RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 RNF180Q86T96 592 aa14.25□□□□□ -0.13
TRIM4-201ENST00000349062 CIR1Q86X95 450 aaPredicted RBP14.25□□□□□ -0.13
TRIM4-201ENST00000349062 SH3TC2Q8TF17 1288 aa14.25□□□□□ -0.13
TRIM4-201ENST00000349062 GIPC2Q8TF65 315 aa14.25□□□□□ -0.13
TRIM4-201ENST00000349062 SLC44A1Q8WWI5 657 aa14.25□□□□□ -0.13
TRIM4-201ENST00000349062 RILPQ96NA2 401 aa14.25□□□□□ -0.13
TRIM4-201ENST00000349062 NUDCD1Q96RS6 583 aa14.25□□□□□ -0.13
TRIM4-201ENST00000349062 EBNA1BP2Q99848 306 aaKnown RBP14.25□□□□□ -0.13
TRIM4-201ENST00000349062 RTP3Q9BQQ7 232 aa14.25□□□□□ -0.13
TRIM4-201ENST00000349062 TSSK1BQ9BXA7 367 aa14.25□□□□□ -0.13
TRIM4-201ENST00000349062 STARD7Q9NQZ5 370 aa14.25□□□□□ -0.13
TRIM4-201ENST00000349062 EURLQ9NYK6 297 aa14.25□□□□□ -0.13
TRIM4-201ENST00000349062 ZNF638Q14966 1978 aaKnown RBP14.25□□□□□ -0.13
TRIM4-201ENST00000349062 ZSWIM8A7E2V4 1837 aa14.25□□□□□ -0.13
TRIM4-201ENST00000349062 PQBP1O60828 265 aaKnown RBP14.25□□□□□ -0.13
TRIM4-201ENST00000349062 TCEA3O75764 348 aa14.25□□□□□ -0.13
TRIM4-201ENST00000349062 ACLYP53396 1101 aa14.25□□□□□ -0.13
TRIM4-201ENST00000349062 SLC5A3P53794 718 aa14.25□□□□□ -0.13
TRIM4-201ENST00000349062 CCL23P55773 120 aa14.25□□□□□ -0.13
TRIM4-201ENST00000349062 MGAT5BQ3V5L5 792 aa14.25□□□□□ -0.13
TRIM4-201ENST00000349062 SPATA6LQ8N4H0 392 aa14.25□□□□□ -0.13
TRIM4-201ENST00000349062 RSPH1Q8WYR4 309 aa14.25□□□□□ -0.13
TRIM4-201ENST00000349062 FAM136AQ96C01 138 aa14.25□□□□□ -0.13
TRIM4-201ENST00000349062 PABPC5Q96DU9 382 aaKnown RBP14.25□□□□□ -0.13
TRIM4-201ENST00000349062 NAF1Q96HR8 494 aaKnown RBP14.25□□□□□ -0.13
TRIM4-201ENST00000349062 SIGLEC10Q96LC7 697 aa14.25□□□□□ -0.13
TRIM4-201ENST00000349062 AGAP2Q99490 1192 aa14.25□□□□□ -0.13
TRIM4-201ENST00000349062 EPAS1Q99814 870 aa14.25□□□□□ -0.13
TRIM4-201ENST00000349062 DMAP1Q9NPF5 467 aaPredicted RBP14.25□□□□□ -0.13
TRIM4-201ENST00000349062 NDFIP2Q9NV92 336 aa14.25□□□□□ -0.13
TRIM4-201ENST00000349062 CPSF2Q9P2I0 782 aaKnown RBP14.25□□□□□ -0.13
TRIM4-201ENST00000349062 CDH9Q9ULB4 789 aa14.25□□□□□ -0.13
TRIM4-201ENST00000349062 FAM237BA0A1B0GVD1 139 aa14.24□□□□□ -0.13
TRIM4-201ENST00000349062 ARHGAP42A6NI28 874 aa14.24□□□□□ -0.13
TRIM4-201ENST00000349062 FAM155AB1AL88 458 aaPredicted RBP14.24□□□□□ -0.13
TRIM4-201ENST00000349062 GABRDO14764 452 aa14.24□□□□□ -0.13
TRIM4-201ENST00000349062 TYROBPO43914 113 aa14.24□□□□□ -0.13
TRIM4-201ENST00000349062 ZBTB17Q13105 803 aa14.24□□□□□ -0.13
TRIM4-201ENST00000349062 DLG2Q15700 870 aa14.24□□□□□ -0.13
TRIM4-201ENST00000349062 NOMO2Q5JPE7 1267 aa14.24□□□□□ -0.13
TRIM4-201ENST00000349062 TTC39BQ5VTQ0 682 aaPredicted RBP14.24□□□□□ -0.13
TRIM4-201ENST00000349062 ZNF483Q8TF39 744 aaPredicted RBP14.24□□□□□ -0.13
TRIM4-201ENST00000349062 BATF3Q9NR55 127 aa14.24□□□□□ -0.13
TRIM4-201ENST00000349062 GIT1Q9Y2X7 761 aa14.24□□□□□ -0.13
TRIM4-201ENST00000349062 A0A1W2PQH9 124 aa14.24□□□□□ -0.13
TRIM4-201ENST00000349062 DNAJC6O75061 913 aa14.24□□□□□ -0.13
TRIM4-201ENST00000349062 ADAMTS4O75173 837 aa14.24□□□□□ -0.13
TRIM4-201ENST00000349062 RPL17P18621 184 aaKnown RBP14.24□□□□□ -0.13
TRIM4-201ENST00000349062 WASHC5Q12768 1159 aa14.24□□□□□ -0.13
TRIM4-201ENST00000349062 TUSC3Q13454 348 aa14.24□□□□□ -0.13
TRIM4-201ENST00000349062 ZNF534Q76KX8 674 aa14.24□□□□□ -0.13
TRIM4-201ENST00000349062 TMCO2Q7Z6W1 182 aaPredicted RBP14.24□□□□□ -0.13
TRIM4-201ENST00000349062 NUDCD3Q8IVD9 361 aa14.24□□□□□ -0.13
TRIM4-201ENST00000349062 ARID3BQ8IVW6 561 aaPredicted RBP14.24□□□□□ -0.13
TRIM4-201ENST00000349062 TNS4Q8IZW8 715 aa14.24□□□□□ -0.13
TRIM4-201ENST00000349062 GSDMBQ8TAX9 411 aa14.24□□□□□ -0.13
TRIM4-201ENST00000349062 CENPIQ92674 756 aaPredicted RBP14.24□□□□□ -0.13
TRIM4-201ENST00000349062 PRR11Q96HE9 360 aaPredicted RBP14.24□□□□□ -0.13
TRIM4-201ENST00000349062 SCLYQ96I15 445 aa14.24□□□□□ -0.13
TRIM4-201ENST00000349062 ZNF778Q96MU6 729 aa14.24□□□□□ -0.13
TRIM4-201ENST00000349062 CHRAC1Q9NRG0 131 aa14.24□□□□□ -0.13
TRIM4-201ENST00000349062 A0A0U1RQF3 1178 aa14.23□□□□□ -0.13
TRIM4-201ENST00000349062 SDR42E2A6NKP2 422 aa14.23□□□□□ -0.13
TRIM4-201ENST00000349062 CCL22O00626 93 aa14.23□□□□□ -0.13
TRIM4-201ENST00000349062 LYPLA1O75608 230 aaPredicted RBP14.23□□□□□ -0.13
TRIM4-201ENST00000349062 KRT38O76015 456 aa14.23□□□□□ -0.13
TRIM4-201ENST00000349062 TYK2P29597 1187 aa14.23□□□□□ -0.13
TRIM4-201ENST00000349062 ALDH3A1P30838 453 aa14.23□□□□□ -0.13
TRIM4-201ENST00000349062 SERPINB4P48594 390 aa14.23□□□□□ -0.13
TRIM4-201ENST00000349062 POLE2P56282 527 aa14.23□□□□□ -0.13
TRIM4-201ENST00000349062 INHBEP58166 350 aa14.23□□□□□ -0.13
TRIM4-201ENST00000349062 IRX1P78414 480 aaPredicted RBP14.23□□□□□ -0.13
TRIM4-201ENST00000349062 INTS6LQ5JSJ4 861 aaKnown RBP14.23□□□□□ -0.13
TRIM4-201ENST00000349062 LGSNQ5TDP6 509 aa14.23□□□□□ -0.13
TRIM4-201ENST00000349062 RELL1Q8IUW5 271 aa14.23□□□□□ -0.13
TRIM4-201ENST00000349062 CASP10Q92851 521 aa14.23□□□□□ -0.13
TRIM4-201ENST00000349062 NMUR1Q9HB89 426 aa14.23□□□□□ -0.13
TRIM4-201ENST00000349062 E7ESA3 106 aa14.23□□□□□ -0.13
TRIM4-201ENST00000349062 TRDMT1O14717 391 aaKnown RBP14.23□□□□□ -0.13
TRIM4-201ENST00000349062 BUD23O43709 281 aaKnown RBP14.23□□□□□ -0.13
TRIM4-201ENST00000349062 ENTPD5O75356 428 aa14.23□□□□□ -0.13
TRIM4-201ENST00000349062 TROVE2P10155 538 aaKnown RBP eCLIP14.23□□□□□ -0.13
TRIM4-201ENST00000349062 GLRBP48167 497 aa14.23□□□□□ -0.13
TRIM4-201ENST00000349062 BNIP1Q12981 228 aa14.23□□□□□ -0.13
TRIM4-201ENST00000349062 PCBP1Q15365 356 aaKnown RBP eCLIP14.23□□□□□ -0.13
TRIM4-201ENST00000349062 PDK4Q16654 411 aa14.23□□□□□ -0.13
TRIM4-201ENST00000349062 MUM1Q2TAK8 710 aa14.23□□□□□ -0.13
TRIM4-201ENST00000349062 TAF1BQ53T94 588 aaPredicted RBP14.23□□□□□ -0.13
TRIM4-201ENST00000349062 BANPQ8N9N5 519 aa14.23□□□□□ -0.13
TRIM4-201ENST00000349062 KLHL5Q96PQ7 755 aa14.23□□□□□ -0.13
TRIM4-201ENST00000349062 NACA2Q9H009 215 aa14.23□□□□□ -0.13
TRIM4-201ENST00000349062 WDR6Q9NNW5 1121 aaKnown RBP14.23□□□□□ -0.13
TRIM4-201ENST00000349062 CNGB3Q9NQW8 809 aa14.23□□□□□ -0.13
TRIM4-201ENST00000349062 HEY2Q9UBP5 337 aa14.23□□□□□ -0.13
TRIM4-201ENST00000349062 NR2C2P49116 596 aa14.23□□□□□ -0.13
TRIM4-201ENST00000349062 XKR4Q5GH76 650 aa14.23□□□□□ -0.13
TRIM4-201ENST00000349062 RAPH1Q70E73 1250 aa14.23□□□□□ -0.13
TRIM4-201ENST00000349062 NLRP9Q7RTR0 991 aa14.23□□□□□ -0.13
TRIM4-201ENST00000349062 TTC7BQ86TV6 843 aa14.23□□□□□ -0.13
TRIM4-201ENST00000349062 DTX3LQ8TDB6 740 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms