RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 CCDC15Q0P6D6 951 aa17.12■□□□□ 0.33
SAMM50-201ENST00000350028 PPP2R5DQ14738 602 aa17.12■□□□□ 0.33
SAMM50-201ENST00000350028 SPANXN3Q5MJ09 141 aa17.12■□□□□ 0.33
SAMM50-201ENST00000350028 ZNF449Q6P9G9 518 aa17.12■□□□□ 0.33
SAMM50-201ENST00000350028 SCD5Q86SK9 330 aa17.12■□□□□ 0.33
SAMM50-201ENST00000350028 SCN4BQ8IWT1 228 aa17.12■□□□□ 0.33
SAMM50-201ENST00000350028 C8orf48Q96LL4 319 aa17.12■□□□□ 0.33
SAMM50-201ENST00000350028 TSGA13Q96PP4 275 aa17.12■□□□□ 0.33
SAMM50-201ENST00000350028 SEZ6LQ9BYH1 1024 aa17.12■□□□□ 0.33
SAMM50-201ENST00000350028 GBA3Q9H227 469 aa17.12■□□□□ 0.33
SAMM50-201ENST00000350028 MANSC1Q9H8J5 431 aa17.12■□□□□ 0.33
SAMM50-201ENST00000350028 SLCO1B3Q9NPD5 702 aa17.12■□□□□ 0.33
SAMM50-201ENST00000350028 USH1CQ9Y6N9 552 aa17.12■□□□□ 0.33
SAMM50-201ENST00000350028 MYO18AQ92614 2054 aaKnown RBP17.11■□□□□ 0.33
SAMM50-201ENST00000350028 FGF10O15520 208 aaPredicted RBP17.11■□□□□ 0.33
SAMM50-201ENST00000350028 ZBTB24O43167 697 aaPredicted RBP17.11■□□□□ 0.33
SAMM50-201ENST00000350028 UGT1A9O60656 530 aa17.11■□□□□ 0.33
SAMM50-201ENST00000350028 TADA2AO75478 443 aa17.11■□□□□ 0.33
SAMM50-201ENST00000350028 UBOX5O94941 541 aa17.11■□□□□ 0.33
SAMM50-201ENST00000350028 OR4Q2P0C623 313 aa17.11■□□□□ 0.33
SAMM50-201ENST00000350028 SELPP16109 830 aa17.11■□□□□ 0.33
SAMM50-201ENST00000350028 HOXC13P31276 330 aa17.11■□□□□ 0.33
SAMM50-201ENST00000350028 NIPAL4Q0D2K0 466 aa17.11■□□□□ 0.33
SAMM50-201ENST00000350028 LRRC8DQ7L1W4 858 aa17.11■□□□□ 0.33
SAMM50-201ENST00000350028 LZTR1Q8N653 840 aa17.11■□□□□ 0.33
SAMM50-201ENST00000350028 SLAIN1Q8ND83 568 aa17.11■□□□□ 0.33
SAMM50-201ENST00000350028 SRPK1Q96SB4 655 aaKnown RBP17.11■□□□□ 0.33
SAMM50-201ENST00000350028 TRIM56Q9BRZ2 755 aaKnown RBP17.11■□□□□ 0.33
SAMM50-201ENST00000350028 CATSPERBQ9H7T0 1116 aa17.11■□□□□ 0.33
SAMM50-201ENST00000350028 UGT1A7Q9HAW7 530 aa17.11■□□□□ 0.33
SAMM50-201ENST00000350028 UGT1A10Q9HAW8 530 aa17.11■□□□□ 0.33
SAMM50-201ENST00000350028 UGT1A8Q9HAW9 530 aa17.11■□□□□ 0.33
SAMM50-201ENST00000350028 ABI2Q9NYB9 513 aaPredicted RBP17.11■□□□□ 0.33
SAMM50-201ENST00000350028 PHF24Q9UPV7 400 aa17.11■□□□□ 0.33
SAMM50-201ENST00000350028 SCML2Q9UQR0 700 aa17.11■□□□□ 0.33
SAMM50-201ENST00000350028 DNAH12Q6ZR08 3092 aa17.11■□□□□ 0.33
SAMM50-201ENST00000350028 WDR91A4D1P6 747 aa17.1■□□□□ 0.33
SAMM50-201ENST00000350028 AP3B1O00203 1094 aa17.1■□□□□ 0.33
SAMM50-201ENST00000350028 FKTNO75072 461 aa17.1■□□□□ 0.33
SAMM50-201ENST00000350028 POLBP06746 335 aa17.1■□□□□ 0.33
SAMM50-201ENST00000350028 CCNCP24863 283 aa17.1■□□□□ 0.33
SAMM50-201ENST00000350028 ALDH3A1P30838 453 aa17.1■□□□□ 0.33
SAMM50-201ENST00000350028 PRPSAP1Q14558 356 aa17.1■□□□□ 0.33
SAMM50-201ENST00000350028 CRYMQ14894 314 aa17.1■□□□□ 0.33
SAMM50-201ENST00000350028 FYB2Q5VWT5 728 aa17.1■□□□□ 0.33
SAMM50-201ENST00000350028 KCTD11Q693B1 232 aa17.1■□□□□ 0.33
SAMM50-201ENST00000350028 OTOAQ7RTW8 1153 aa17.1■□□□□ 0.33
SAMM50-201ENST00000350028 MON1AQ86VX9 555 aa17.1■□□□□ 0.33
SAMM50-201ENST00000350028 TRIM42Q8IWZ5 723 aa17.1■□□□□ 0.33
SAMM50-201ENST00000350028 NUP93Q8N1F7 819 aa17.1■□□□□ 0.33
SAMM50-201ENST00000350028 ARHGAP18Q8N392 663 aa17.1■□□□□ 0.33
SAMM50-201ENST00000350028 ZNF398Q8TD17 642 aa17.1■□□□□ 0.33
SAMM50-201ENST00000350028 CASP10Q92851 521 aa17.1■□□□□ 0.33
SAMM50-201ENST00000350028 TBC1D31Q96DN5 1066 aa17.1■□□□□ 0.33
SAMM50-201ENST00000350028 TEKT5Q96M29 485 aa17.1■□□□□ 0.33
SAMM50-201ENST00000350028 FAM111AQ96PZ2 611 aa17.1■□□□□ 0.33
SAMM50-201ENST00000350028 SIK2Q9H0K1 926 aa17.1■□□□□ 0.33
SAMM50-201ENST00000350028 FBXO44Q9H4M3 255 aa17.1■□□□□ 0.33
SAMM50-201ENST00000350028 LRRC40Q9H9A6 602 aa17.1■□□□□ 0.33
SAMM50-201ENST00000350028 CASS4Q9NQ75 786 aa17.1■□□□□ 0.33
SAMM50-201ENST00000350028 SYBUQ9NX95 663 aa17.1■□□□□ 0.33
SAMM50-201ENST00000350028 BFARQ9NZS9 450 aa17.1■□□□□ 0.33
SAMM50-201ENST00000350028 PLLPQ9Y342 182 aa17.1■□□□□ 0.33
SAMM50-201ENST00000350028 PCDHB5Q9Y5E4 795 aa17.1■□□□□ 0.33
SAMM50-201ENST00000350028 PAGE1O75459 146 aa17.1■□□□□ 0.33
SAMM50-201ENST00000350028 SRGAP2BP0DMP2 458 aa17.1■□□□□ 0.33
SAMM50-201ENST00000350028 CD68P34810 354 aaPredicted RBP17.1■□□□□ 0.33
SAMM50-201ENST00000350028 MAGEA11P43364 429 aa17.1■□□□□ 0.33
SAMM50-201ENST00000350028 NPY2RP49146 381 aa17.1■□□□□ 0.33
SAMM50-201ENST00000350028 CRADDP78560 199 aa17.1■□□□□ 0.33
SAMM50-201ENST00000350028 NRG1Q02297 640 aaPredicted RBP17.1■□□□□ 0.33
SAMM50-201ENST00000350028 MGAT5Q09328 741 aa17.1■□□□□ 0.33
SAMM50-201ENST00000350028 BNIP1Q12981 228 aa17.1■□□□□ 0.33
SAMM50-201ENST00000350028 FAM133BQ5BKY9 247 aaKnown RBP17.1■□□□□ 0.33
SAMM50-201ENST00000350028 MANEALQ5VSG8 457 aa17.1■□□□□ 0.33
SAMM50-201ENST00000350028 RWDD4Q6NW29 188 aaKnown RBP17.1■□□□□ 0.33
SAMM50-201ENST00000350028 PACS2Q86VP3 889 aa17.1■□□□□ 0.33
SAMM50-201ENST00000350028 OR52K1Q8NGK4 314 aa17.1■□□□□ 0.33
SAMM50-201ENST00000350028 DPF3Q92784 378 aa17.1■□□□□ 0.33
SAMM50-201ENST00000350028 RMDN2Q96LZ7 410 aa17.1■□□□□ 0.33
SAMM50-201ENST00000350028 SERPINB11Q96P15 392 aa17.1■□□□□ 0.33
SAMM50-201ENST00000350028 GORASP1Q9BQQ3 440 aa17.1■□□□□ 0.33
SAMM50-201ENST00000350028 C12orf65Q9H3J6 166 aaKnown RBP17.1■□□□□ 0.33
SAMM50-201ENST00000350028 DNAJB4Q9UDY4 337 aa17.1■□□□□ 0.33
SAMM50-201ENST00000350028 SFMBT1Q9UHJ3 866 aa17.1■□□□□ 0.33
SAMM50-201ENST00000350028 PRG3Q9Y2Y8 225 aaPredicted RBP17.1■□□□□ 0.33
SAMM50-201ENST00000350028 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.09■□□□□ 0.33
SAMM50-201ENST00000350028 A0A1W2PQH9 124 aa17.09■□□□□ 0.33
SAMM50-201ENST00000350028 MAGEB16A2A368 324 aa17.09■□□□□ 0.33
SAMM50-201ENST00000350028 OR6C75A6NL08 312 aa17.09■□□□□ 0.33
SAMM50-201ENST00000350028 TROVE2P10155 538 aaKnown RBP eCLIP17.09■□□□□ 0.33
SAMM50-201ENST00000350028 SERPINB4P48594 390 aa17.09■□□□□ 0.33
SAMM50-201ENST00000350028 ZBTB17Q13105 803 aa17.09■□□□□ 0.33
SAMM50-201ENST00000350028 BFSP2Q13515 415 aa17.09■□□□□ 0.33
SAMM50-201ENST00000350028 BMPR2Q13873 1038 aa17.09■□□□□ 0.33
SAMM50-201ENST00000350028 FRG1Q14331 258 aaKnown RBP17.09■□□□□ 0.33
SAMM50-201ENST00000350028 ARHGEF6Q15052 776 aa17.09■□□□□ 0.33
SAMM50-201ENST00000350028 VARS2Q5ST30 1063 aaKnown RBP17.09■□□□□ 0.33
SAMM50-201ENST00000350028 MSANTD2Q6P1R3 559 aa17.09■□□□□ 0.33
SAMM50-201ENST00000350028 ABI1Q8IZP0 508 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms