RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 RBBP6Q7Z6E9 1792 aaKnown RBP15.21■□□□□ 0.03
CLCN1-201ENST00000343257 GOLGA8TH3BQL2 631 aa15.21■□□□□ 0.03
CLCN1-201ENST00000343257 M0QYV0 167 aa15.21■□□□□ 0.03
CLCN1-201ENST00000343257 ADAM23O75077 832 aa15.21■□□□□ 0.03
CLCN1-201ENST00000343257 GRK2P25098 689 aa15.21■□□□□ 0.03
CLCN1-201ENST00000343257 EPHX2P34913 555 aa15.21■□□□□ 0.03
CLCN1-201ENST00000343257 PHKA2P46019 1235 aa15.21■□□□□ 0.03
CLCN1-201ENST00000343257 YWHAEP62258 255 aaKnown RBP15.21■□□□□ 0.03
CLCN1-201ENST00000343257 TFDP2Q14188 446 aa15.21■□□□□ 0.03
CLCN1-201ENST00000343257 STILQ15468 1287 aa15.21■□□□□ 0.03
CLCN1-201ENST00000343257 TRNP1Q6NT89 227 aa15.21■□□□□ 0.03
CLCN1-201ENST00000343257 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.21■□□□□ 0.03
CLCN1-201ENST00000343257 COX4I2Q96KJ9 171 aa15.21■□□□□ 0.03
CLCN1-201ENST00000343257 SLC2A11Q9BYW1 496 aa15.21■□□□□ 0.03
CLCN1-201ENST00000343257 DHX33Q9H6R0 707 aaKnown RBP15.21■□□□□ 0.03
CLCN1-201ENST00000343257 DCDC2Q9UHG0 476 aa15.21■□□□□ 0.03
CLCN1-201ENST00000343257 CNTN6Q9UQ52 1028 aa15.21■□□□□ 0.03
CLCN1-201ENST00000343257 PRSS51A0A1B0GVH4 220 aa15.2■□□□□ 0.02
CLCN1-201ENST00000343257 FUOMA2VDF0 154 aa15.2■□□□□ 0.02
CLCN1-201ENST00000343257 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.2■□□□□ 0.02
CLCN1-201ENST00000343257 H3BNH8 94 aa15.2■□□□□ 0.02
CLCN1-201ENST00000343257 SERPINB7O75635 380 aa15.2■□□□□ 0.02
CLCN1-201ENST00000343257 TIPRLO75663 272 aa15.2■□□□□ 0.02
CLCN1-201ENST00000343257 VAPBO95292 243 aa15.2■□□□□ 0.02
CLCN1-201ENST00000343257 ACAT1P24752 427 aaKnown RBP15.2■□□□□ 0.02
CLCN1-201ENST00000343257 JAK3P52333 1124 aa15.2■□□□□ 0.02
CLCN1-201ENST00000343257 CLDN10P78369 228 aa15.2■□□□□ 0.02
CLCN1-201ENST00000343257 EN1Q05925 392 aaPredicted RBP15.2■□□□□ 0.02
CLCN1-201ENST00000343257 IKBKEQ14164 716 aa15.2■□□□□ 0.02
CLCN1-201ENST00000343257 PITRM1Q5JRX3 1037 aa15.2■□□□□ 0.02
CLCN1-201ENST00000343257 TMEM53Q6P2H8 277 aa15.2■□□□□ 0.02
CLCN1-201ENST00000343257 BORAQ6PGQ7 559 aa15.2■□□□□ 0.02
CLCN1-201ENST00000343257 GK5Q6ZS86 529 aa15.2■□□□□ 0.02
CLCN1-201ENST00000343257 LZTR1Q8N653 840 aa15.2■□□□□ 0.02
CLCN1-201ENST00000343257 PCDH19Q8TAB3 1148 aa15.2■□□□□ 0.02
CLCN1-201ENST00000343257 CLEC4DQ8WXI8 215 aa15.2■□□□□ 0.02
CLCN1-201ENST00000343257 AGAP3Q96P47 875 aa15.2■□□□□ 0.02
CLCN1-201ENST00000343257 APBA2Q99767 749 aa15.2■□□□□ 0.02
CLCN1-201ENST00000343257 CORO1BQ9BR76 489 aa15.2■□□□□ 0.02
CLCN1-201ENST00000343257 STN1Q9H668 368 aaKnown RBP15.2■□□□□ 0.02
CLCN1-201ENST00000343257 SLC38A7Q9NVC3 462 aa15.2■□□□□ 0.02
CLCN1-201ENST00000343257 WDR37Q9Y2I8 494 aa15.2■□□□□ 0.02
CLCN1-201ENST00000343257 AP4S1Q9Y587 144 aa15.2■□□□□ 0.02
CLCN1-201ENST00000343257 CDY2AQ9Y6F7 541 aa15.2■□□□□ 0.02
CLCN1-201ENST00000343257 CDY1Q9Y6F8 540 aa15.2■□□□□ 0.02
CLCN1-201ENST00000343257 NRAPQ86VF7 1730 aa15.2■□□□□ 0.02
CLCN1-201ENST00000343257 UGT1A6P19224 532 aa15.2■□□□□ 0.02
CLCN1-201ENST00000343257 MX2P20592 715 aa15.2■□□□□ 0.02
CLCN1-201ENST00000343257 HSD17B4P51659 736 aa15.2■□□□□ 0.02
CLCN1-201ENST00000343257 C21orf59P57076 290 aa15.2■□□□□ 0.02
CLCN1-201ENST00000343257 NUP107P57740 925 aa15.2■□□□□ 0.02
CLCN1-201ENST00000343257 ZFP1Q6P2D0 407 aa15.2■□□□□ 0.02
CLCN1-201ENST00000343257 GFM2Q969S9 779 aaKnown RBP15.2■□□□□ 0.02
CLCN1-201ENST00000343257 TWNKQ96RR1 684 aa15.2■□□□□ 0.02
CLCN1-201ENST00000343257 IDI2Q9BXS1 227 aa15.2■□□□□ 0.02
CLCN1-201ENST00000343257 ASNSD1Q9NWL6 643 aa15.2■□□□□ 0.02
CLCN1-201ENST00000343257 FAM149AA5PLN7 773 aa15.2■□□□□ 0.02
CLCN1-201ENST00000343257 TMEM247A6NEH6 219 aa15.2■□□□□ 0.02
CLCN1-201ENST00000343257 NRP1O14786 923 aa15.2■□□□□ 0.02
CLCN1-201ENST00000343257 FAM189A1O60320 539 aa15.2■□□□□ 0.02
CLCN1-201ENST00000343257 ESRRGP62508 458 aa15.2■□□□□ 0.02
CLCN1-201ENST00000343257 NME3Q13232 169 aa15.2■□□□□ 0.02
CLCN1-201ENST00000343257 PTK2BQ14289 1009 aa15.2■□□□□ 0.02
CLCN1-201ENST00000343257 TAZQ16635 292 aa15.2■□□□□ 0.02
CLCN1-201ENST00000343257 FGD3Q5JSP0 725 aa15.2■□□□□ 0.02
CLCN1-201ENST00000343257 PPP1R2P3Q6NXS1 205 aa15.2■□□□□ 0.02
CLCN1-201ENST00000343257 CENPSQ8N2Z9 138 aa15.2■□□□□ 0.02
CLCN1-201ENST00000343257 PPP1R10Q96QC0 940 aaKnown RBP15.2■□□□□ 0.02
CLCN1-201ENST00000343257 SNX15Q9NRS6 342 aa15.2■□□□□ 0.02
CLCN1-201ENST00000343257 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.2■□□□□ 0.02
CLCN1-201ENST00000343257 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.19■□□□□ 0.02
CLCN1-201ENST00000343257 KANSL1LA0AUZ9 987 aa15.19■□□□□ 0.02
CLCN1-201ENST00000343257 TMEM233B4DJY2 109 aa15.19■□□□□ 0.02
CLCN1-201ENST00000343257 USP12O75317 370 aa15.19■□□□□ 0.02
CLCN1-201ENST00000343257 DGAT1O75907 488 aa15.19■□□□□ 0.02
CLCN1-201ENST00000343257 UGT1A1P22309 533 aa15.19■□□□□ 0.02
CLCN1-201ENST00000343257 UGT1A4P22310 534 aa15.19■□□□□ 0.02
CLCN1-201ENST00000343257 UGT1A3P35503 534 aa15.19■□□□□ 0.02
CLCN1-201ENST00000343257 UGT1A5P35504 534 aa15.19■□□□□ 0.02
CLCN1-201ENST00000343257 EIF2B2P49770 351 aaKnown RBP15.19■□□□□ 0.02
CLCN1-201ENST00000343257 ATXN1P54253 815 aaKnown RBP15.19■□□□□ 0.02
CLCN1-201ENST00000343257 PFKPQ01813 784 aa15.19■□□□□ 0.02
CLCN1-201ENST00000343257 EMC2Q15006 297 aa15.19■□□□□ 0.02
CLCN1-201ENST00000343257 TMEM26Q6ZUK4 368 aa15.19■□□□□ 0.02
CLCN1-201ENST00000343257 CROCCP3Q8IVE0 287 aa15.19■□□□□ 0.02
CLCN1-201ENST00000343257 SP8Q8IXZ3 490 aa15.19■□□□□ 0.02
CLCN1-201ENST00000343257 LRRC43Q8N309 656 aa15.19■□□□□ 0.02
CLCN1-201ENST00000343257 FIBCD1Q8N539 461 aa15.19■□□□□ 0.02
CLCN1-201ENST00000343257 DCLK2Q8N568 766 aa15.19■□□□□ 0.02
CLCN1-201ENST00000343257 CDKL2Q92772 493 aa15.19■□□□□ 0.02
CLCN1-201ENST00000343257 DCPSQ96C86 337 aaKnown RBP15.19■□□□□ 0.02
CLCN1-201ENST00000343257 GATA5Q9BWX5 397 aaPredicted RBP15.19■□□□□ 0.02
CLCN1-201ENST00000343257 TRIM17Q9Y577 477 aa15.19■□□□□ 0.02
CLCN1-201ENST00000343257 KCNU1A8MYU2 1149 aa15.19■□□□□ 0.02
CLCN1-201ENST00000343257 MYL4P12829 197 aa15.19■□□□□ 0.02
CLCN1-201ENST00000343257 ZFXP17010 805 aaPredicted RBP15.19■□□□□ 0.02
CLCN1-201ENST00000343257 ALDH3B2P48448 385 aa15.19■□□□□ 0.02
CLCN1-201ENST00000343257 HSPA13P48723 471 aa15.19■□□□□ 0.02
CLCN1-201ENST00000343257 HARS2P49590 506 aaKnown RBP15.19■□□□□ 0.02
CLCN1-201ENST00000343257 TMED10P49755 219 aaKnown RBP15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms