RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 FUKQ8N0W3 1084 aa16.33■□□□□ 0.2
PTPN11-201ENST00000351677 FNDC5Q8NAU1 212 aa16.33■□□□□ 0.2
PTPN11-201ENST00000351677 ZSCAN18Q8TBC5 510 aaPredicted RBP16.33■□□□□ 0.2
PTPN11-201ENST00000351677 ALG3Q92685 438 aa16.33■□□□□ 0.2
PTPN11-201ENST00000351677 FHDC1Q9C0D6 1143 aaPredicted RBP16.33■□□□□ 0.2
PTPN11-201ENST00000351677 A0A0A0MRY4 1105 aa16.33■□□□□ 0.2
PTPN11-201ENST00000351677 GPC1P35052 558 aa16.33■□□□□ 0.2
PTPN11-201ENST00000351677 SKIV2L2P42285 1042 aaKnown RBP16.33■□□□□ 0.2
PTPN11-201ENST00000351677 NCALDP61601 193 aa16.33■□□□□ 0.2
PTPN11-201ENST00000351677 ZACNQ401N2 412 aa16.33■□□□□ 0.2
PTPN11-201ENST00000351677 LRRC38Q5VT99 294 aa16.33■□□□□ 0.2
PTPN11-201ENST00000351677 CENPTQ96BT3 561 aa16.33■□□□□ 0.2
PTPN11-201ENST00000351677 SPATA13Q96N96 652 aa16.33■□□□□ 0.2
PTPN11-201ENST00000351677 CDRT15Q96T59 188 aa16.33■□□□□ 0.2
PTPN11-201ENST00000351677 IL1RAPL1Q9NZN1 696 aa16.33■□□□□ 0.2
PTPN11-201ENST00000351677 SCNN1GP51170 649 aa16.32■□□□□ 0.2
PTPN11-201ENST00000351677 CSTF3Q12996 717 aaKnown RBP16.32■□□□□ 0.2
PTPN11-201ENST00000351677 HYIQ5T013 277 aa16.32■□□□□ 0.2
PTPN11-201ENST00000351677 LLGL2Q6P1M3 1020 aa16.32■□□□□ 0.2
PTPN11-201ENST00000351677 FIG4Q92562 907 aa16.32■□□□□ 0.2
PTPN11-201ENST00000351677 FAM120BQ96EK7 910 aaKnown RBP16.32■□□□□ 0.2
PTPN11-201ENST00000351677 RNF157Q96PX1 679 aa16.32■□□□□ 0.2
PTPN11-201ENST00000351677 FMO4P31512 558 aa16.32■□□□□ 0.2
PTPN11-201ENST00000351677 WASHC5Q12768 1159 aa16.32■□□□□ 0.2
PTPN11-201ENST00000351677 CNTN1Q12860 1018 aa16.32■□□□□ 0.2
PTPN11-201ENST00000351677 LRRC74BQ6ZQY2 392 aa16.32■□□□□ 0.2
PTPN11-201ENST00000351677 C12orf29Q8N999 325 aa16.32■□□□□ 0.2
PTPN11-201ENST00000351677 SNRNP27Q8WVK2 155 aaKnown RBP16.32■□□□□ 0.2
PTPN11-201ENST00000351677 PIGNO95427 931 aa16.32■□□□□ 0.2
PTPN11-201ENST00000351677 FLT3P36888 993 aa16.32■□□□□ 0.2
PTPN11-201ENST00000351677 ALDH6A1Q02252 535 aaKnown RBP16.32■□□□□ 0.2
PTPN11-201ENST00000351677 GJC2Q5T442 439 aaPredicted RBP16.32■□□□□ 0.2
PTPN11-201ENST00000351677 IQSEC1Q6DN90 963 aa16.32■□□□□ 0.2
PTPN11-201ENST00000351677 C16orf59Q7L2K0 433 aa16.32■□□□□ 0.2
PTPN11-201ENST00000351677 PSTKQ8IV42 348 aaKnown RBP16.32■□□□□ 0.2
PTPN11-201ENST00000351677 LRRC39Q96DD0 335 aa16.32■□□□□ 0.2
PTPN11-201ENST00000351677 TAS2R13Q9NYV9 303 aa16.32■□□□□ 0.2
PTPN11-201ENST00000351677 ADGRA3Q8IWK6 1321 aa16.32■□□□□ 0.2
PTPN11-201ENST00000351677 TP53BP2Q13625 1128 aa16.32■□□□□ 0.2
PTPN11-201ENST00000351677 DNAJC5Q9H3Z4 198 aa16.32■□□□□ 0.2
PTPN11-201ENST00000351677 NDUFAF1Q9Y375 327 aa16.32■□□□□ 0.2
PTPN11-201ENST00000351677 PCDHA11Q9Y5I1 949 aa16.32■□□□□ 0.2
PTPN11-201ENST00000351677 hCG_1818297A0A087WSY0 165 aa16.32■□□□□ 0.2
PTPN11-201ENST00000351677 A8MX80 341 aa16.32■□□□□ 0.2
PTPN11-201ENST00000351677 MRASO14807 208 aa16.32■□□□□ 0.2
PTPN11-201ENST00000351677 INPP4BO15327 924 aa16.32■□□□□ 0.2
PTPN11-201ENST00000351677 FSBPO95073 299 aa16.32■□□□□ 0.2
PTPN11-201ENST00000351677 POU1F1P28069 291 aa16.32■□□□□ 0.2
PTPN11-201ENST00000351677 SLC16A1P53985 500 aa16.32■□□□□ 0.2
PTPN11-201ENST00000351677 VAC14Q08AM6 782 aa16.32■□□□□ 0.2
PTPN11-201ENST00000351677 TMCO5AQ8N6Q1 288 aa16.32■□□□□ 0.2
PTPN11-201ENST00000351677 ADAM2Q99965 735 aa16.32■□□□□ 0.2
PTPN11-201ENST00000351677 NRDE2Q9H7Z3 1164 aa16.32■□□□□ 0.2
PTPN11-201ENST00000351677 POLG2Q9UHN1 485 aa16.32■□□□□ 0.2
PTPN11-201ENST00000351677 STARD13Q9Y3M8 1113 aa16.32■□□□□ 0.2
PTPN11-201ENST00000351677 AP4S1Q9Y587 144 aa16.32■□□□□ 0.2
PTPN11-201ENST00000351677 SPATA31C2B4DYI2 1134 aa16.31■□□□□ 0.2
PTPN11-201ENST00000351677 RFX3P48380 749 aa16.31■□□□□ 0.2
PTPN11-201ENST00000351677 STARD3Q14849 445 aa16.31■□□□□ 0.2
PTPN11-201ENST00000351677 PARVBQ9HBI1 364 aa16.31■□□□□ 0.2
PTPN11-201ENST00000351677 SAR1AQ9NR31 198 aa16.31■□□□□ 0.2
PTPN11-201ENST00000351677 ZMYM5Q9UJ78 669 aa16.31■□□□□ 0.2
PTPN11-201ENST00000351677 DYRK1BQ9Y463 629 aa16.31■□□□□ 0.2
PTPN11-201ENST00000351677 ASTN2O75129 1339 aaPredicted RBP16.31■□□□□ 0.2
PTPN11-201ENST00000351677 ITGAVP06756 1048 aa16.31■□□□□ 0.2
PTPN11-201ENST00000351677 TM4SF1P30408 202 aa16.31■□□□□ 0.2
PTPN11-201ENST00000351677 EML3Q32P44 896 aa16.31■□□□□ 0.2
PTPN11-201ENST00000351677 SLC41A1Q8IVJ1 513 aa16.31■□□□□ 0.2
PTPN11-201ENST00000351677 MED8Q96G25 268 aa16.31■□□□□ 0.2
PTPN11-201ENST00000351677 PCDHB18PQ96TA0 734 aa16.31■□□□□ 0.2
PTPN11-201ENST00000351677 DPY30Q9C005 99 aa16.31■□□□□ 0.2
PTPN11-201ENST00000351677 RERGLQ9H628 205 aa16.31■□□□□ 0.2
PTPN11-201ENST00000351677 RRAGCQ9HB90 399 aa16.31■□□□□ 0.2
PTPN11-201ENST00000351677 BTN3A1O00481 513 aa16.31■□□□□ 0.2
PTPN11-201ENST00000351677 NPR3P17342 541 aa16.31■□□□□ 0.2
PTPN11-201ENST00000351677 MMP13P45452 471 aa16.31■□□□□ 0.2
PTPN11-201ENST00000351677 CDK7P50613 346 aa16.31■□□□□ 0.2
PTPN11-201ENST00000351677 PKNOX1P55347 436 aa16.31■□□□□ 0.2
PTPN11-201ENST00000351677 ELAVL2Q12926 359 aaKnown RBP16.31■□□□□ 0.2
PTPN11-201ENST00000351677 OTUD3Q5T2D3 398 aaPredicted RBP16.31■□□□□ 0.2
PTPN11-201ENST00000351677 POLNQ7Z5Q5 900 aa16.31■□□□□ 0.2
PTPN11-201ENST00000351677 UNC93AQ86WB7 457 aa16.31■□□□□ 0.2
PTPN11-201ENST00000351677 DHFR2Q86XF0 187 aa16.31■□□□□ 0.2
PTPN11-201ENST00000351677 NETO2Q8NC67 525 aa16.31■□□□□ 0.2
PTPN11-201ENST00000351677 SMAD5Q99717 465 aaKnown RBP16.31■□□□□ 0.2
PTPN11-201ENST00000351677 USE1Q9NZ43 259 aa16.31■□□□□ 0.2
PTPN11-201ENST00000351677 SEPT3Q9UH03 358 aa16.31■□□□□ 0.2
PTPN11-201ENST00000351677 TATDN1Q6P1N9 297 aa16.31■□□□□ 0.2
PTPN11-201ENST00000351677 OR6Y1Q8NGX8 325 aa16.31■□□□□ 0.2
PTPN11-201ENST00000351677 MARK4Q96L34 752 aa16.31■□□□□ 0.2
PTPN11-201ENST00000351677 ERVK-5Q9HDB9 667 aa16.31■□□□□ 0.2
PTPN11-201ENST00000351677 PQBP1O60828 265 aaKnown RBP16.31■□□□□ 0.2
PTPN11-201ENST00000351677 KRT8P05787 483 aa16.31■□□□□ 0.2
PTPN11-201ENST00000351677 LRP10Q7Z4F1 713 aa16.31■□□□□ 0.2
PTPN11-201ENST00000351677 STK32AQ8WU08 396 aa16.31■□□□□ 0.2
PTPN11-201ENST00000351677 BBS2Q9BXC9 721 aa16.31■□□□□ 0.2
PTPN11-201ENST00000351677 KCNK4Q9NYG8 393 aa16.31■□□□□ 0.2
PTPN11-201ENST00000351677 TBC1D12O60347 775 aa16.3■□□□□ 0.2
PTPN11-201ENST00000351677 FASP25445 335 aa16.3■□□□□ 0.2
PTPN11-201ENST00000351677 NAB1Q13506 487 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms