RNA–Protein interactions for RNA: ENST00000341398.6

NECTIN1-203, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-203ENST00000341398 DCAF6Q58WW2 860 aa13.51□□□□□ -0.25
NECTIN1-203ENST00000341398 SLC45A4Q5BKX6 768 aa13.51□□□□□ -0.25
NECTIN1-203ENST00000341398 PITRM1Q5JRX3 1037 aa13.51□□□□□ -0.25
NECTIN1-203ENST00000341398 SND1Q7KZF4 910 aaKnown RBP eCLIP13.51□□□□□ -0.253e-6■■□□□ 13.4
NECTIN1-203ENST00000341398 TMPRSS7Q7RTY8 843 aa13.51□□□□□ -0.25
NECTIN1-203ENST00000341398 ARHGEF19Q8IW93 802 aa13.51□□□□□ -0.25
NECTIN1-203ENST00000341398 TRIM59Q8IWR1 403 aa13.51□□□□□ -0.25
NECTIN1-203ENST00000341398 LGI2Q8N0V4 545 aa13.51□□□□□ -0.25
NECTIN1-203ENST00000341398 CFAP52Q8N1V2 620 aa13.51□□□□□ -0.25
NECTIN1-203ENST00000341398 OR2T34Q8NGX1 318 aa13.51□□□□□ -0.25
NECTIN1-203ENST00000341398 BAHD1Q8TBE0 780 aaPredicted RBP13.51□□□□□ -0.25
NECTIN1-203ENST00000341398 ZNF606Q8WXB4 792 aa13.51□□□□□ -0.25
NECTIN1-203ENST00000341398 LMLNQ96KR4 655 aa13.51□□□□□ -0.25
NECTIN1-203ENST00000341398 SRRTQ9BXP5 876 aaKnown RBP13.51□□□□□ -0.25
NECTIN1-203ENST00000341398 NUCKS1Q9H1E3 243 aaKnown RBP13.51□□□□□ -0.25
NECTIN1-203ENST00000341398 THAP9Q9H5L6 903 aa13.51□□□□□ -0.25
NECTIN1-203ENST00000341398 FZD4Q9ULV1 537 aa13.51□□□□□ -0.25
NECTIN1-203ENST00000341398 CNTN6Q9UQ52 1028 aa13.51□□□□□ -0.25
NECTIN1-203ENST00000341398 CTNND2Q9UQB3 1225 aa13.51□□□□□ -0.25
NECTIN1-203ENST00000341398 TP53BP1Q12888 1972 aaPredicted RBP13.5□□□□□ -0.25
NECTIN1-203ENST00000341398 KNTC1P50748 2209 aa13.5□□□□□ -0.25
NECTIN1-203ENST00000341398 A0A1W2PP55 124 aa13.5□□□□□ -0.25
NECTIN1-203ENST00000341398 F5H5T6 163 aa13.5□□□□□ -0.25
NECTIN1-203ENST00000341398 VILLO15195 856 aa13.5□□□□□ -0.25
NECTIN1-203ENST00000341398 MID1O15344 667 aa13.5□□□□□ -0.25
NECTIN1-203ENST00000341398 THAP12O43422 761 aa13.5□□□□□ -0.25
NECTIN1-203ENST00000341398 TRUB2O95900 331 aaKnown RBP13.5□□□□□ -0.25
NECTIN1-203ENST00000341398 ADH1BP00325 375 aa13.5□□□□□ -0.25
NECTIN1-203ENST00000341398 ATXN1LP0C7T5 689 aaKnown RBP13.5□□□□□ -0.25
NECTIN1-203ENST00000341398 ABCB4P21439 1286 aa13.5□□□□□ -0.25
NECTIN1-203ENST00000341398 SLC8A1P32418 973 aa13.5□□□□□ -0.25
NECTIN1-203ENST00000341398 CTSKP43235 329 aa13.5□□□□□ -0.25
NECTIN1-203ENST00000341398 MARSP56192 900 aaKnown RBP13.5□□□□□ -0.25
NECTIN1-203ENST00000341398 PAK1Q13153 545 aa13.5□□□□□ -0.25
NECTIN1-203ENST00000341398 MTA1Q13330 715 aa13.5□□□□□ -0.25
NECTIN1-203ENST00000341398 RABGAP1LQ5R372 815 aa13.5□□□□□ -0.25
NECTIN1-203ENST00000341398 C9orf64Q5T6V5 341 aa13.5□□□□□ -0.25
NECTIN1-203ENST00000341398 TTC39BQ5VTQ0 682 aaPredicted RBP13.5□□□□□ -0.25
NECTIN1-203ENST00000341398 TMEM110Q86TL2 294 aa13.5□□□□□ -0.25
NECTIN1-203ENST00000341398 CHSY1Q86X52 802 aa13.5□□□□□ -0.25
NECTIN1-203ENST00000341398 MMAAQ8IVH4 418 aaKnown RBP13.5□□□□□ -0.25
NECTIN1-203ENST00000341398 ADAM32Q8TC27 787 aa13.5□□□□□ -0.25
NECTIN1-203ENST00000341398 RNF34Q969K3 372 aa13.5□□□□□ -0.25
NECTIN1-203ENST00000341398 MYO19Q96H55 970 aa13.5□□□□□ -0.25
NECTIN1-203ENST00000341398 PRICKLE1Q96MT3 831 aaPredicted RBP13.5□□□□□ -0.25
NECTIN1-203ENST00000341398 SLC4A5Q9BY07 1137 aa13.5□□□□□ -0.25
NECTIN1-203ENST00000341398 INTS2Q9H0H0 1204 aaKnown RBP13.5□□□□□ -0.25
NECTIN1-203ENST00000341398 NEUROG2Q9H2A3 272 aa13.5□□□□□ -0.25
NECTIN1-203ENST00000341398 ADAMTS1Q9UHI8 967 aa13.5□□□□□ -0.25
NECTIN1-203ENST00000341398 INTS6Q9UL03 887 aaKnown RBP13.5□□□□□ -0.25
NECTIN1-203ENST00000341398 ADAMTS20P59510 1910 aa13.5□□□□□ -0.25
NECTIN1-203ENST00000341398 WDFY3Q8IZQ1 3526 aa13.49□□□□□ -0.25
NECTIN1-203ENST00000341398 TTC34A8MYJ7 566 aa13.49□□□□□ -0.25
NECTIN1-203ENST00000341398 KCNU1A8MYU2 1149 aa13.49□□□□□ -0.25
NECTIN1-203ENST00000341398 H0Y8X5 98 aa13.49□□□□□ -0.25
NECTIN1-203ENST00000341398 TAF4O00268 1085 aa13.49□□□□□ -0.25
NECTIN1-203ENST00000341398 KCNK3O14649 394 aa13.49□□□□□ -0.25
NECTIN1-203ENST00000341398 YKT6O15498 198 aa13.49□□□□□ -0.25
NECTIN1-203ENST00000341398 CALCAP01258 141 aa13.49□□□□□ -0.25
NECTIN1-203ENST00000341398 GOT1P17174 413 aa13.49□□□□□ -0.25
NECTIN1-203ENST00000341398 TACR2P21452 398 aa13.49□□□□□ -0.25
NECTIN1-203ENST00000341398 C5AR1P21730 350 aa13.49□□□□□ -0.25
NECTIN1-203ENST00000341398 CD38P28907 300 aa13.49□□□□□ -0.25
NECTIN1-203ENST00000341398 GNA15P30679 374 aa13.49□□□□□ -0.25
NECTIN1-203ENST00000341398 CCR5P51681 352 aa13.49□□□□□ -0.25
NECTIN1-203ENST00000341398 STX17P56962 302 aa13.49□□□□□ -0.25
NECTIN1-203ENST00000341398 CDK17Q00537 523 aa13.49□□□□□ -0.25
NECTIN1-203ENST00000341398 MORC3Q14149 939 aa13.49□□□□□ -0.25
NECTIN1-203ENST00000341398 ZC3H12AQ5D1E8 599 aaKnown RBP13.49□□□□□ -0.25
NECTIN1-203ENST00000341398 FSCBQ5H9T9 825 aa13.49□□□□□ -0.25
NECTIN1-203ENST00000341398 EFHC1Q5JVL4 640 aa13.49□□□□□ -0.25
NECTIN1-203ENST00000341398 SYPL2Q5VXT5 272 aa13.49□□□□□ -0.25
NECTIN1-203ENST00000341398 RAP1GAP2Q684P5 730 aa13.49□□□□□ -0.25
NECTIN1-203ENST00000341398 DENND1BQ6P3S1 775 aa13.49□□□□□ -0.25
NECTIN1-203ENST00000341398 NCEH1Q6PIU2 408 aa13.49□□□□□ -0.25
NECTIN1-203ENST00000341398 DSG4Q86SJ6 1040 aa13.49□□□□□ -0.25
NECTIN1-203ENST00000341398 TAC4Q86UU9 113 aa13.49□□□□□ -0.25
NECTIN1-203ENST00000341398 CREBRFQ8IUR6 639 aa13.49□□□□□ -0.25
NECTIN1-203ENST00000341398 COL26A1Q96A83 441 aa13.49□□□□□ -0.25
NECTIN1-203ENST00000341398 MRGPRX3Q96LB0 322 aa13.49□□□□□ -0.25
NECTIN1-203ENST00000341398 KREMEN1Q96MU8 473 aa13.49□□□□□ -0.25
NECTIN1-203ENST00000341398 NOX5Q96PH1 765 aa13.49□□□□□ -0.25
NECTIN1-203ENST00000341398 MTG2Q9H4K7 406 aa13.49□□□□□ -0.25
NECTIN1-203ENST00000341398 AASDHPPTQ9NRN7 309 aa13.49□□□□□ -0.25
NECTIN1-203ENST00000341398 FTSJ1Q9UET6 329 aa13.49□□□□□ -0.25
NECTIN1-203ENST00000341398 ITIH6Q6UXX5 1313 aa13.49□□□□□ -0.25
NECTIN1-203ENST00000341398 GCN1Q92616 2671 aaKnown RBP13.49□□□□□ -0.25
NECTIN1-203ENST00000341398 PLXNA2O75051 1894 aa13.49□□□□□ -0.25
NECTIN1-203ENST00000341398 TBC1D3DA0A087WVF3 549 aa13.48□□□□□ -0.25
NECTIN1-203ENST00000341398 TBC1D3IA0A087WXS9 549 aa13.48□□□□□ -0.25
NECTIN1-203ENST00000341398 TBC1D3EA0A087X179 549 aa13.48□□□□□ -0.25
NECTIN1-203ENST00000341398 TBC1D3KA0A087X1G2 549 aa13.48□□□□□ -0.25
NECTIN1-203ENST00000341398 TBC1D3FA6NER0 549 aaPredicted RBP13.48□□□□□ -0.25
NECTIN1-203ENST00000341398 TBC1D3LB9A6J9 549 aa13.48□□□□□ -0.25
NECTIN1-203ENST00000341398 E5RJQ4 531 aa13.48□□□□□ -0.25
NECTIN1-203ENST00000341398 BIN1O00499 593 aa13.48□□□□□ -0.25
NECTIN1-203ENST00000341398 PAPSS1O43252 624 aaPredicted RBP13.48□□□□□ -0.25
NECTIN1-203ENST00000341398 IL1BP01584 269 aa13.48□□□□□ -0.25
NECTIN1-203ENST00000341398 CAPNS1P04632 268 aa13.48□□□□□ -0.25
NECTIN1-203ENST00000341398 IGHV4-34P06331 123 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms