RNA–Protein interactions for RNA: ENST00000340840.6

TRERF1-201, Transcript of transcriptional regulating factor 1, humanhuman

TSL 5 BASIC

Gene TRERF1, Length 4,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-201ENST00000340840 NOGQ13253 232 aa9.65□□□□□ -0.86
TRERF1-201ENST00000340840 SEMA5AQ13591 1074 aa9.65□□□□□ -0.86
TRERF1-201ENST00000340840 PDE1CQ14123 709 aaPredicted RBP9.65□□□□□ -0.86
TRERF1-201ENST00000340840 RPS6KA2Q15349 733 aa9.65□□□□□ -0.86
TRERF1-201ENST00000340840 LY6KQ17RY6 165 aa9.65□□□□□ -0.86
TRERF1-201ENST00000340840 DCAF6Q58WW2 860 aa9.65□□□□□ -0.86
TRERF1-201ENST00000340840 VWA5B1Q5TIE3 1220 aa9.65□□□□□ -0.86
TRERF1-201ENST00000340840 LRRC8BQ6P9F7 803 aa9.65□□□□□ -0.86
TRERF1-201ENST00000340840 CATSPERGQ6ZRH7 1159 aa9.65□□□□□ -0.86
TRERF1-201ENST00000340840 CATSPER4Q7RTX7 472 aa9.65□□□□□ -0.86
TRERF1-201ENST00000340840 PBXIP1Q96AQ6 731 aa9.65□□□□□ -0.86
TRERF1-201ENST00000340840 WNK4Q96J92 1243 aa9.65□□□□□ -0.86
TRERF1-201ENST00000340840 COG4Q9H9E3 785 aa9.65□□□□□ -0.86
TRERF1-201ENST00000340840 PRDM16Q9HAZ2 1276 aa9.65□□□□□ -0.86
TRERF1-201ENST00000340840 ERAP1Q9NZ08 941 aa9.65□□□□□ -0.86
TRERF1-201ENST00000340840 VTI1BQ9UEU0 232 aa9.65□□□□□ -0.86
TRERF1-201ENST00000340840 TRPC5OSA6NMA1 111 aa9.65□□□□□ -0.87
TRERF1-201ENST00000340840 HDAC3O15379 428 aa9.65□□□□□ -0.87
TRERF1-201ENST00000340840 RNASEH1O60930 286 aaKnown RBP9.65□□□□□ -0.87
TRERF1-201ENST00000340840 HADHAP40939 763 aa9.65□□□□□ -0.87
TRERF1-201ENST00000340840 TPI1P60174 286 aa9.65□□□□□ -0.87
TRERF1-201ENST00000340840 PTK2BQ14289 1009 aa9.65□□□□□ -0.87
TRERF1-201ENST00000340840 MBLAC2Q68D91 279 aa9.65□□□□□ -0.87
TRERF1-201ENST00000340840 ZNF276Q8N554 614 aa9.65□□□□□ -0.87
TRERF1-201ENST00000340840 DCLK2Q8N568 766 aa9.65□□□□□ -0.87
TRERF1-201ENST00000340840 LZICQ8WZA0 190 aa9.65□□□□□ -0.87
TRERF1-201ENST00000340840 DCUN1D1Q96GG9 259 aa9.65□□□□□ -0.87
TRERF1-201ENST00000340840 TNIP3Q96KP6 325 aa9.65□□□□□ -0.87
TRERF1-201ENST00000340840 CATSPER2Q96P56 530 aa9.65□□□□□ -0.87
TRERF1-201ENST00000340840 WDR83Q9BRX9 315 aaKnown RBP9.65□□□□□ -0.87
TRERF1-201ENST00000340840 GRIP2Q9C0E4 1043 aa9.65□□□□□ -0.87
TRERF1-201ENST00000340840 MAF1Q9H063 256 aa9.65□□□□□ -0.87
TRERF1-201ENST00000340840 COPS7BQ9H9Q2 264 aaPredicted RBP9.65□□□□□ -0.87
TRERF1-201ENST00000340840 SPC25Q9HBM1 224 aa9.65□□□□□ -0.87
TRERF1-201ENST00000340840 PACSIN3Q9UKS6 424 aa9.65□□□□□ -0.87
TRERF1-201ENST00000340840 FZD1Q9UP38 647 aa9.65□□□□□ -0.87
TRERF1-201ENST00000340840 TELO2Q9Y4R8 837 aa9.65□□□□□ -0.87
TRERF1-201ENST00000340840 CSDE1O75534 798 aaKnown RBP9.64□□□□□ -0.87
TRERF1-201ENST00000340840 PIK3R1P27986 724 aa9.64□□□□□ -0.87
TRERF1-201ENST00000340840 PSMB4P28070 264 aa9.64□□□□□ -0.87
TRERF1-201ENST00000340840 SP2Q02086 613 aa9.64□□□□□ -0.87
TRERF1-201ENST00000340840 BST2Q10589 180 aaKnown RBP9.64□□□□□ -0.87
TRERF1-201ENST00000340840 STX5Q13190 355 aa9.64□□□□□ -0.87
TRERF1-201ENST00000340840 TEX44Q53QW1 395 aa9.64□□□□□ -0.87
TRERF1-201ENST00000340840 SFT2D3Q587I9 215 aa9.64□□□□□ -0.87
TRERF1-201ENST00000340840 FAM182AQ5T1J6 154 aa9.64□□□□□ -0.87
TRERF1-201ENST00000340840 RBM44Q6ZP01 1051 aaKnown RBP9.64□□□□□ -0.87
TRERF1-201ENST00000340840 MOB2Q70IA6 237 aa9.64□□□□□ -0.87
TRERF1-201ENST00000340840 CMC1Q7Z7K0 106 aa9.64□□□□□ -0.87
TRERF1-201ENST00000340840 NT5DC4Q86YG4 428 aa9.64□□□□□ -0.87
TRERF1-201ENST00000340840 RNF168Q8IYW5 571 aaPredicted RBP9.64□□□□□ -0.87
TRERF1-201ENST00000340840 TNS4Q8IZW8 715 aa9.64□□□□□ -0.87
TRERF1-201ENST00000340840 MPP5Q8N3R9 675 aa9.64□□□□□ -0.87
TRERF1-201ENST00000340840 C12orf29Q8N999 325 aa9.64□□□□□ -0.87
TRERF1-201ENST00000340840 RP9Q8TA86 221 aaKnown RBP9.64□□□□□ -0.87
TRERF1-201ENST00000340840 RNF217Q8TC41 542 aa9.64□□□□□ -0.87
TRERF1-201ENST00000340840 CNKSR2Q8WXI2 1034 aa9.64□□□□□ -0.87
TRERF1-201ENST00000340840 USP13Q92995 863 aaPredicted RBP9.64□□□□□ -0.87
TRERF1-201ENST00000340840 MRPS26Q9BYN8 205 aaKnown RBP9.64□□□□□ -0.87
TRERF1-201ENST00000340840 DRC3Q9H069 523 aa9.64□□□□□ -0.87
TRERF1-201ENST00000340840 TMEM216Q9P0N5 145 aa9.64□□□□□ -0.87
TRERF1-201ENST00000340840 STK39Q9UEW8 545 aa9.64□□□□□ -0.87
TRERF1-201ENST00000340840 HMGXB4Q9UGU5 601 aa9.64□□□□□ -0.87
TRERF1-201ENST00000340840 PCDHB12Q9Y5F1 795 aa9.64□□□□□ -0.87
TRERF1-201ENST00000340840 AP4B1Q9Y6B7 739 aa9.64□□□□□ -0.87
TRERF1-201ENST00000340840 A0A087WZ62 844 aa9.64□□□□□ -0.87
TRERF1-201ENST00000340840 HUS1O60921 280 aa9.64□□□□□ -0.87
TRERF1-201ENST00000340840 FAM200BP0CF97 657 aa9.64□□□□□ -0.87
TRERF1-201ENST00000340840 PKNOX1P55347 436 aa9.64□□□□□ -0.87
TRERF1-201ENST00000340840 CCDC142Q17RM4 750 aa9.64□□□□□ -0.87
TRERF1-201ENST00000340840 SLC9A4Q6AI14 798 aa9.64□□□□□ -0.87
TRERF1-201ENST00000340840 RNF148Q8N7C7 305 aa9.64□□□□□ -0.87
TRERF1-201ENST00000340840 ADCY4Q8NFM4 1077 aa9.64□□□□□ -0.87
TRERF1-201ENST00000340840 ZNF560Q96MR9 790 aa9.64□□□□□ -0.87
TRERF1-201ENST00000340840 CSPG4P5Q96PW8 444 aa9.64□□□□□ -0.87
TRERF1-201ENST00000340840 FDXACB1Q9BRP7 624 aaPredicted RBP9.64□□□□□ -0.87
TRERF1-201ENST00000340840 PTTG2Q9NZH5 202 aa9.64□□□□□ -0.87
TRERF1-201ENST00000340840 LZTS1Q9Y250 596 aa9.64□□□□□ -0.87
TRERF1-201ENST00000340840 GREB1LQ9C091 1923 aaPredicted RBP9.64□□□□□ -0.87
TRERF1-201ENST00000340840 TTLL13PA6NNM8 815 aa9.64□□□□□ -0.87
TRERF1-201ENST00000340840 DDHD2O94830 711 aa9.64□□□□□ -0.87
TRERF1-201ENST00000340840 PIGNO95427 931 aa9.64□□□□□ -0.87
TRERF1-201ENST00000340840 PABPC4LP0CB38 370 aaKnown RBP9.64□□□□□ -0.87
TRERF1-201ENST00000340840 PAMP19021 973 aa9.64□□□□□ -0.87
TRERF1-201ENST00000340840 RPL14P50914 215 aaKnown RBP9.64□□□□□ -0.87
TRERF1-201ENST00000340840 DLG1Q12959 904 aa9.64□□□□□ -0.87
TRERF1-201ENST00000340840 SNAPC2Q13487 334 aa9.64□□□□□ -0.87
TRERF1-201ENST00000340840 CA9Q16790 459 aa9.64□□□□□ -0.87
TRERF1-201ENST00000340840 PPM1JQ5JR12 505 aa9.64□□□□□ -0.87
TRERF1-201ENST00000340840 ADGRF2Q8IZF7 708 aa9.64□□□□□ -0.87
TRERF1-201ENST00000340840 PQLC3Q8N755 202 aa9.64□□□□□ -0.87
TRERF1-201ENST00000340840 PDCD6IPQ8WUM4 868 aaKnown RBP9.64□□□□□ -0.87
TRERF1-201ENST00000340840 RTP4Q96DX8 246 aa9.64□□□□□ -0.87
TRERF1-201ENST00000340840 CPB2Q96IY4 423 aa9.64□□□□□ -0.87
TRERF1-201ENST00000340840 LGMNQ99538 433 aa9.64□□□□□ -0.87
TRERF1-201ENST00000340840 TRIM15Q9C019 465 aa9.64□□□□□ -0.87
TRERF1-201ENST00000340840 WDR41Q9HAD4 459 aa9.64□□□□□ -0.87
TRERF1-201ENST00000340840 ANLNQ9NQW6 1124 aa9.64□□□□□ -0.87
TRERF1-201ENST00000340840 DDX18Q9NVP1 670 aaKnown RBP9.64□□□□□ -0.87
TRERF1-201ENST00000340840 RAP2CQ9Y3L5 183 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms