RNA–Protein interactions for RNA: ENST00000340019.4

TMC1-202, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TMC1, Length 3,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-202ENST00000340019 GDF10P55107 478 aa8.05□□□□□ -1.12
TMC1-202ENST00000340019 GALNT2Q10471 571 aa8.05□□□□□ -1.12
TMC1-202ENST00000340019 PTK6Q13882 451 aa8.05□□□□□ -1.12
TMC1-202ENST00000340019 DUPD1Q68J44 220 aa8.05□□□□□ -1.12
TMC1-202ENST00000340019 RFWD3Q6PCD5 774 aa8.05□□□□□ -1.12
TMC1-202ENST00000340019 ARHGAP12Q8IWW6 846 aa8.05□□□□□ -1.12
TMC1-202ENST00000340019 CCDC114Q96M63 670 aa8.05□□□□□ -1.12
TMC1-202ENST00000340019 HINFPQ9BQA5 517 aa8.05□□□□□ -1.12
TMC1-202ENST00000340019 TRIM51Q9BSJ1 452 aa8.05□□□□□ -1.12
TMC1-202ENST00000340019 S1PR5Q9H228 398 aa8.05□□□□□ -1.12
TMC1-202ENST00000340019 RETREG1Q9H6L5 497 aa8.05□□□□□ -1.12
TMC1-202ENST00000340019 C10orf88Q9H8K7 445 aa8.05□□□□□ -1.12
TMC1-202ENST00000340019 CFAP97Q9P2B7 532 aa8.05□□□□□ -1.12
TMC1-202ENST00000340019 DENND4AQ7Z401 1863 aa8.05□□□□□ -1.12
TMC1-202ENST00000340019 HACD1B0YJ81 288 aa8.05□□□□□ -1.12
TMC1-202ENST00000340019 NCAM2O15394 837 aa8.05□□□□□ -1.12
TMC1-202ENST00000340019 STIP1P31948 543 aaKnown RBP8.05□□□□□ -1.12
TMC1-202ENST00000340019 DRG2P55039 364 aaKnown RBP8.05□□□□□ -1.12
TMC1-202ENST00000340019 GUCY2DQ02846 1103 aa8.05□□□□□ -1.12
TMC1-202ENST00000340019 PRKD1Q15139 912 aaPredicted RBP8.05□□□□□ -1.12
TMC1-202ENST00000340019 TRADDQ15628 312 aa8.05□□□□□ -1.12
TMC1-202ENST00000340019 SLC45A4Q5BKX6 768 aa8.05□□□□□ -1.12
TMC1-202ENST00000340019 B4GALNT4Q76KP1 1039 aa8.05□□□□□ -1.12
TMC1-202ENST00000340019 LGI2Q8N0V4 545 aa8.05□□□□□ -1.12
TMC1-202ENST00000340019 UMODL1-AS1Q8N2C9 162 aa8.05□□□□□ -1.12
TMC1-202ENST00000340019 CCDC33Q8N5R6 958 aa8.05□□□□□ -1.12
TMC1-202ENST00000340019 LZTR1Q8N653 840 aa8.05□□□□□ -1.12
TMC1-202ENST00000340019 GLIS1Q8NBF1 620 aa8.05□□□□□ -1.12
TMC1-202ENST00000340019 NETO2Q8NC67 525 aa8.05□□□□□ -1.12
TMC1-202ENST00000340019 SH3RF2Q8TEC5 729 aa8.05□□□□□ -1.12
TMC1-202ENST00000340019 RTP4Q96DX8 246 aa8.05□□□□□ -1.12
TMC1-202ENST00000340019 RPRD1AQ96P16 312 aaPredicted RBP8.05□□□□□ -1.12
TMC1-202ENST00000340019 QKIQ96PU8 341 aaKnown RBP eCLIP8.05□□□□□ -1.12
TMC1-202ENST00000340019 DDX50Q9BQ39 737 aaKnown RBP8.05□□□□□ -1.12
TMC1-202ENST00000340019 ADAM7Q9H2U9 754 aa8.05□□□□□ -1.12
TMC1-202ENST00000340019 NOL6Q9H6R4 1146 aaKnown RBP8.05□□□□□ -1.12
TMC1-202ENST00000340019 EPB41L5Q9HCM4 733 aa8.05□□□□□ -1.12
TMC1-202ENST00000340019 TDP1Q9NUW8 608 aa8.05□□□□□ -1.12
TMC1-202ENST00000340019 CDH22Q9UJ99 828 aa8.05□□□□□ -1.12
TMC1-202ENST00000340019 ZNF510Q9Y2H8 683 aa8.05□□□□□ -1.12
TMC1-202ENST00000340019 UTP11Q9Y3A2 253 aaKnown RBP8.05□□□□□ -1.12
TMC1-202ENST00000340019 ZFP37Q9Y6Q3 630 aaPredicted RBP8.05□□□□□ -1.12
TMC1-202ENST00000340019 SHROOM3Q8TF72 1996 aa8.05□□□□□ -1.12
TMC1-202ENST00000340019 DOCK8Q8NF50 2099 aa8.05□□□□□ -1.12
TMC1-202ENST00000340019 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.04□□□□□ -1.12
TMC1-202ENST00000340019 TBX10O75333 385 aa8.04□□□□□ -1.12
TMC1-202ENST00000340019 PRAMEF12O95522 483 aa8.04□□□□□ -1.12
TMC1-202ENST00000340019 GAS8O95995 478 aa8.04□□□□□ -1.12
TMC1-202ENST00000340019 TUBBP07437 444 aa8.04□□□□□ -1.12
TMC1-202ENST00000340019 IVDP26440 423 aa8.04□□□□□ -1.12
TMC1-202ENST00000340019 RBL1P28749 1068 aa8.04□□□□□ -1.12
TMC1-202ENST00000340019 TNFRSF8P28908 595 aa8.04□□□□□ -1.12
TMC1-202ENST00000340019 SGSHP51688 502 aa8.04□□□□□ -1.12
TMC1-202ENST00000340019 VSNL1P62760 191 aa8.04□□□□□ -1.12
TMC1-202ENST00000340019 DLX2Q07687 328 aaPredicted RBP8.04□□□□□ -1.12
TMC1-202ENST00000340019 CBX2Q14781 532 aaPredicted RBP8.04□□□□□ -1.12
TMC1-202ENST00000340019 PDK1Q15118 436 aa8.04□□□□□ -1.12
TMC1-202ENST00000340019 ZNF77Q15935 545 aa8.04□□□□□ -1.12
TMC1-202ENST00000340019 DARS2Q6PI48 645 aaKnown RBP8.04□□□□□ -1.12
TMC1-202ENST00000340019 PRUNE1Q86TP1 453 aa8.04□□□□□ -1.12
TMC1-202ENST00000340019 DDX42Q86XP3 938 aaKnown RBP eCLIP8.04□□□□□ -1.12
TMC1-202ENST00000340019 NPAS3Q8IXF0 933 aa8.04□□□□□ -1.12
TMC1-202ENST00000340019 CFAP52Q8N1V2 620 aa8.04□□□□□ -1.12
TMC1-202ENST00000340019 CPXM2Q8N436 756 aa8.04□□□□□ -1.12
TMC1-202ENST00000340019 LRRN4Q8WUT4 740 aa8.04□□□□□ -1.12
TMC1-202ENST00000340019 TFB1MQ8WVM0 346 aaKnown RBP8.04□□□□□ -1.12
TMC1-202ENST00000340019 ING5Q8WYH8 240 aa8.04□□□□□ -1.12
TMC1-202ENST00000340019 HDAC11Q96DB2 347 aa8.04□□□□□ -1.12
TMC1-202ENST00000340019 P2RY11Q96G91 374 aa8.04□□□□□ -1.12
TMC1-202ENST00000340019 LGMNQ99538 433 aa8.04□□□□□ -1.12
TMC1-202ENST00000340019 RAB17Q9H0T7 212 aa8.04□□□□□ -1.12
TMC1-202ENST00000340019 DONSONQ9NYP3 566 aa8.04□□□□□ -1.12
TMC1-202ENST00000340019 LSM7Q9UK45 103 aaKnown RBP8.04□□□□□ -1.12
TMC1-202ENST00000340019 SH3BP1Q9Y3L3 701 aa8.04□□□□□ -1.12
TMC1-202ENST00000340019 E2F8A0AVK6 867 aa8.04□□□□□ -1.12
TMC1-202ENST00000340019 ESYT3A0FGR9 886 aa8.04□□□□□ -1.12
TMC1-202ENST00000340019 H7C0C1 242 aa8.04□□□□□ -1.12
TMC1-202ENST00000340019 SGK1O00141 431 aa8.04□□□□□ -1.12
TMC1-202ENST00000340019 SCAMP3O14828 347 aaKnown RBP8.04□□□□□ -1.12
TMC1-202ENST00000340019 PPP1R12AO14974 1030 aaPredicted RBP8.04□□□□□ -1.12
TMC1-202ENST00000340019 VAV1P15498 845 aa8.04□□□□□ -1.12
TMC1-202ENST00000340019 FSHRP23945 695 aa8.04□□□□□ -1.12
TMC1-202ENST00000340019 LTBRP36941 435 aa8.04□□□□□ -1.12
TMC1-202ENST00000340019 GARSP41250 739 aaKnown RBP8.04□□□□□ -1.12
TMC1-202ENST00000340019 ATP5OP48047 213 aa8.04□□□□□ -1.12
TMC1-202ENST00000340019 NDST2P52849 883 aa8.04□□□□□ -1.12
TMC1-202ENST00000340019 RPS24P62847 133 aaKnown RBP8.04□□□□□ -1.12
TMC1-202ENST00000340019 PPIDQ08752 370 aaKnown RBP8.04□□□□□ -1.12
TMC1-202ENST00000340019 USP4Q13107 963 aa8.04□□□□□ -1.12
TMC1-202ENST00000340019 PPP1R7Q15435 360 aa8.04□□□□□ -1.12
TMC1-202ENST00000340019 RABGAP1LQ5R372 815 aa8.04□□□□□ -1.12
TMC1-202ENST00000340019 TFAP2DQ7Z6R9 452 aa8.04□□□□□ -1.12
TMC1-202ENST00000340019 CIR1Q86X95 450 aaPredicted RBP8.04□□□□□ -1.12
TMC1-202ENST00000340019 CDKL3Q8IVW4 592 aaPredicted RBP8.04□□□□□ -1.12
TMC1-202ENST00000340019 ARID3BQ8IVW6 561 aaPredicted RBP8.04□□□□□ -1.12
TMC1-202ENST00000340019 BBS7Q8IWZ6 715 aa8.04□□□□□ -1.12
TMC1-202ENST00000340019 IFT20Q8IY31 132 aa8.04□□□□□ -1.12
TMC1-202ENST00000340019 FAM71DQ8N9W8 422 aa8.04□□□□□ -1.12
TMC1-202ENST00000340019 CASKIN2Q8WXE0 1202 aa8.04□□□□□ -1.12
TMC1-202ENST00000340019 CELF6Q96J87 481 aaKnown RBP8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms