RNA–Protein interactions for RNA: ENST00000341567.8

TMEM248-201, Transcript of transmembrane protein 248, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM248, Length 4,229 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-201ENST00000341567 SPATA6LQ8N4H0 392 aa13.8□□□□□ -0.2
TMEM248-201ENST00000341567 PCSK9Q8NBP7 692 aaKnown RBP13.8□□□□□ -0.2
TMEM248-201ENST00000341567 SLC4A11Q8NBS3 891 aa13.8□□□□□ -0.2
TMEM248-201ENST00000341567 PBXIP1Q96AQ6 731 aa13.8□□□□□ -0.2
TMEM248-201ENST00000341567 CATSPER2Q96P56 530 aa13.8□□□□□ -0.2
TMEM248-201ENST00000341567 ST6GALNAC4Q9H4F1 302 aa13.8□□□□□ -0.2
TMEM248-201ENST00000341567 ETAA1Q9NY74 926 aa13.8□□□□□ -0.2
TMEM248-201ENST00000341567 PLA2G4CQ9UP65 541 aa13.8□□□□□ -0.2
TMEM248-201ENST00000341567 RUVBL2Q9Y230 463 aaKnown RBP13.8□□□□□ -0.2
TMEM248-201ENST00000341567 SNX10Q9Y5X0 201 aa13.8□□□□□ -0.2
TMEM248-201ENST00000341567 MYH6P13533 1939 aa13.8□□□□□ -0.2
TMEM248-201ENST00000341567 A0A0G2JLL6 359 aaPredicted RBP13.8□□□□□ -0.2
TMEM248-201ENST00000341567 C5orf60A6NFR6 353 aa13.8□□□□□ -0.2
TMEM248-201ENST00000341567 H0Y626 953 aa13.8□□□□□ -0.2
TMEM248-201ENST00000341567 MSI1O43347 362 aaKnown RBP13.8□□□□□ -0.2
TMEM248-201ENST00000341567 B4GALT4O60513 344 aa13.8□□□□□ -0.2
TMEM248-201ENST00000341567 MPP3Q13368 585 aa13.8□□□□□ -0.2
TMEM248-201ENST00000341567 BLMHQ13867 455 aa13.8□□□□□ -0.2
TMEM248-201ENST00000341567 NRF1Q16656 503 aa13.8□□□□□ -0.2
TMEM248-201ENST00000341567 SLC44A4Q53GD3 710 aa13.8□□□□□ -0.2
TMEM248-201ENST00000341567 PLEKHA7Q6IQ23 1121 aa13.8□□□□□ -0.2
TMEM248-201ENST00000341567 RFWD3Q6PCD5 774 aa13.8□□□□□ -0.2
TMEM248-201ENST00000341567 TTC33Q6PID6 262 aaPredicted RBP13.8□□□□□ -0.2
TMEM248-201ENST00000341567 VSTM1Q6UX27 236 aa13.8□□□□□ -0.2
TMEM248-201ENST00000341567 BNC2Q6ZN30 1099 aaPredicted RBP13.8□□□□□ -0.2
TMEM248-201ENST00000341567 TSHZ1Q6ZSZ6 1077 aa13.8□□□□□ -0.2
TMEM248-201ENST00000341567 PRRT2Q7Z6L0 340 aaPredicted RBP13.8□□□□□ -0.2
TMEM248-201ENST00000341567 MFN1Q8IWA4 741 aa13.8□□□□□ -0.2
TMEM248-201ENST00000341567 EXOC2Q96KP1 924 aa13.8□□□□□ -0.2
TMEM248-201ENST00000341567 CDRT15Q96T59 188 aa13.8□□□□□ -0.2
TMEM248-201ENST00000341567 APOL5Q9BWW9 433 aa13.8□□□□□ -0.2
TMEM248-201ENST00000341567 NRDE2Q9H7Z3 1164 aa13.8□□□□□ -0.2
TMEM248-201ENST00000341567 COPS7BQ9H9Q2 264 aaPredicted RBP13.8□□□□□ -0.2
TMEM248-201ENST00000341567 POPDC2Q9HBU9 364 aa13.8□□□□□ -0.2
TMEM248-201ENST00000341567 ZNF212Q9UDV6 495 aa13.8□□□□□ -0.2
TMEM248-201ENST00000341567 TRPV2Q9Y5S1 764 aa13.8□□□□□ -0.2
TMEM248-201ENST00000341567 SHANK3Q9BYB0 1731 aa13.8□□□□□ -0.2
TMEM248-201ENST00000341567 H0YGN5 161 aa13.8□□□□□ -0.2
TMEM248-201ENST00000341567 SMAPO00193 183 aa13.8□□□□□ -0.2
TMEM248-201ENST00000341567 MDM4O15151 490 aa13.8□□□□□ -0.2
TMEM248-201ENST00000341567 GSC2O15499 205 aa13.8□□□□□ -0.2
TMEM248-201ENST00000341567 F9P00740 461 aa13.8□□□□□ -0.2
TMEM248-201ENST00000341567 ERCC2P18074 760 aa13.8□□□□□ -0.2
TMEM248-201ENST00000341567 PTPN7P35236 360 aa13.8□□□□□ -0.2
TMEM248-201ENST00000341567 WDR4P57081 412 aaKnown RBP13.8□□□□□ -0.2
TMEM248-201ENST00000341567 ANKRD22Q5VYY1 191 aa13.8□□□□□ -0.2
TMEM248-201ENST00000341567 RGMBQ6NW40 437 aa13.8□□□□□ -0.2
TMEM248-201ENST00000341567 CYP2R1Q6VVX0 501 aa13.8□□□□□ -0.2
TMEM248-201ENST00000341567 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.8□□□□□ -0.2
TMEM248-201ENST00000341567 ALLCQ8N6M5 410 aa13.8□□□□□ -0.2
TMEM248-201ENST00000341567 GPR63Q9BZJ6 419 aa13.8□□□□□ -0.2
TMEM248-201ENST00000341567 LRMDAQ9H2I8 198 aa13.8□□□□□ -0.2
TMEM248-201ENST00000341567 FAM105AQ9NUU6 356 aa13.8□□□□□ -0.2
TMEM248-201ENST00000341567 MPP6Q9NZW5 540 aa13.8□□□□□ -0.2
TMEM248-201ENST00000341567 PAIP2BQ9ULR5 123 aaKnown RBP13.8□□□□□ -0.2
TMEM248-201ENST00000341567 SNX5Q9Y5X3 404 aa13.8□□□□□ -0.2
TMEM248-201ENST00000341567 NFS1Q9Y697 457 aa13.8□□□□□ -0.2
TMEM248-201ENST00000341567 IRS2Q9Y4H2 1338 aa13.8□□□□□ -0.2
TMEM248-201ENST00000341567 TOGARAM1Q9Y4F4 1720 aa13.8□□□□□ -0.2
TMEM248-201ENST00000341567 LAMB4A4D0S4 1761 aa13.8□□□□□ -0.2
TMEM248-201ENST00000341567 PRR5-ARHGAP8B1AHC4 643 aa13.79□□□□□ -0.2
TMEM248-201ENST00000341567 E7ENQ6 273 aa13.79□□□□□ -0.2
TMEM248-201ENST00000341567 NELFEP18615 380 aaKnown RBP13.79□□□□□ -0.2
TMEM248-201ENST00000341567 GSCP56915 257 aaPredicted RBP13.79□□□□□ -0.2
TMEM248-201ENST00000341567 ARHGAP8P85298 464 aa13.79□□□□□ -0.2
TMEM248-201ENST00000341567 C9orf57Q5W0N0 161 aa13.79□□□□□ -0.2
TMEM248-201ENST00000341567 ANKRD52Q8NB46 1076 aa13.79□□□□□ -0.2
TMEM248-201ENST00000341567 GLIS1Q8NBF1 620 aa13.79□□□□□ -0.2
TMEM248-201ENST00000341567 UCMAQ8WVF2 138 aa13.79□□□□□ -0.2
TMEM248-201ENST00000341567 RNF208Q9H0X6 261 aa13.79□□□□□ -0.2
TMEM248-201ENST00000341567 LRRC40Q9H9A6 602 aa13.79□□□□□ -0.2
TMEM248-201ENST00000341567 DMAP1Q9NPF5 467 aaPredicted RBP13.79□□□□□ -0.2
TMEM248-201ENST00000341567 OLA1Q9NTK5 396 aaKnown RBP13.79□□□□□ -0.2
TMEM248-201ENST00000341567 CILPO75339 1184 aa13.79□□□□□ -0.2
TMEM248-201ENST00000341567 FGFR3P22607 806 aa13.79□□□□□ -0.2
TMEM248-201ENST00000341567 HDAC4P56524 1084 aa13.79□□□□□ -0.2
TMEM248-201ENST00000341567 MAPRE1Q15691 268 aaKnown RBP13.79□□□□□ -0.2
TMEM248-201ENST00000341567 TEDDM1Q5T9Z0 273 aa13.79□□□□□ -0.2
TMEM248-201ENST00000341567 BBS12Q6ZW61 710 aa13.79□□□□□ -0.2
TMEM248-201ENST00000341567 ILDR2Q71H61 639 aa13.79□□□□□ -0.2
TMEM248-201ENST00000341567 SNX32Q86XE0 403 aa13.79□□□□□ -0.2
TMEM248-201ENST00000341567 ZC3H15Q8WU90 426 aaKnown RBP13.79□□□□□ -0.2
TMEM248-201ENST00000341567 WNT8BQ93098 351 aa13.79□□□□□ -0.2
TMEM248-201ENST00000341567 EMID1Q96A84 441 aaPredicted RBP13.79□□□□□ -0.2
TMEM248-201ENST00000341567 SEMA6AQ9H2E6 1030 aa13.79□□□□□ -0.2
TMEM248-201ENST00000341567 ETNK2Q9NVF9 386 aa13.79□□□□□ -0.2
TMEM248-201ENST00000341567 SLC30A1Q9Y6M5 507 aa13.79□□□□□ -0.2
TMEM248-201ENST00000341567 WASF2Q9Y6W5 498 aa13.79□□□□□ -0.2
TMEM248-201ENST00000341567 NUP188Q5SRE5 1749 aa13.79□□□□□ -0.2
TMEM248-201ENST00000341567 F7P08709 466 aaPredicted RBP13.79□□□□□ -0.2
TMEM248-201ENST00000341567 ANPEPP15144 967 aa13.79□□□□□ -0.2
TMEM248-201ENST00000341567 ITGB6P18564 788 aa13.79□□□□□ -0.2
TMEM248-201ENST00000341567 ICAM3P32942 547 aa13.79□□□□□ -0.2
TMEM248-201ENST00000341567 PBX3P40426 434 aa13.79□□□□□ -0.2
TMEM248-201ENST00000341567 WNT7BP56706 349 aa13.79□□□□□ -0.2
TMEM248-201ENST00000341567 LPCAT4Q643R3 524 aa13.79□□□□□ -0.2
TMEM248-201ENST00000341567 SZRD1Q7Z422 152 aa13.79□□□□□ -0.2
TMEM248-201ENST00000341567 CACUL1Q86Y37 369 aa13.79□□□□□ -0.2
TMEM248-201ENST00000341567 XYLT1Q86Y38 959 aa13.79□□□□□ -0.2
TMEM248-201ENST00000341567 ATAD1Q8NBU5 361 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms