RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 1 (best) BASIC

Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 MTSS1O43312 755 aa22.67■■□□□ 1.22
UPF3A-201ENST00000351487 PROCP04070 461 aa22.67■■□□□ 1.22
UPF3A-201ENST00000351487 ZNF135P52742 658 aaPredicted RBP22.67■■□□□ 1.22
UPF3A-201ENST00000351487 RPL10AP62906 217 aaKnown RBP22.67■■□□□ 1.22
UPF3A-201ENST00000351487 IRX4P78413 519 aa22.67■■□□□ 1.22
UPF3A-201ENST00000351487 PDE1BQ01064 536 aa22.67■■□□□ 1.22
UPF3A-201ENST00000351487 KCTD11Q693B1 232 aa22.67■■□□□ 1.22
UPF3A-201ENST00000351487 TMEM135Q86UB9 458 aa22.67■■□□□ 1.22
UPF3A-201ENST00000351487 TMPRSS6Q8IU80 811 aa22.67■■□□□ 1.22
UPF3A-201ENST00000351487 WDR75Q8IWA0 830 aaKnown RBP22.67■■□□□ 1.22
UPF3A-201ENST00000351487 NPWQ8N729 165 aa22.67■■□□□ 1.22
UPF3A-201ENST00000351487 OR52K1Q8NGK4 314 aa22.67■■□□□ 1.22
UPF3A-201ENST00000351487 ADAM32Q8TC27 787 aa22.67■■□□□ 1.22
UPF3A-201ENST00000351487 PIWIL2Q8TC59 973 aaKnown RBP22.67■■□□□ 1.22
UPF3A-201ENST00000351487 MEIS3P2A8K0S8 358 aa22.67■■□□□ 1.22
UPF3A-201ENST00000351487 MAGEC1O60732 1142 aa22.67■■□□□ 1.22
UPF3A-201ENST00000351487 LTFP02788 710 aa22.67■■□□□ 1.22
UPF3A-201ENST00000351487 AMHP03971 560 aa22.67■■□□□ 1.22
UPF3A-201ENST00000351487 ERVK-10P10266 1014 aa22.67■■□□□ 1.22
UPF3A-201ENST00000351487 GARSP41250 739 aaKnown RBP22.67■■□□□ 1.22
UPF3A-201ENST00000351487 PTDSS1P48651 473 aaKnown RBP22.67■■□□□ 1.22
UPF3A-201ENST00000351487 RAP1GDS1P52306 607 aa22.67■■□□□ 1.22
UPF3A-201ENST00000351487 ZNF778Q96MU6 729 aa22.67■■□□□ 1.22
UPF3A-201ENST00000351487 FCRL3Q96P31 734 aaPredicted RBP22.67■■□□□ 1.22
UPF3A-201ENST00000351487 CASS4Q9NQ75 786 aa22.67■■□□□ 1.22
UPF3A-201ENST00000351487 TMEM30AQ9NV96 361 aa22.67■■□□□ 1.22
UPF3A-201ENST00000351487 TAGLN3Q9UI15 199 aa22.67■■□□□ 1.22
UPF3A-201ENST00000351487 MYBPHLA2RUH7 354 aa22.66■■□□□ 1.22
UPF3A-201ENST00000351487 H0Y3Z8 333 aa22.66■■□□□ 1.22
UPF3A-201ENST00000351487 SERPINE1P05121 402 aa22.66■■□□□ 1.22
UPF3A-201ENST00000351487 GCKP35557 465 aa22.66■■□□□ 1.22
UPF3A-201ENST00000351487 MLH1P40692 756 aa22.66■■□□□ 1.22
UPF3A-201ENST00000351487 PURAQ00577 322 aaKnown RBP22.66■■□□□ 1.22
UPF3A-201ENST00000351487 TAF11Q15544 211 aa22.66■■□□□ 1.22
UPF3A-201ENST00000351487 ARL13BQ3SXY8 428 aa22.66■■□□□ 1.22
UPF3A-201ENST00000351487 ACSBG2Q5FVE4 666 aa22.66■■□□□ 1.22
UPF3A-201ENST00000351487 BHLHA9Q7RTU4 235 aa22.66■■□□□ 1.22
UPF3A-201ENST00000351487 KCNK16Q96T55 309 aa22.66■■□□□ 1.22
UPF3A-201ENST00000351487 RBBP8Q99708 897 aa22.66■■□□□ 1.22
UPF3A-201ENST00000351487 GBA3Q9H227 469 aa22.66■■□□□ 1.22
UPF3A-201ENST00000351487 CACNG4Q9UBN1 327 aa22.66■■□□□ 1.22
UPF3A-201ENST00000351487 CDH9Q9ULB4 789 aa22.66■■□□□ 1.22
UPF3A-201ENST00000351487 VANGL2Q9ULK5 521 aa22.66■■□□□ 1.22
UPF3A-201ENST00000351487 SHROOM3Q8TF72 1996 aa22.66■■□□□ 1.22
UPF3A-201ENST00000351487 HHLA1C9JL84 531 aa22.66■■□□□ 1.22
UPF3A-201ENST00000351487 USP1O94782 785 aa22.66■■□□□ 1.22
UPF3A-201ENST00000351487 F9P00740 461 aa22.66■■□□□ 1.22
UPF3A-201ENST00000351487 ENO1P06733 434 aaKnown RBP22.66■■□□□ 1.22
UPF3A-201ENST00000351487 NCAM1P13591 858 aa22.66■■□□□ 1.22
UPF3A-201ENST00000351487 MX2P20592 715 aa22.66■■□□□ 1.22
UPF3A-201ENST00000351487 GRK2P25098 689 aa22.66■■□□□ 1.22
UPF3A-201ENST00000351487 SLC1A6P48664 564 aa22.66■■□□□ 1.22
UPF3A-201ENST00000351487 GALNT2Q10471 571 aa22.66■■□□□ 1.22
UPF3A-201ENST00000351487 KPNB1Q14974 876 aaKnown RBP22.66■■□□□ 1.22
UPF3A-201ENST00000351487 CCL14Q16627 93 aa22.66■■□□□ 1.22
UPF3A-201ENST00000351487 SERBP1Q8NC51 408 aaKnown RBP eCLIP22.66■■□□□ 1.22
UPF3A-201ENST00000351487 NAF1Q96HR8 494 aaKnown RBP22.66■■□□□ 1.22
UPF3A-201ENST00000351487 FAM105AQ9NUU6 356 aa22.66■■□□□ 1.22
UPF3A-201ENST00000351487 DDIT4Q9NX09 232 aa22.66■■□□□ 1.22
UPF3A-201ENST00000351487 BFARQ9NZS9 450 aa22.66■■□□□ 1.22
UPF3A-201ENST00000351487 TRHDEQ9UKU6 1024 aa22.66■■□□□ 1.22
UPF3A-201ENST00000351487 B2RBV5 119 aa22.65■■□□□ 1.22
UPF3A-201ENST00000351487 ITM2AO43736 263 aa22.65■■□□□ 1.22
UPF3A-201ENST00000351487 USP17L7P0C7H9 530 aa22.65■■□□□ 1.22
UPF3A-201ENST00000351487 CYP2B6P20813 491 aa22.65■■□□□ 1.22
UPF3A-201ENST00000351487 TYK2P29597 1187 aa22.65■■□□□ 1.22
UPF3A-201ENST00000351487 RABGGTBP53611 331 aa22.65■■□□□ 1.22
UPF3A-201ENST00000351487 CACNA2D1P54289 1103 aa22.65■■□□□ 1.22
UPF3A-201ENST00000351487 MRPS6P82932 125 aaKnown RBP22.65■■□□□ 1.22
UPF3A-201ENST00000351487 TUBB3Q13509 450 aa22.65■■□□□ 1.22
UPF3A-201ENST00000351487 CES3Q6UWW8 571 aa22.65■■□□□ 1.22
UPF3A-201ENST00000351487 PAXIP1Q6ZW49 1069 aaPredicted RBP22.65■■□□□ 1.22
UPF3A-201ENST00000351487 EBF4Q9BQW3 602 aa22.65■■□□□ 1.22
UPF3A-201ENST00000351487 COLEC11Q9BWP8 271 aa22.65■■□□□ 1.22
UPF3A-201ENST00000351487 IL1RAPL1Q9NZN1 696 aa22.65■■□□□ 1.22
UPF3A-201ENST00000351487 COPG2Q9UBF2 871 aa22.65■■□□□ 1.22
UPF3A-201ENST00000351487 STOML1Q9UBI4 398 aa22.65■■□□□ 1.22
UPF3A-201ENST00000351487 GTF3C5Q9Y5Q8 519 aaPredicted RBP22.65■■□□□ 1.22
UPF3A-201ENST00000351487 THP07101 528 aa22.65■■□□□ 1.22
UPF3A-201ENST00000351487 KCNA4P22459 653 aa22.65■■□□□ 1.22
UPF3A-201ENST00000351487 LIMK2P53671 638 aa22.65■■□□□ 1.22
UPF3A-201ENST00000351487 OLIG2Q13516 323 aa22.65■■□□□ 1.22
UPF3A-201ENST00000351487 FSCN1Q16658 493 aaKnown RBP22.65■■□□□ 1.22
UPF3A-201ENST00000351487 ZNF669Q96BR6 464 aaPredicted RBP22.65■■□□□ 1.22
UPF3A-201ENST00000351487 SMARCD1Q96GM5 515 aa22.65■■□□□ 1.22
UPF3A-201ENST00000351487 RILPQ96NA2 401 aa22.65■■□□□ 1.22
UPF3A-201ENST00000351487 AGAP3Q96P47 875 aa22.65■■□□□ 1.22
UPF3A-201ENST00000351487 GAD1Q99259 594 aa22.65■■□□□ 1.22
UPF3A-201ENST00000351487 VAT1Q99536 393 aa22.65■■□□□ 1.22
UPF3A-201ENST00000351487 SNX15Q9NRS6 342 aa22.65■■□□□ 1.22
UPF3A-201ENST00000351487 DNAJC16Q9Y2G8 782 aa22.65■■□□□ 1.22
UPF3A-201ENST00000351487 NUP205Q92621 2012 aa22.64■■□□□ 1.22
UPF3A-201ENST00000351487 ZCWPW2A0A1B0GU75 182 aa22.64■■□□□ 1.21
UPF3A-201ENST00000351487 ZBTB24O43167 697 aaPredicted RBP22.64■■□□□ 1.21
UPF3A-201ENST00000351487 LYPLA1O75608 230 aaPredicted RBP22.64■■□□□ 1.21
UPF3A-201ENST00000351487 LUC7L3O95232 432 aaKnown RBP22.64■■□□□ 1.21
UPF3A-201ENST00000351487 AOC1P19801 751 aa22.64■■□□□ 1.21
UPF3A-201ENST00000351487 CD68P34810 354 aaPredicted RBP22.64■■□□□ 1.21
UPF3A-201ENST00000351487 PGM1P36871 562 aa22.64■■□□□ 1.21
UPF3A-201ENST00000351487 CPA2P48052 419 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms