RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 SUSD3Q96L08 255 aa15.5■□□□□ 0.07
BRAT1-201ENST00000340611 SMC6Q96SB8 1091 aa15.5■□□□□ 0.07
BRAT1-201ENST00000340611 MARCH5Q9NX47 278 aa15.5■□□□□ 0.07
BRAT1-201ENST00000340611 LGALS13Q9UHV8 139 aa15.5■□□□□ 0.07
BRAT1-201ENST00000340611 DOLKQ9UPQ8 538 aa15.5■□□□□ 0.07
BRAT1-201ENST00000340611 SYNJ2BP-COX16A0A087WUM0 186 aa15.5■□□□□ 0.07
BRAT1-201ENST00000340611 SOAT2O75908 522 aa15.5■□□□□ 0.07
BRAT1-201ENST00000340611 GAS8O95995 478 aa15.5■□□□□ 0.07
BRAT1-201ENST00000340611 LMNAP02545 664 aaKnown RBP15.5■□□□□ 0.07
BRAT1-201ENST00000340611 IL1R2P27930 398 aa15.5■□□□□ 0.07
BRAT1-201ENST00000340611 HOXD11P31277 338 aaPredicted RBP15.5■□□□□ 0.07
BRAT1-201ENST00000340611 LHX1P48742 406 aa15.5■□□□□ 0.07
BRAT1-201ENST00000340611 PITX1P78337 314 aaPredicted RBP15.5■□□□□ 0.07
BRAT1-201ENST00000340611 YWHAHQ04917 246 aaPredicted RBP15.5■□□□□ 0.07
BRAT1-201ENST00000340611 PTK6Q13882 451 aa15.5■□□□□ 0.07
BRAT1-201ENST00000340611 HFE2Q6ZVN8 426 aa15.5■□□□□ 0.07
BRAT1-201ENST00000340611 TREML1Q86YW5 311 aa15.5■□□□□ 0.07
BRAT1-201ENST00000340611 RXFP2Q8WXD0 754 aa15.5■□□□□ 0.07
BRAT1-201ENST00000340611 MCRS1Q96EZ8 462 aa15.5■□□□□ 0.07
BRAT1-201ENST00000340611 MIPEPQ99797 713 aa15.5■□□□□ 0.07
BRAT1-201ENST00000340611 COX16Q9P0S2 106 aa15.5■□□□□ 0.07
BRAT1-201ENST00000340611 EXOC1LA0A1B0GW35 172 aa15.49■□□□□ 0.07
BRAT1-201ENST00000340611 DYTNA2CJ06 578 aa15.49■□□□□ 0.07
BRAT1-201ENST00000340611 M0QZQ0 153 aa15.49■□□□□ 0.07
BRAT1-201ENST00000340611 C2CD2LO14523 706 aa15.49■□□□□ 0.07
BRAT1-201ENST00000340611 PSMG1O95456 288 aa15.49■□□□□ 0.07
BRAT1-201ENST00000340611 AP1B1Q10567 949 aa15.49■□□□□ 0.07
BRAT1-201ENST00000340611 PKN2Q16513 984 aaKnown RBP15.49■□□□□ 0.07
BRAT1-201ENST00000340611 C6orf183Q5T699 404 aa15.49■□□□□ 0.07
BRAT1-201ENST00000340611 IZUMO3Q5VZ72 239 aa15.49■□□□□ 0.07
BRAT1-201ENST00000340611 HNRNPABQ99729 332 aaKnown RBP15.49■□□□□ 0.07
BRAT1-201ENST00000340611 CCDC77Q9BR77 488 aa15.49■□□□□ 0.07
BRAT1-201ENST00000340611 SLC4A5Q9BY07 1137 aa15.49■□□□□ 0.07
BRAT1-201ENST00000340611 DUSP16Q9BY84 665 aa15.49■□□□□ 0.07
BRAT1-201ENST00000340611 DCLK3Q9C098 648 aa15.49■□□□□ 0.07
BRAT1-201ENST00000340611 STRIP2Q9ULQ0 834 aa15.49■□□□□ 0.07
BRAT1-201ENST00000340611 STARD13Q9Y3M8 1113 aa15.49■□□□□ 0.07
BRAT1-201ENST00000340611 REV3LO60673 3130 aa15.49■□□□□ 0.07
BRAT1-201ENST00000340611 KRT10P13645 584 aa15.49■□□□□ 0.07
BRAT1-201ENST00000340611 PDGFRAP16234 1089 aa15.49■□□□□ 0.07
BRAT1-201ENST00000340611 NPR3P17342 541 aa15.49■□□□□ 0.07
BRAT1-201ENST00000340611 RPL17P18621 184 aaKnown RBP15.49■□□□□ 0.07
BRAT1-201ENST00000340611 KRT15P19012 456 aa15.49■□□□□ 0.07
BRAT1-201ENST00000340611 CYP2F1P24903 491 aa15.49■□□□□ 0.07
BRAT1-201ENST00000340611 GABRB2P47870 512 aa15.49■□□□□ 0.07
BRAT1-201ENST00000340611 SLC39A12Q504Y0 691 aa15.49■□□□□ 0.07
BRAT1-201ENST00000340611 SMUG1Q53HV7 270 aa15.49■□□□□ 0.07
BRAT1-201ENST00000340611 KAZNQ674X7 775 aa15.49■□□□□ 0.07
BRAT1-201ENST00000340611 C16orf87Q6PH81 154 aa15.49■□□□□ 0.07
BRAT1-201ENST00000340611 RSPO2Q6UXX9 243 aaPredicted RBP15.49■□□□□ 0.07
BRAT1-201ENST00000340611 METTL23Q86XA0 190 aa15.49■□□□□ 0.07
BRAT1-201ENST00000340611 MAML1Q92585 1016 aa15.49■□□□□ 0.07
BRAT1-201ENST00000340611 FAM149B1Q96BN6 582 aa15.49■□□□□ 0.07
BRAT1-201ENST00000340611 TTC1Q99614 292 aa15.49■□□□□ 0.07
BRAT1-201ENST00000340611 ADAM28Q9UKQ2 775 aa15.49■□□□□ 0.07
BRAT1-201ENST00000340611 WDR91A4D1P6 747 aa15.48■□□□□ 0.07
BRAT1-201ENST00000340611 INPPL1O15357 1258 aa15.48■□□□□ 0.07
BRAT1-201ENST00000340611 ALDH2P05091 517 aa15.48■□□□□ 0.07
BRAT1-201ENST00000340611 RPA3P35244 121 aaPredicted RBP15.48■□□□□ 0.07
BRAT1-201ENST00000340611 GPR15P49685 360 aa15.48■□□□□ 0.07
BRAT1-201ENST00000340611 ARFIP2P53365 341 aa15.48■□□□□ 0.07
BRAT1-201ENST00000340611 THOC5Q13769 683 aaKnown RBP15.48■□□□□ 0.07
BRAT1-201ENST00000340611 PRSS55Q6UWB4 352 aaPredicted RBP15.48■□□□□ 0.07
BRAT1-201ENST00000340611 TMEM86AQ8N2M4 240 aa15.48■□□□□ 0.07
BRAT1-201ENST00000340611 APBB2Q92870 758 aa15.48■□□□□ 0.07
BRAT1-201ENST00000340611 OLFM3Q96PB7 478 aa15.48■□□□□ 0.07
BRAT1-201ENST00000340611 RBM15Q96T37 977 aaKnown RBP eCLIP15.48■□□□□ 0.072e-10■■■■■ 28.6
BRAT1-201ENST00000340611 SEZ6LQ9BYH1 1024 aa15.48■□□□□ 0.07
BRAT1-201ENST00000340611 TRABDQ9H4I3 376 aa15.48■□□□□ 0.07
BRAT1-201ENST00000340611 IP6K2Q9UHH9 426 aa15.48■□□□□ 0.07
BRAT1-201ENST00000340611 NUMBLQ9Y6R0 609 aa15.48■□□□□ 0.07
BRAT1-201ENST00000340611 EYSQ5T1H1 3165 aa15.48■□□□□ 0.07
BRAT1-201ENST00000340611 LRCH4O75427 683 aa15.48■□□□□ 0.07
BRAT1-201ENST00000340611 PIAS1O75925 651 aa15.48■□□□□ 0.07
BRAT1-201ENST00000340611 PDE5AO76074 875 aa15.48■□□□□ 0.07
BRAT1-201ENST00000340611 TIMP1P01033 207 aa15.48■□□□□ 0.07
BRAT1-201ENST00000340611 GALTP07902 379 aa15.48■□□□□ 0.07
BRAT1-201ENST00000340611 PSMD7P51665 324 aa15.48■□□□□ 0.07
BRAT1-201ENST00000340611 SLC1A5Q15758 541 aa15.48■□□□□ 0.07
BRAT1-201ENST00000340611 RTP2Q5QGT7 225 aa15.48■□□□□ 0.07
BRAT1-201ENST00000340611 SPOUT1Q5T280 376 aaKnown RBP15.48■□□□□ 0.07
BRAT1-201ENST00000340611 C1orf53Q5VUE5 145 aa15.48■□□□□ 0.07
BRAT1-201ENST00000340611 SCAMP5Q8TAC9 235 aa15.48■□□□□ 0.07
BRAT1-201ENST00000340611 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.48■□□□□ 0.07
BRAT1-201ENST00000340611 SLCO2A1Q92959 643 aa15.48■□□□□ 0.07
BRAT1-201ENST00000340611 CADM1Q9BY67 442 aaKnown RBP15.48■□□□□ 0.07
BRAT1-201ENST00000340611 NPHS2Q9NP85 383 aa15.48■□□□□ 0.07
BRAT1-201ENST00000340611 SAYSD1Q9NPB0 183 aa15.48■□□□□ 0.07
BRAT1-201ENST00000340611 NGRNQ9NPE2 291 aaKnown RBP15.48■□□□□ 0.07
BRAT1-201ENST00000340611 GPATCH2LQ9NWQ4 482 aa15.48■□□□□ 0.07
BRAT1-201ENST00000340611 ABI2Q9NYB9 513 aaPredicted RBP15.48■□□□□ 0.07
BRAT1-201ENST00000340611 DCTN4Q9UJW0 460 aa15.48■□□□□ 0.07
BRAT1-201ENST00000340611 ZBBXA8MT70 800 aa15.47■□□□□ 0.07
BRAT1-201ENST00000340611 TCEA3O75764 348 aa15.47■□□□□ 0.07
BRAT1-201ENST00000340611 ATP5HO75947 161 aa15.47■□□□□ 0.07
BRAT1-201ENST00000340611 USP1O94782 785 aa15.47■□□□□ 0.07
BRAT1-201ENST00000340611 CD48P09326 243 aa15.47■□□□□ 0.07
BRAT1-201ENST00000340611 USP17L7P0C7H9 530 aa15.47■□□□□ 0.07
BRAT1-201ENST00000340611 RALAP11233 206 aa15.47■□□□□ 0.07
BRAT1-201ENST00000340611 CDK4P11802 303 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms