RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 CDC26Q8NHZ8 85 aa4.88□□□□□ -1.63
CSMD3-203ENST00000343508 DUX4Q9UBX2 424 aa4.88□□□□□ -1.63
CSMD3-203ENST00000343508 C3orf18Q9UK00 162 aa4.88□□□□□ -1.63
CSMD3-203ENST00000343508 M0R2N6 131 aa4.88□□□□□ -1.63
CSMD3-203ENST00000343508 RAD51BO15315 384 aa4.88□□□□□ -1.63
CSMD3-203ENST00000343508 TRUB2O95900 331 aaKnown RBP4.88□□□□□ -1.63
CSMD3-203ENST00000343508 ITGA2BP08514 1039 aa4.88□□□□□ -1.63
CSMD3-203ENST00000343508 RAD51Q06609 339 aa4.88□□□□□ -1.63
CSMD3-203ENST00000343508 OTUD3Q5T2D3 398 aaPredicted RBP4.88□□□□□ -1.63
CSMD3-203ENST00000343508 DEPDC1Q5TB30 811 aa4.88□□□□□ -1.63
CSMD3-203ENST00000343508 TXNRD3Q86VQ6 643 aa4.88□□□□□ -1.63
CSMD3-203ENST00000343508 MAGEE2Q8TD90 523 aaPredicted RBP4.88□□□□□ -1.63
CSMD3-203ENST00000343508 RXFP2Q8WXD0 754 aa4.88□□□□□ -1.63
CSMD3-203ENST00000343508 AGBL1Q96MI9 1066 aa4.88□□□□□ -1.63
CSMD3-203ENST00000343508 OLFM1Q99784 485 aa4.88□□□□□ -1.63
CSMD3-203ENST00000343508 MUC13Q9H3R2 512 aa4.88□□□□□ -1.63
CSMD3-203ENST00000343508 SYTL2Q9HCH5 934 aa4.88□□□□□ -1.63
CSMD3-203ENST00000343508 SPATA31A1Q5TZJ5 1347 aa4.88□□□□□ -1.63
CSMD3-203ENST00000343508 MLNP12872 115 aa4.88□□□□□ -1.63
CSMD3-203ENST00000343508 RPL7AP62424 266 aaKnown RBP4.88□□□□□ -1.63
CSMD3-203ENST00000343508 ZNF235Q14590 738 aa4.88□□□□□ -1.63
CSMD3-203ENST00000343508 KLHDC10Q6PID8 442 aa4.88□□□□□ -1.63
CSMD3-203ENST00000343508 EFHBQ8N7U6 833 aa4.88□□□□□ -1.63
CSMD3-203ENST00000343508 ZNF280CQ8ND82 737 aa4.88□□□□□ -1.63
CSMD3-203ENST00000343508 SLC10A4Q96EP9 437 aa4.88□□□□□ -1.63
CSMD3-203ENST00000343508 OTUB1Q96FW1 271 aaPredicted RBP4.88□□□□□ -1.63
CSMD3-203ENST00000343508 BBS2Q9BXC9 721 aa4.88□□□□□ -1.63
CSMD3-203ENST00000343508 IMPAD1Q9NX62 359 aa4.88□□□□□ -1.63
CSMD3-203ENST00000343508 PRKAG3Q9UGI9 489 aa4.88□□□□□ -1.63
CSMD3-203ENST00000343508 ATF5Q9Y2D1 282 aaPredicted RBP4.88□□□□□ -1.63
CSMD3-203ENST00000343508 AKAP11Q9UKA4 1901 aa4.88□□□□□ -1.63
CSMD3-203ENST00000343508 G3V2T6 193 aa4.88□□□□□ -1.63
CSMD3-203ENST00000343508 NR5A2O00482 541 aa4.88□□□□□ -1.63
CSMD3-203ENST00000343508 HARS2P49590 506 aaKnown RBP4.88□□□□□ -1.63
CSMD3-203ENST00000343508 RGS4P49798 205 aa4.88□□□□□ -1.63
CSMD3-203ENST00000343508 AQP4P55087 323 aa4.88□□□□□ -1.63
CSMD3-203ENST00000343508 MAP3K7CLP57077 242 aa4.88□□□□□ -1.63
CSMD3-203ENST00000343508 NEDD8Q15843 81 aa4.88□□□□□ -1.63
CSMD3-203ENST00000343508 VSTM1Q6UX27 236 aa4.88□□□□□ -1.63
CSMD3-203ENST00000343508 PSTKQ8IV42 348 aaKnown RBP4.88□□□□□ -1.63
CSMD3-203ENST00000343508 SEPT12Q8IYM1 358 aa4.88□□□□□ -1.63
CSMD3-203ENST00000343508 ANKRD13AQ8IZ07 590 aa4.88□□□□□ -1.63
CSMD3-203ENST00000343508 MINDY2Q8NBR6 621 aa4.88□□□□□ -1.63
CSMD3-203ENST00000343508 ENOPH1Q9UHY7 261 aa4.88□□□□□ -1.63
CSMD3-203ENST00000343508 LRP6O75581 1613 aa4.88□□□□□ -1.63
CSMD3-203ENST00000343508 PKD1L3Q7Z443 1732 aa4.88□□□□□ -1.63
CSMD3-203ENST00000343508 BAIAP3O94812 1187 aa4.88□□□□□ -1.63
CSMD3-203ENST00000343508 APBA3O96018 575 aa4.88□□□□□ -1.63
CSMD3-203ENST00000343508 SNHG28P0DPA3 235 aa4.88□□□□□ -1.63
CSMD3-203ENST00000343508 GRIA4P48058 902 aa4.88□□□□□ -1.63
CSMD3-203ENST00000343508 RTP1P59025 263 aa4.88□□□□□ -1.63
CSMD3-203ENST00000343508 BST2Q10589 180 aaKnown RBP4.88□□□□□ -1.63
CSMD3-203ENST00000343508 SQLEQ14534 574 aa4.88□□□□□ -1.63
CSMD3-203ENST00000343508 BTBD8Q5XKL5 378 aa4.88□□□□□ -1.63
CSMD3-203ENST00000343508 PIWIL4Q7Z3Z4 852 aaKnown RBP4.88□□□□□ -1.63
CSMD3-203ENST00000343508 OTUD5Q96G74 571 aa4.88□□□□□ -1.63
CSMD3-203ENST00000343508 SYT15Q9BQS2 421 aa4.88□□□□□ -1.63
CSMD3-203ENST00000343508 ZBED2Q9BTP6 218 aa4.88□□□□□ -1.63
CSMD3-203ENST00000343508 RAD21L1Q9H4I0 556 aa4.88□□□□□ -1.63
CSMD3-203ENST00000343508 EBF3Q9H4W6 596 aa4.88□□□□□ -1.63
CSMD3-203ENST00000343508 SELENONQ9NZV5 590 aa4.88□□□□□ -1.63
CSMD3-203ENST00000343508 SLC13A4Q9UKG4 626 aa4.88□□□□□ -1.63
CSMD3-203ENST00000343508 A0A0A0MRY4 1105 aa4.88□□□□□ -1.63
CSMD3-203ENST00000343508 BCLAF3A2AJT9 711 aaKnown RBP4.88□□□□□ -1.63
CSMD3-203ENST00000343508 CAPN8A6NHC0 703 aa4.88□□□□□ -1.63
CSMD3-203ENST00000343508 BBIP1A8MTZ0 92 aa4.88□□□□□ -1.63
CSMD3-203ENST00000343508 HBP1O60381 514 aa4.88□□□□□ -1.63
CSMD3-203ENST00000343508 CNOT3O75175 753 aaKnown RBP4.88□□□□□ -1.63
CSMD3-203ENST00000343508 H6PDO95479 791 aa4.88□□□□□ -1.63
CSMD3-203ENST00000343508 KRT20P35900 424 aa4.88□□□□□ -1.63
CSMD3-203ENST00000343508 TWF2Q6IBS0 349 aaKnown RBP4.88□□□□□ -1.63
CSMD3-203ENST00000343508 KCNT2Q6UVM3 1135 aa4.88□□□□□ -1.63
CSMD3-203ENST00000343508 TAS2R42Q7RTR8 314 aa4.88□□□□□ -1.63
CSMD3-203ENST00000343508 APOBEC3FQ8IUX4 373 aaKnown RBP4.88□□□□□ -1.63
CSMD3-203ENST00000343508 ABI1Q8IZP0 508 aa4.88□□□□□ -1.63
CSMD3-203ENST00000343508 TAGAPQ8N103 731 aa4.88□□□□□ -1.63
CSMD3-203ENST00000343508 SPATA13Q96N96 652 aa4.88□□□□□ -1.63
CSMD3-203ENST00000343508 LHX5Q9H2C1 402 aa4.88□□□□□ -1.63
CSMD3-203ENST00000343508 TMEM245Q9H330 911 aa4.88□□□□□ -1.63
CSMD3-203ENST00000343508 XPNPEP3Q9NQH7 507 aa4.88□□□□□ -1.63
CSMD3-203ENST00000343508 SUPT3HB4E1H0 165 aa4.88□□□□□ -1.63
CSMD3-203ENST00000343508 PENKP01210 267 aaPredicted RBP4.88□□□□□ -1.63
CSMD3-203ENST00000343508 TGFB3P10600 412 aa4.88□□□□□ -1.63
CSMD3-203ENST00000343508 CAP2P40123 477 aa4.88□□□□□ -1.63
CSMD3-203ENST00000343508 USP46P62068 366 aa4.88□□□□□ -1.63
CSMD3-203ENST00000343508 NPY5RQ15761 445 aa4.88□□□□□ -1.63
CSMD3-203ENST00000343508 STXBP5Q5T5C0 1151 aa4.88□□□□□ -1.63
CSMD3-203ENST00000343508 VPS33AQ96AX1 596 aa4.88□□□□□ -1.63
CSMD3-203ENST00000343508 ABHD8Q96I13 439 aa4.88□□□□□ -1.63
CSMD3-203ENST00000343508 FBXO28Q9NVF7 368 aa4.88□□□□□ -1.63
CSMD3-203ENST00000343508 GGA3Q9NZ52 723 aa4.88□□□□□ -1.63
CSMD3-203ENST00000343508 POMPQ9Y244 141 aa4.88□□□□□ -1.63
CSMD3-203ENST00000343508 CYP51A1Q16850 503 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 MYO1HQ8N1T3 1032 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 BANPQ8N9N5 519 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 LINC00116Q8NCU8 138 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 IPMKQ8NFU5 416 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 HM13Q8TCT9 377 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 TAAR1Q96RJ0 339 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 HSD17B14Q9BPX1 270 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms