RNA–Protein interactions for RNA: ENST00000345865.6

UPF3B-202, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3B, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-202ENST00000345865 KYAT3Q6YP21 454 aaKnown RBP15.83■□□□□ 0.12
UPF3B-202ENST00000345865 CCNJLQ8IV13 435 aa15.83■□□□□ 0.12
UPF3B-202ENST00000345865 KCNV2Q8TDN2 545 aa15.83■□□□□ 0.12
UPF3B-202ENST00000345865 CDKL2Q92772 493 aa15.83■□□□□ 0.12
UPF3B-202ENST00000345865 CERS2Q96G23 380 aa15.83■□□□□ 0.12
UPF3B-202ENST00000345865 APBA2Q99767 749 aa15.83■□□□□ 0.12
UPF3B-202ENST00000345865 EBF4Q9BQW3 602 aa15.83■□□□□ 0.12
UPF3B-202ENST00000345865 TACO1Q9BSH4 297 aaKnown RBP15.83■□□□□ 0.12
UPF3B-202ENST00000345865 MLPHQ9BV36 600 aaPredicted RBP15.83■□□□□ 0.12
UPF3B-202ENST00000345865 CDH9Q9ULB4 789 aa15.83■□□□□ 0.12
UPF3B-202ENST00000345865 E2F8A0AVK6 867 aa15.82■□□□□ 0.12
UPF3B-202ENST00000345865 MGEA5O60502 916 aa15.82■□□□□ 0.12
UPF3B-202ENST00000345865 PLIN3O60664 434 aa15.82■□□□□ 0.12
UPF3B-202ENST00000345865 HNRNPCL1O60812 293 aaKnown RBP15.82■□□□□ 0.12
UPF3B-202ENST00000345865 AP2A1O95782 977 aa15.82■□□□□ 0.12
UPF3B-202ENST00000345865 PGK1P00558 417 aa15.82■□□□□ 0.12
UPF3B-202ENST00000345865 GNAZP19086 355 aa15.82■□□□□ 0.12
UPF3B-202ENST00000345865 STX3Q13277 289 aa15.82■□□□□ 0.12
UPF3B-202ENST00000345865 FAM91A1Q658Y4 838 aa15.82■□□□□ 0.12
UPF3B-202ENST00000345865 C4orf50Q6ZRC1 276 aa15.82■□□□□ 0.12
UPF3B-202ENST00000345865 RASSF3Q86WH2 238 aa15.82■□□□□ 0.12
UPF3B-202ENST00000345865 FBXO27Q8NI29 283 aa15.82■□□□□ 0.12
UPF3B-202ENST00000345865 ZSCAN18Q8TBC5 510 aaPredicted RBP15.82■□□□□ 0.12
UPF3B-202ENST00000345865 ACMSDQ8TDX5 336 aa15.82■□□□□ 0.12
UPF3B-202ENST00000345865 DPF3Q92784 378 aa15.82■□□□□ 0.12
UPF3B-202ENST00000345865 MYLPFQ96A32 169 aa15.82■□□□□ 0.12
UPF3B-202ENST00000345865 AZIN2Q96A70 460 aa15.82■□□□□ 0.12
UPF3B-202ENST00000345865 FERMT1Q9BQL6 677 aa15.82■□□□□ 0.12
UPF3B-202ENST00000345865 NAT9Q9BTE0 207 aa15.82■□□□□ 0.12
UPF3B-202ENST00000345865 TKTL2Q9H0I9 626 aa15.82■□□□□ 0.12
UPF3B-202ENST00000345865 RRAGCQ9HB90 399 aa15.82■□□□□ 0.12
UPF3B-202ENST00000345865 TMLHEQ9NVH6 421 aa15.82■□□□□ 0.12
UPF3B-202ENST00000345865 ZNF358Q9NW07 568 aa15.82■□□□□ 0.12
UPF3B-202ENST00000345865 ZFATQ9P243 1243 aa15.82■□□□□ 0.12
UPF3B-202ENST00000345865 OR12D3Q9UGF7 316 aa15.82■□□□□ 0.12
UPF3B-202ENST00000345865 MAGED2Q9UNF1 606 aaPredicted RBP15.82■□□□□ 0.12
UPF3B-202ENST00000345865 M0QZ92 97 aa15.82■□□□□ 0.12
UPF3B-202ENST00000345865 LRIG2O94898 1065 aa15.82■□□□□ 0.12
UPF3B-202ENST00000345865 POLBP06746 335 aa15.82■□□□□ 0.12
UPF3B-202ENST00000345865 TPBGLP0DKB5 382 aa15.82■□□□□ 0.12
UPF3B-202ENST00000345865 AKR1A1P14550 325 aa15.82■□□□□ 0.12
UPF3B-202ENST00000345865 CALB2P22676 271 aa15.82■□□□□ 0.12
UPF3B-202ENST00000345865 ARRB2P32121 409 aa15.82■□□□□ 0.12
UPF3B-202ENST00000345865 CPA2P48052 419 aa15.82■□□□□ 0.12
UPF3B-202ENST00000345865 HCAR3P49019 387 aa15.82■□□□□ 0.12
UPF3B-202ENST00000345865 CXCR3P49682 368 aa15.82■□□□□ 0.12
UPF3B-202ENST00000345865 PCLAFQ15004 111 aa15.82■□□□□ 0.12
UPF3B-202ENST00000345865 STXBP5Q5T5C0 1151 aa15.82■□□□□ 0.12
UPF3B-202ENST00000345865 CMC1Q7Z7K0 106 aa15.82■□□□□ 0.12
UPF3B-202ENST00000345865 CRLF3Q8IUI8 442 aa15.82■□□□□ 0.12
UPF3B-202ENST00000345865 RAB3IL1Q8TBN0 382 aa15.82■□□□□ 0.12
UPF3B-202ENST00000345865 SMARCD1Q96GM5 515 aa15.82■□□□□ 0.12
UPF3B-202ENST00000345865 ZNF570Q96NI8 536 aa15.82■□□□□ 0.12
UPF3B-202ENST00000345865 AGAP2Q99490 1192 aa15.82■□□□□ 0.12
UPF3B-202ENST00000345865 WDCPQ9H6R7 721 aa15.82■□□□□ 0.12
UPF3B-202ENST00000345865 CSNK1G1Q9HCP0 422 aa15.82■□□□□ 0.12
UPF3B-202ENST00000345865 PTCH2Q9Y6C5 1203 aa15.82■□□□□ 0.12
UPF3B-202ENST00000345865 TTC3P53804 2025 aa15.81■□□□□ 0.12
UPF3B-202ENST00000345865 ZCWPW2A0A1B0GU75 182 aa15.81■□□□□ 0.12
UPF3B-202ENST00000345865 DUSP11O75319 330 aaKnown RBP15.81■□□□□ 0.12
UPF3B-202ENST00000345865 BDNFP23560 247 aa15.81■□□□□ 0.12
UPF3B-202ENST00000345865 BRCC3P46736 316 aa15.81■□□□□ 0.12
UPF3B-202ENST00000345865 PDE1BQ01064 536 aa15.81■□□□□ 0.12
UPF3B-202ENST00000345865 WASHC2DQ5SRD0 308 aa15.81■□□□□ 0.12
UPF3B-202ENST00000345865 CERCAMQ5T4B2 595 aa15.81■□□□□ 0.12
UPF3B-202ENST00000345865 TEDDM1Q5T9Z0 273 aa15.81■□□□□ 0.12
UPF3B-202ENST00000345865 CD300LGQ6UXG3 332 aa15.81■□□□□ 0.12
UPF3B-202ENST00000345865 TMEM135Q86UB9 458 aa15.81■□□□□ 0.12
UPF3B-202ENST00000345865 TAC4Q86UU9 113 aa15.81■□□□□ 0.12
UPF3B-202ENST00000345865 RASAL3Q86YV0 1011 aa15.81■□□□□ 0.12
UPF3B-202ENST00000345865 HASPINQ8TF76 798 aa15.81■□□□□ 0.12
UPF3B-202ENST00000345865 MFSD3Q96ES6 412 aa15.81■□□□□ 0.12
UPF3B-202ENST00000345865 ATXN7L3BQ96GX2 97 aa15.81■□□□□ 0.12
UPF3B-202ENST00000345865 NUDCD1Q96RS6 583 aa15.81■□□□□ 0.12
UPF3B-202ENST00000345865 TMEM209Q96SK2 561 aa15.81■□□□□ 0.12
UPF3B-202ENST00000345865 APOL2Q9BQE5 337 aa15.81■□□□□ 0.12
UPF3B-202ENST00000345865 CASS4Q9NQ75 786 aa15.81■□□□□ 0.12
UPF3B-202ENST00000345865 THAP1Q9NVV9 213 aa15.81■□□□□ 0.12
UPF3B-202ENST00000345865 TMEM216Q9P0N5 145 aa15.81■□□□□ 0.12
UPF3B-202ENST00000345865 VANGL2Q9ULK5 521 aa15.81■□□□□ 0.12
UPF3B-202ENST00000345865 GYG2O15488 501 aa15.8■□□□□ 0.12
UPF3B-202ENST00000345865 GLRA3O75311 464 aa15.8■□□□□ 0.12
UPF3B-202ENST00000345865 POMCP01189 267 aa15.8■□□□□ 0.12
UPF3B-202ENST00000345865 ESRRAP11474 423 aaPredicted RBP15.8■□□□□ 0.12
UPF3B-202ENST00000345865 GARSP41250 739 aaKnown RBP15.8■□□□□ 0.12
UPF3B-202ENST00000345865 GALNT2Q10471 571 aa15.8■□□□□ 0.12
UPF3B-202ENST00000345865 KHDC1Q4VXA5 237 aaKnown RBP15.8■□□□□ 0.12
UPF3B-202ENST00000345865 SPANXN3Q5MJ09 141 aa15.8■□□□□ 0.12
UPF3B-202ENST00000345865 LRRTM3Q86VH5 581 aa15.8■□□□□ 0.12
UPF3B-202ENST00000345865 ZNF669Q96BR6 464 aaPredicted RBP15.8■□□□□ 0.12
UPF3B-202ENST00000345865 HDAC11Q96DB2 347 aa15.8■□□□□ 0.12
UPF3B-202ENST00000345865 CELF6Q96J87 481 aaKnown RBP15.8■□□□□ 0.12
UPF3B-202ENST00000345865 MTG1Q9BT17 334 aaPredicted RBP15.8■□□□□ 0.12
UPF3B-202ENST00000345865 TUBB6Q9BUF5 446 aa15.8■□□□□ 0.12
UPF3B-202ENST00000345865 UBP1Q9NZI7 540 aa15.8■□□□□ 0.12
UPF3B-202ENST00000345865 PPARGC1AQ9UBK2 798 aaKnown RBP15.8■□□□□ 0.12
UPF3B-202ENST00000345865 COL4A4P53420 1690 aaPredicted RBP15.8■□□□□ 0.12
UPF3B-202ENST00000345865 H0Y3Z8 333 aa15.8■□□□□ 0.12
UPF3B-202ENST00000345865 PROCP04070 461 aa15.8■□□□□ 0.12
UPF3B-202ENST00000345865 NFKB1P19838 968 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms