9P43378 593 aa13.53□□□□□ -0.24
IFT88-202ENST00000351808 MAPK11Q15759 364 aa13.53□□□□□ -0.24
IFT88-202ENST00000351808 GPR162Q16538 588 aa13.53□□□□□ -0.24
IFT88-202ENST00000351808 TBC1D10BQ4KMP7 808 aaPredicted RBP13.53□□□□□ -0.24
IFT88-202ENST00000351808 CCSAPQ6IQ19 270 aaPredicted RBP13.53□□□□□ -0.24
IFT88-202ENST00000351808 PPP4R4Q6NUP7 873 aa13.53□□□□□ -0.24
IFT88-202ENST00000351808 TRMT10BQ6PF06 316 aaKnown RBP13.53□□□□□ -0.24
IFT88-202ENST00000351808 CYP2R1Q6VVX0 501 aa13.53□□□□□ -0.24
IFT88-202ENST00000351808 OFCC1Q8IZS5 231 aa13.53□□□□□ -0.24
IFT88-202ENST00000351808 ZNF781Q8N8C0 355 aa13.53□□□□□ -0.24
IFT88-202ENST00000351808 GLT1D1Q96MS3 346 aa13.53□□□□□ -0.24
IFT88-202ENST00000351808 RAD21L1Q9H4I0 556 aa13.53□□□□□ -0.24
IFT88-202ENST00000351808 PLAC1Q9HBJ0 212 aa13.53□□□□□ -0.24
IFT88-202ENST00000351808 MOV10Q9HCE1 1003 aaKnown RBP13.53□□□□□ -0.24
IFT88-202ENST00000351808 PNPLA8Q9NP80 782 aa13.53□□□□□ -0.24
IFT88-202ENST00000351808 CRNNQ9UBG3 495 aaPredicted RBP13.53□□□□□ -0.24
IFT88-202ENST00000351808 SFMBT1Q9UHJ3 866 aa13.53□□□□□ -0.24
IFT88-202ENST00000351808 MINPP1Q9UNW1 487 aa13.53□□□□□ -0.24
IFT88-202ENST00000351808 TOR1BO14657 336 aa13.52□□□□□ -0.24
IFT88-202ENST00000351808 HOXC11O43248 304 aaPredicted RBP13.52□□□□□ -0.24
IFT88-202ENST00000351808 NUAK1O60285 661 aa13.52□□□□□ -0.24
IFT88-202ENST00000351808 UFL1O94874 794 aa13.52□□□□□ -0.24
IFT88-202ENST00000351808 IL18RAPO95256 599 aa13.52□□□□□ -0.24
IFT88-202ENST00000351808 VAPBO95292 243 aa13.52□□□□□ -0.24
IFT88-202ENST00000351808 POLR2IP36954 125 aaKnown RBP13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms