RNA–Protein interactions for RNA: ENST00000350697.7

SEC13-202, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SEC13, Length 1,425 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-202ENST00000350697 PRRT4C9JH25 899 aa14.35□□□□□ -0.11
SEC13-202ENST00000350697 TIMM44O43615 452 aa14.35□□□□□ -0.11
SEC13-202ENST00000350697 CREB3O43889 395 aa14.35□□□□□ -0.11
SEC13-202ENST00000350697 RNF40O75150 1001 aa14.35□□□□□ -0.11
SEC13-202ENST00000350697 PABPC1P11940 636 aaKnown RBP14.35□□□□□ -0.11
SEC13-202ENST00000350697 MSNP26038 577 aaKnown RBP14.35□□□□□ -0.11
SEC13-202ENST00000350697 IL1R2P27930 398 aa14.35□□□□□ -0.11
SEC13-202ENST00000350697 CD70P32970 193 aa14.35□□□□□ -0.11
SEC13-202ENST00000350697 HTR7P34969 479 aa14.35□□□□□ -0.11
SEC13-202ENST00000350697 SSR1P43307 286 aaKnown RBP14.35□□□□□ -0.11
SEC13-202ENST00000350697 MRPS21P82921 87 aaKnown RBP14.35□□□□□ -0.11
SEC13-202ENST00000350697 CCZ1BP86790 482 aa14.35□□□□□ -0.11
SEC13-202ENST00000350697 CCZ1P86791 482 aaPredicted RBP14.35□□□□□ -0.11
SEC13-202ENST00000350697 SLC25A11Q02978 314 aaKnown RBP14.35□□□□□ -0.11
SEC13-202ENST00000350697 LMAN2Q12907 356 aa14.35□□□□□ -0.11
SEC13-202ENST00000350697 ALFQ53S48 1182 aa14.35□□□□□ -0.11
SEC13-202ENST00000350697 FSCBQ5H9T9 825 aa14.35□□□□□ -0.11
SEC13-202ENST00000350697 RWDD4Q6NW29 188 aaKnown RBP14.35□□□□□ -0.11
SEC13-202ENST00000350697 Q6ZS52 159 aa14.35□□□□□ -0.11
SEC13-202ENST00000350697 KIAA0907Q7Z7F0 614 aaPredicted RBP14.35□□□□□ -0.11
SEC13-202ENST00000350697 ZSCAN30Q86W11 494 aa14.35□□□□□ -0.11
SEC13-202ENST00000350697 AHI1Q8N157 1196 aa14.35□□□□□ -0.11
SEC13-202ENST00000350697 KCNV2Q8TDN2 545 aa14.35□□□□□ -0.11
SEC13-202ENST00000350697 USP33Q8TEY7 942 aa14.35□□□□□ -0.11
SEC13-202ENST00000350697 TEKT4Q8WW24 435 aa14.35□□□□□ -0.11
SEC13-202ENST00000350697 LMLNQ96KR4 655 aa14.35□□□□□ -0.11
SEC13-202ENST00000350697 CALR3Q96L12 384 aaKnown RBP14.35□□□□□ -0.11
SEC13-202ENST00000350697 LACRTQ9GZZ8 138 aa14.35□□□□□ -0.11
SEC13-202ENST00000350697 ZWILCHQ9H900 591 aa14.35□□□□□ -0.11
SEC13-202ENST00000350697 TBC1D30Q9Y2I9 924 aa14.35□□□□□ -0.11
SEC13-202ENST00000350697 CHURC1-FNTBB4DL54 471 aa14.34□□□□□ -0.11
SEC13-202ENST00000350697 ATG13O75143 517 aa14.34□□□□□ -0.11
SEC13-202ENST00000350697 MOCS3O95396 460 aa14.34□□□□□ -0.11
SEC13-202ENST00000350697 RARAP10276 462 aa14.34□□□□□ -0.11
SEC13-202ENST00000350697 RHOQP17081 205 aa14.34□□□□□ -0.11
SEC13-202ENST00000350697 EPHB2P29323 1055 aa14.34□□□□□ -0.11
SEC13-202ENST00000350697 HOXC13P31276 330 aa14.34□□□□□ -0.11
SEC13-202ENST00000350697 SLC1A1P43005 524 aa14.34□□□□□ -0.11
SEC13-202ENST00000350697 KIR2DL1P43626 348 aaPredicted RBP14.34□□□□□ -0.11
SEC13-202ENST00000350697 ZNF135P52742 658 aaPredicted RBP14.34□□□□□ -0.11
SEC13-202ENST00000350697 SEC13P55735 322 aa14.34□□□□□ -0.11
SEC13-202ENST00000350697 KIF5AQ12840 1032 aa14.34□□□□□ -0.11
SEC13-202ENST00000350697 SLC12A1Q13621 1099 aa14.34□□□□□ -0.11
SEC13-202ENST00000350697 DMC1Q14565 340 aa14.34□□□□□ -0.11
SEC13-202ENST00000350697 E2F5Q15329 346 aa14.34□□□□□ -0.11
SEC13-202ENST00000350697 DPYSL2Q16555 572 aa14.34□□□□□ -0.11
SEC13-202ENST00000350697 CA9Q16790 459 aa14.34□□□□□ -0.11
SEC13-202ENST00000350697 SMTNL2Q2TAL5 461 aa14.34□□□□□ -0.11
SEC13-202ENST00000350697 HSF5Q4G112 596 aaPredicted RBP14.34□□□□□ -0.11
SEC13-202ENST00000350697 C2orf27AQ580R0 203 aa14.34□□□□□ -0.11
SEC13-202ENST00000350697 KCNT1Q5JUK3 1230 aa14.34□□□□□ -0.11
SEC13-202ENST00000350697 CXorf57Q6NSI4 855 aaKnown RBP14.34□□□□□ -0.11
SEC13-202ENST00000350697 TFAP2DQ7Z6R9 452 aa14.34□□□□□ -0.11
SEC13-202ENST00000350697 SETD3Q86TU7 594 aaPredicted RBP14.34□□□□□ -0.11
SEC13-202ENST00000350697 SPEM1Q8N4L4 309 aa14.34□□□□□ -0.11
SEC13-202ENST00000350697 RPLP0P6Q8NHW5 317 aa14.34□□□□□ -0.11
SEC13-202ENST00000350697 UCMAQ8WVF2 138 aa14.34□□□□□ -0.11
SEC13-202ENST00000350697 ELOVL2Q9NXB9 296 aa14.34□□□□□ -0.11
SEC13-202ENST00000350697 NEU3Q9UQ49 428 aa14.34□□□□□ -0.11
SEC13-202ENST00000350697 ADGRG1Q9Y653 693 aa14.34□□□□□ -0.11
SEC13-202ENST00000350697 KMT2EQ8IZD2 1858 aa14.34□□□□□ -0.11
SEC13-202ENST00000350697 CACNA1IQ9P0X4 2223 aa14.34□□□□□ -0.11
SEC13-202ENST00000350697 EEF2KO00418 725 aaKnown RBP14.33□□□□□ -0.11
SEC13-202ENST00000350697 BUB1BO60566 1050 aaPredicted RBP14.33□□□□□ -0.11
SEC13-202ENST00000350697 KRT7P08729 469 aa14.33□□□□□ -0.11
SEC13-202ENST00000350697 POLR2EP19388 210 aaKnown RBP14.33□□□□□ -0.11
SEC13-202ENST00000350697 OR1E1P30953 314 aa14.33□□□□□ -0.11
SEC13-202ENST00000350697 TIE1P35590 1138 aa14.33□□□□□ -0.11
SEC13-202ENST00000350697 MAPKAPK2P49137 400 aa14.33□□□□□ -0.11
SEC13-202ENST00000350697 NUBP1P53384 320 aa14.33□□□□□ -0.11
SEC13-202ENST00000350697 TAS2R40P59535 323 aa14.33□□□□□ -0.11
SEC13-202ENST00000350697 TPI1P60174 286 aa14.33□□□□□ -0.11
SEC13-202ENST00000350697 MTAPQ13126 283 aa14.33□□□□□ -0.11
SEC13-202ENST00000350697 GAS6Q14393 721 aa14.33□□□□□ -0.11
SEC13-202ENST00000350697 PLEKHG6Q3KR16 790 aa14.33□□□□□ -0.11
SEC13-202ENST00000350697 PPP6R3Q5H9R7 873 aaPredicted RBP14.33□□□□□ -0.11
SEC13-202ENST00000350697 C6orf118Q5T5N4 469 aa14.33□□□□□ -0.11
SEC13-202ENST00000350697 EMC10Q5UCC4 262 aa14.33□□□□□ -0.11
SEC13-202ENST00000350697 TMEM215Q68D42 235 aa14.33□□□□□ -0.11
SEC13-202ENST00000350697 MBLAC2Q68D91 279 aa14.33□□□□□ -0.11
SEC13-202ENST00000350697 TXNRD3NBQ6F5E7 133 aa14.33□□□□□ -0.11
SEC13-202ENST00000350697 MAMSTRQ6ZN01 415 aa14.33□□□□□ -0.11
SEC13-202ENST00000350697 TRMT11Q7Z4G4 463 aaKnown RBP14.33□□□□□ -0.11
SEC13-202ENST00000350697 ADIPOR2Q86V24 386 aa14.33□□□□□ -0.11
SEC13-202ENST00000350697 NLRP14Q86W24 1093 aa14.33□□□□□ -0.11
SEC13-202ENST00000350697 CPNE8Q86YQ8 564 aa14.33□□□□□ -0.11
SEC13-202ENST00000350697 ZNF513Q8N8E2 541 aaPredicted RBP14.33□□□□□ -0.11
SEC13-202ENST00000350697 DTWD2Q8NBA8 298 aa14.33□□□□□ -0.11
SEC13-202ENST00000350697 HSPH1Q92598 858 aa14.33□□□□□ -0.11
SEC13-202ENST00000350697 ACDQ96AP0 544 aa14.33□□□□□ -0.11
SEC13-202ENST00000350697 KCTD15Q96SI1 283 aaPredicted RBP14.33□□□□□ -0.11
SEC13-202ENST00000350697 CIPCQ9C0C6 399 aa14.33□□□□□ -0.11
SEC13-202ENST00000350697 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.33□□□□□ -0.11
SEC13-202ENST00000350697 TMEM248Q9NWD8 314 aa14.33□□□□□ -0.11
SEC13-202ENST00000350697 ZNF212Q9UDV6 495 aa14.33□□□□□ -0.11
SEC13-202ENST00000350697 SALL4Q9UJQ4 1053 aa14.33□□□□□ -0.11
SEC13-202ENST00000350697 DUSP10Q9Y6W6 482 aa14.33□□□□□ -0.11
SEC13-202ENST00000350697 ILVBLA1L0T0 632 aa14.32□□□□□ -0.12
SEC13-202ENST00000350697 ESPNB1AK53 854 aa14.32□□□□□ -0.12
SEC13-202ENST00000350697 NPC1O15118 1278 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms