RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 EBNA1BP2Q99848 306 aaKnown RBP19.09■□□□□ 0.65
HOXA9-201ENST00000343483 PITPNM3Q9BZ71 974 aa19.09■□□□□ 0.65
HOXA9-201ENST00000343483 PCDH10Q9P2E7 1040 aa19.09■□□□□ 0.65
HOXA9-201ENST00000343483 GGT7Q9UJ14 662 aa19.09■□□□□ 0.65
HOXA9-201ENST00000343483 PATJQ8NI35 1801 aa19.09■□□□□ 0.65
HOXA9-201ENST00000343483 TYROBPO43914 113 aa19.09■□□□□ 0.65
HOXA9-201ENST00000343483 RASSF9O75901 435 aa19.09■□□□□ 0.65
HOXA9-201ENST00000343483 FGFR3P22607 806 aa19.09■□□□□ 0.65
HOXA9-201ENST00000343483 GARSP41250 739 aaKnown RBP19.09■□□□□ 0.65
HOXA9-201ENST00000343483 GALNT2Q10471 571 aa19.09■□□□□ 0.65
HOXA9-201ENST00000343483 CASC4Q6P4E1 433 aa19.09■□□□□ 0.65
HOXA9-201ENST00000343483 FAM47EQ6ZV65 393 aa19.09■□□□□ 0.65
HOXA9-201ENST00000343483 TMEM173Q86WV6 379 aaPredicted RBP19.09■□□□□ 0.65
HOXA9-201ENST00000343483 SLC44A1Q8WWI5 657 aa19.09■□□□□ 0.65
HOXA9-201ENST00000343483 GRAMD1AQ96CP6 724 aa19.09■□□□□ 0.65
HOXA9-201ENST00000343483 HAPLN3Q96S86 360 aa19.09■□□□□ 0.65
HOXA9-201ENST00000343483 PLCD4Q9BRC7 762 aa19.09■□□□□ 0.65
HOXA9-201ENST00000343483 MRPL9Q9BYD2 267 aaKnown RBP19.09■□□□□ 0.65
HOXA9-201ENST00000343483 PLAC1Q9HBJ0 212 aa19.09■□□□□ 0.65
HOXA9-201ENST00000343483 GMIPQ9P107 970 aa19.09■□□□□ 0.65
HOXA9-201ENST00000343483 OGDHLQ9ULD0 1010 aa19.09■□□□□ 0.65
HOXA9-201ENST00000343483 SLC27A5Q9Y2P5 690 aa19.09■□□□□ 0.65
HOXA9-201ENST00000343483 ZNF638Q14966 1978 aaKnown RBP19.08■□□□□ 0.64
HOXA9-201ENST00000343483 MAGEA11P43364 429 aa19.08■□□□□ 0.64
HOXA9-201ENST00000343483 PPM1NQ8N819 430 aa19.08■□□□□ 0.64
HOXA9-201ENST00000343483 HDAC11Q96DB2 347 aa19.08■□□□□ 0.64
HOXA9-201ENST00000343483 FCRL2Q96LA5 508 aaPredicted RBP19.08■□□□□ 0.64
HOXA9-201ENST00000343483 BRD8Q9H0E9 1235 aa19.08■□□□□ 0.64
HOXA9-201ENST00000343483 SSU72Q9NP77 194 aaKnown RBP19.08■□□□□ 0.64
HOXA9-201ENST00000343483 EIF2B3Q9NR50 452 aaKnown RBP19.08■□□□□ 0.64
HOXA9-201ENST00000343483 PRKAG3Q9UGI9 489 aa19.08■□□□□ 0.64
HOXA9-201ENST00000343483 ZNF189O75820 626 aaPredicted RBP19.07■□□□□ 0.64
HOXA9-201ENST00000343483 APOEP02649 317 aa19.07■□□□□ 0.64
HOXA9-201ENST00000343483 GALTP07902 379 aa19.07■□□□□ 0.64
HOXA9-201ENST00000343483 SESN2P58004 480 aaPredicted RBP19.07■□□□□ 0.64
HOXA9-201ENST00000343483 CRADDP78560 199 aa19.07■□□□□ 0.64
HOXA9-201ENST00000343483 SLC1A5Q15758 541 aa19.07■□□□□ 0.64
HOXA9-201ENST00000343483 RTP2Q5QGT7 225 aa19.07■□□□□ 0.64
HOXA9-201ENST00000343483 HHATQ5VTY9 493 aa19.07■□□□□ 0.64
HOXA9-201ENST00000343483 CRIPAKQ8N1N5 446 aa19.07■□□□□ 0.64
HOXA9-201ENST00000343483 SERPINB11Q96P15 392 aa19.07■□□□□ 0.64
HOXA9-201ENST00000343483 AGAP3Q96P47 875 aa19.07■□□□□ 0.64
HOXA9-201ENST00000343483 SEPT5Q99719 369 aaPredicted RBP19.07■□□□□ 0.64
HOXA9-201ENST00000343483 IGSF9Q9P2J2 1179 aa19.07■□□□□ 0.64
HOXA9-201ENST00000343483 GRID1Q9ULK0 1009 aa19.07■□□□□ 0.64
HOXA9-201ENST00000343483 NEU3Q9UQ49 428 aa19.07■□□□□ 0.64
HOXA9-201ENST00000343483 MRPL42Q9Y6G3 142 aaKnown RBP19.07■□□□□ 0.64
HOXA9-201ENST00000343483 IQANK1A0A1B0GTG1 560 aa19.07■□□□□ 0.64
HOXA9-201ENST00000343483 GOLGA8RI6L899 631 aa19.07■□□□□ 0.64
HOXA9-201ENST00000343483 UBOX5O94941 541 aa19.07■□□□□ 0.64
HOXA9-201ENST00000343483 DNAJC3Q13217 504 aa19.07■□□□□ 0.64
HOXA9-201ENST00000343483 PDK4Q16654 411 aa19.07■□□□□ 0.64
HOXA9-201ENST00000343483 MGAT5BQ3V5L5 792 aa19.07■□□□□ 0.64
HOXA9-201ENST00000343483 LRRC8BQ6P9F7 803 aa19.07■□□□□ 0.64
HOXA9-201ENST00000343483 RSPO2Q6UXX9 243 aaPredicted RBP19.07■□□□□ 0.64
HOXA9-201ENST00000343483 LRRC6Q86X45 466 aa19.07■□□□□ 0.64
HOXA9-201ENST00000343483 GSDMBQ8TAX9 411 aa19.07■□□□□ 0.64
HOXA9-201ENST00000343483 MZB1Q8WU39 189 aa19.07■□□□□ 0.64
HOXA9-201ENST00000343483 STAMBPL1Q96FJ0 436 aa19.07■□□□□ 0.64
HOXA9-201ENST00000343483 PAWRQ96IZ0 340 aaKnown RBP19.07■□□□□ 0.64
HOXA9-201ENST00000343483 KLC4Q9NSK0 619 aa19.07■□□□□ 0.64
HOXA9-201ENST00000343483 KLHL14Q9P2G3 628 aa19.07■□□□□ 0.64
HOXA9-201ENST00000343483 WDR27A2RRH5 827 aa19.06■□□□□ 0.64
HOXA9-201ENST00000343483 CXorf49A8MYA2 514 aaPredicted RBP19.06■□□□□ 0.64
HOXA9-201ENST00000343483 DFFAO00273 331 aa19.06■□□□□ 0.64
HOXA9-201ENST00000343483 TRDMT1O14717 391 aaKnown RBP19.06■□□□□ 0.64
HOXA9-201ENST00000343483 MTSS1O43312 755 aa19.06■□□□□ 0.64
HOXA9-201ENST00000343483 FAM155BO75949 473 aa19.06■□□□□ 0.64
HOXA9-201ENST00000343483 UPP2O95045 317 aa19.06■□□□□ 0.64
HOXA9-201ENST00000343483 ZWINTO95229 277 aa19.06■□□□□ 0.64
HOXA9-201ENST00000343483 MLNP12872 115 aa19.06■□□□□ 0.64
HOXA9-201ENST00000343483 FAAP100Q0VG06 881 aa19.06■□□□□ 0.64
HOXA9-201ENST00000343483 ELAVL2Q12926 359 aaKnown RBP19.06■□□□□ 0.64
HOXA9-201ENST00000343483 ZBTB17Q13105 803 aa19.06■□□□□ 0.64
HOXA9-201ENST00000343483 PPP2R5DQ14738 602 aa19.06■□□□□ 0.64
HOXA9-201ENST00000343483 RNF19BQ6ZMZ0 732 aa19.06■□□□□ 0.64
HOXA9-201ENST00000343483 RGS9BPQ6ZS82 235 aa19.06■□□□□ 0.64
HOXA9-201ENST00000343483 SLC26A11Q86WA9 606 aa19.06■□□□□ 0.64
HOXA9-201ENST00000343483 ARHGAP18Q8N392 663 aa19.06■□□□□ 0.64
HOXA9-201ENST00000343483 SPOCK2Q92563 424 aa19.06■□□□□ 0.64
HOXA9-201ENST00000343483 KLF6Q99612 283 aaPredicted RBP19.06■□□□□ 0.64
HOXA9-201ENST00000343483 MTMR11A4FU01 709 aa19.05■□□□□ 0.64
HOXA9-201ENST00000343483 SDR42E2A6NKP2 422 aa19.05■□□□□ 0.64
HOXA9-201ENST00000343483 ZBTB24O43167 697 aaPredicted RBP19.05■□□□□ 0.64
HOXA9-201ENST00000343483 C1QAP02745 245 aa19.05■□□□□ 0.64
HOXA9-201ENST00000343483 MT-ND3P03897 115 aa19.05■□□□□ 0.64
HOXA9-201ENST00000343483 GSTA2P09210 222 aa19.05■□□□□ 0.64
HOXA9-201ENST00000343483 PRKCHP24723 683 aa19.05■□□□□ 0.64
HOXA9-201ENST00000343483 TRMT10BQ6PF06 316 aaKnown RBP19.05■□□□□ 0.64
HOXA9-201ENST00000343483 LVRNQ6Q4G3 990 aa19.05■□□□□ 0.64
HOXA9-201ENST00000343483 TAS1R1Q7RTX1 841 aa19.05■□□□□ 0.64
HOXA9-201ENST00000343483 LRRC43Q8N309 656 aa19.05■□□□□ 0.64
HOXA9-201ENST00000343483 GBP7Q8N8V2 638 aaPredicted RBP19.05■□□□□ 0.64
HOXA9-201ENST00000343483 LRRC8CQ8TDW0 803 aa19.05■□□□□ 0.64
HOXA9-201ENST00000343483 BCL7CQ8WUZ0 217 aaPredicted RBP19.05■□□□□ 0.64
HOXA9-201ENST00000343483 FBXO32Q969P5 355 aa19.05■□□□□ 0.64
HOXA9-201ENST00000343483 TBC1D31Q96DN5 1066 aa19.05■□□□□ 0.64
HOXA9-201ENST00000343483 PCDHA11Q9Y5I1 949 aa19.05■□□□□ 0.64
HOXA9-201ENST00000343483 TET1Q8NFU7 2136 aa19.05■□□□□ 0.64
HOXA9-201ENST00000343483 MGAT1P26572 445 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms