RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 ID4P47928 161 aa16.25■□□□□ 0.19
TSPAN4-201ENST00000346501 ECT2LQ008S8 904 aa16.25■□□□□ 0.19
TSPAN4-201ENST00000346501 MAP7D1Q3KQU3 841 aa16.25■□□□□ 0.19
TSPAN4-201ENST00000346501 PLEKHG6Q3KR16 790 aa16.25■□□□□ 0.19
TSPAN4-201ENST00000346501 TTC31Q49AM3 519 aaPredicted RBP16.25■□□□□ 0.19
TSPAN4-201ENST00000346501 AASDHQ4L235 1098 aaPredicted RBP16.25■□□□□ 0.19
TSPAN4-201ENST00000346501 TDRD12Q587J7 1177 aaKnown RBP16.25■□□□□ 0.19
TSPAN4-201ENST00000346501 SYCP2LQ5T4T6 812 aa16.25■□□□□ 0.19
TSPAN4-201ENST00000346501 PRR23CQ6ZRP0 262 aa16.25■□□□□ 0.19
TSPAN4-201ENST00000346501 STRADAQ7RTN6 431 aa16.25■□□□□ 0.19
TSPAN4-201ENST00000346501 IRF2BP2Q7Z5L9 587 aa16.25■□□□□ 0.19
TSPAN4-201ENST00000346501 RABEPKQ7Z6M1 372 aa16.25■□□□□ 0.19
TSPAN4-201ENST00000346501 FAM131BQ86XD5 332 aa16.25■□□□□ 0.19
TSPAN4-201ENST00000346501 FOXJ1Q92949 421 aa16.25■□□□□ 0.19
TSPAN4-201ENST00000346501 TRIM11Q96F44 468 aa16.25■□□□□ 0.19
TSPAN4-201ENST00000346501 MUC3BQ9H195 1237 aa16.25■□□□□ 0.19
TSPAN4-201ENST00000346501 SLC25A13Q9UJS0 675 aa16.25■□□□□ 0.19
TSPAN4-201ENST00000346501 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.25■□□□□ 0.19
TSPAN4-201ENST00000346501 GVINP1Q7Z2Y8 2422 aa16.24■□□□□ 0.19
TSPAN4-201ENST00000346501 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.24■□□□□ 0.19
TSPAN4-201ENST00000346501 BCLAF3A2AJT9 711 aaKnown RBP16.24■□□□□ 0.19
TSPAN4-201ENST00000346501 C2CD4BA6NLJ0 364 aa16.24■□□□□ 0.19
TSPAN4-201ENST00000346501 SIGLEC16A6NMB1 481 aa16.24■□□□□ 0.19
TSPAN4-201ENST00000346501 DNTTP04053 509 aa16.24■□□□□ 0.19
TSPAN4-201ENST00000346501 RHOCP08134 193 aa16.24■□□□□ 0.19
TSPAN4-201ENST00000346501 TPM1P09493 284 aa16.24■□□□□ 0.19
TSPAN4-201ENST00000346501 ZNF806P0C7X5 589 aa16.24■□□□□ 0.19
TSPAN4-201ENST00000346501 HLA-EP13747 358 aa16.24■□□□□ 0.19
TSPAN4-201ENST00000346501 TFE3P19532 575 aaPredicted RBP16.24■□□□□ 0.19
TSPAN4-201ENST00000346501 BCKDHBP21953 392 aa16.24■□□□□ 0.19
TSPAN4-201ENST00000346501 KRT83P78385 493 aa16.24■□□□□ 0.19
TSPAN4-201ENST00000346501 ZBTB16Q05516 673 aa16.24■□□□□ 0.19
TSPAN4-201ENST00000346501 CAMK2GQ13555 558 aaPredicted RBP16.24■□□□□ 0.19
TSPAN4-201ENST00000346501 FSCBQ5H9T9 825 aa16.24■□□□□ 0.19
TSPAN4-201ENST00000346501 C6orf118Q5T5N4 469 aa16.24■□□□□ 0.19
TSPAN4-201ENST00000346501 LYSMD4Q5XG99 296 aa16.24■□□□□ 0.19
TSPAN4-201ENST00000346501 MON1BQ7L1V2 547 aa16.24■□□□□ 0.19
TSPAN4-201ENST00000346501 CIR1Q86X95 450 aaPredicted RBP16.24■□□□□ 0.19
TSPAN4-201ENST00000346501 TMEFF1Q8IYR6 380 aa16.24■□□□□ 0.19
TSPAN4-201ENST00000346501 PIGKQ92643 395 aa16.24■□□□□ 0.19
TSPAN4-201ENST00000346501 MYEOVQ96EZ4 313 aa16.24■□□□□ 0.19
TSPAN4-201ENST00000346501 TMEM245Q9H330 911 aa16.24■□□□□ 0.19
TSPAN4-201ENST00000346501 HAUS4Q9H6D7 363 aa16.24■□□□□ 0.19
TSPAN4-201ENST00000346501 PARVAQ9NVD7 372 aa16.24■□□□□ 0.19
TSPAN4-201ENST00000346501 IFNKQ9P0W0 207 aa16.24■□□□□ 0.19
TSPAN4-201ENST00000346501 VPS28Q9UK41 221 aa16.24■□□□□ 0.19
TSPAN4-201ENST00000346501 ERVW-1Q9UQF0 538 aa16.24■□□□□ 0.19
TSPAN4-201ENST00000346501 NCKAP1Q9Y2A7 1128 aa16.24■□□□□ 0.19
TSPAN4-201ENST00000346501 LUC7L2Q9Y383 392 aaKnown RBP16.24■□□□□ 0.19
TSPAN4-201ENST00000346501 SDK1Q7Z5N4 2213 aa16.24■□□□□ 0.19
TSPAN4-201ENST00000346501 IGHV1OR15-9A0A0B4J2B8 117 aa16.23■□□□□ 0.19
TSPAN4-201ENST00000346501 EDDM13A0A1B0GTR0 161 aa16.23■□□□□ 0.19
TSPAN4-201ENST00000346501 A0A1W2PQJ5 194 aa16.23■□□□□ 0.19
TSPAN4-201ENST00000346501 TARSL2A2RTX5 802 aaKnown RBP16.23■□□□□ 0.19
TSPAN4-201ENST00000346501 TMCO5BA8MYB1 307 aa16.23■□□□□ 0.19
TSPAN4-201ENST00000346501 KHNYNO15037 678 aaKnown RBP16.23■□□□□ 0.19
TSPAN4-201ENST00000346501 SRGAP2O75044 1071 aa16.23■□□□□ 0.19
TSPAN4-201ENST00000346501 ENDOD1O94919 500 aa16.23■□□□□ 0.19
TSPAN4-201ENST00000346501 GZMAP12544 262 aa16.23■□□□□ 0.19
TSPAN4-201ENST00000346501 CD6P30203 668 aa16.23■□□□□ 0.19
TSPAN4-201ENST00000346501 PRKCIP41743 596 aa16.23■□□□□ 0.19
TSPAN4-201ENST00000346501 PLK1P53350 603 aa16.23■□□□□ 0.19
TSPAN4-201ENST00000346501 TSR1Q2NL82 804 aaKnown RBP16.23■□□□□ 0.19
TSPAN4-201ENST00000346501 CCDC14Q49A88 953 aa16.23■□□□□ 0.19
TSPAN4-201ENST00000346501 OTUD1Q5VV17 481 aaPredicted RBP16.23■□□□□ 0.19
TSPAN4-201ENST00000346501 ZNF776Q68DI1 518 aaPredicted RBP16.23■□□□□ 0.19
TSPAN4-201ENST00000346501 SETD3Q86TU7 594 aaPredicted RBP16.23■□□□□ 0.19
TSPAN4-201ENST00000346501 MCOLN2Q8IZK6 566 aa16.23■□□□□ 0.19
TSPAN4-201ENST00000346501 FAM172AQ8WUF8 416 aa16.23■□□□□ 0.19
TSPAN4-201ENST00000346501 IGSF8Q969P0 613 aa16.23■□□□□ 0.19
TSPAN4-201ENST00000346501 C2orf49Q9BVC5 232 aaPredicted RBP16.23■□□□□ 0.19
TSPAN4-201ENST00000346501 MKRN2Q9H000 416 aaKnown RBP16.23■□□□□ 0.19
TSPAN4-201ENST00000346501 ITM2CQ9NQX7 267 aa16.23■□□□□ 0.19
TSPAN4-201ENST00000346501 SCML1Q9UN30 329 aa16.23■□□□□ 0.19
TSPAN4-201ENST00000346501 FARP1Q9Y4F1 1045 aaPredicted RBP16.23■□□□□ 0.19
TSPAN4-201ENST00000346501 RALGAPA1Q6GYQ0 2036 aa16.23■□□□□ 0.19
TSPAN4-201ENST00000346501 E9PAM4 449 aa16.22■□□□□ 0.19
TSPAN4-201ENST00000346501 OR1E1P30953 314 aa16.22■□□□□ 0.19
TSPAN4-201ENST00000346501 RFC1P35251 1148 aaPredicted RBP16.22■□□□□ 0.19
TSPAN4-201ENST00000346501 ADRA1BP35368 520 aa16.22■□□□□ 0.19
TSPAN4-201ENST00000346501 HOXD12P35452 270 aa16.22■□□□□ 0.19
TSPAN4-201ENST00000346501 ETFBP38117 255 aa16.22■□□□□ 0.19
TSPAN4-201ENST00000346501 GGCXP38435 758 aa16.22■□□□□ 0.19
TSPAN4-201ENST00000346501 ZBED6P86452 979 aa16.22■□□□□ 0.19
TSPAN4-201ENST00000346501 PTP4A2Q12974 167 aa16.22■□□□□ 0.19
TSPAN4-201ENST00000346501 PUM1Q14671 1186 aaKnown RBP eCLIP16.22■□□□□ 0.19
TSPAN4-201ENST00000346501 PTPRNQ16849 979 aa16.22■□□□□ 0.19
TSPAN4-201ENST00000346501 C15orf59Q2T9L4 293 aaPredicted RBP16.22■□□□□ 0.19
TSPAN4-201ENST00000346501 HNRNPA1L2Q32P51 320 aaKnown RBP16.22■□□□□ 0.19
TSPAN4-201ENST00000346501 C5orf22Q49AR2 442 aa16.22■□□□□ 0.19
TSPAN4-201ENST00000346501 ACCSLQ4AC99 568 aa16.22■□□□□ 0.19
TSPAN4-201ENST00000346501 WDR45BQ5MNZ6 344 aa16.22■□□□□ 0.19
TSPAN4-201ENST00000346501 SCYL2Q6P3W7 929 aa16.22■□□□□ 0.19
TSPAN4-201ENST00000346501 WDR59Q6PJI9 974 aa16.22■□□□□ 0.19
TSPAN4-201ENST00000346501 ARMCX6Q7L4S7 300 aa16.22■□□□□ 0.19
TSPAN4-201ENST00000346501 DSG4Q86SJ6 1040 aa16.22■□□□□ 0.19
TSPAN4-201ENST00000346501 SYT12Q8IV01 421 aa16.22■□□□□ 0.19
TSPAN4-201ENST00000346501 RGL4Q8IZJ4 473 aa16.22■□□□□ 0.19
TSPAN4-201ENST00000346501 APCDD1Q8J025 514 aa16.22■□□□□ 0.19
TSPAN4-201ENST00000346501 ZNF366Q8N895 744 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms