RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 DEUP1Q05D60 604 aa16.74■□□□□ 0.27
LITAF-201ENST00000339430 TEX44Q53QW1 395 aa16.74■□□□□ 0.27
LITAF-201ENST00000339430 KIAA0319Q5VV43 1072 aa16.74■□□□□ 0.27
LITAF-201ENST00000339430 ANKRD33Q7Z3H0 272 aa16.74■□□□□ 0.27
LITAF-201ENST00000339430 MRPL10Q7Z7H8 261 aaKnown RBP16.74■□□□□ 0.27
LITAF-201ENST00000339430 RTN4RL1Q86UN2 441 aaPredicted RBP16.74■□□□□ 0.27
LITAF-201ENST00000339430 SIX6OS1Q8N1H7 587 aa16.74■□□□□ 0.27
LITAF-201ENST00000339430 AGAP3Q96P47 875 aa16.74■□□□□ 0.27
LITAF-201ENST00000339430 HNRNPABQ99729 332 aaKnown RBP16.74■□□□□ 0.27
LITAF-201ENST00000339430 TLE6Q9H808 572 aa16.74■□□□□ 0.27
LITAF-201ENST00000339430 SYBUQ9NX95 663 aa16.74■□□□□ 0.27
LITAF-201ENST00000339430 PSAT1Q9Y617 370 aa16.74■□□□□ 0.27
LITAF-201ENST00000339430 KIAA0100Q14667 2235 aaKnown RBP16.74■□□□□ 0.27
LITAF-201ENST00000339430 E2F8A0AVK6 867 aa16.73■□□□□ 0.27
LITAF-201ENST00000339430 ARL5CA6NH57 179 aa16.73■□□□□ 0.27
LITAF-201ENST00000339430 FAM72CH0Y354 149 aa16.73■□□□□ 0.27
LITAF-201ENST00000339430 NRP1O14786 923 aa16.73■□□□□ 0.27
LITAF-201ENST00000339430 BPGMP07738 259 aa16.73■□□□□ 0.27
LITAF-201ENST00000339430 F7P08709 466 aaPredicted RBP16.73■□□□□ 0.27
LITAF-201ENST00000339430 COL6A1P12109 1028 aa16.73■□□□□ 0.27
LITAF-201ENST00000339430 CALB2P22676 271 aa16.73■□□□□ 0.27
LITAF-201ENST00000339430 NOS2P35228 1153 aa16.73■□□□□ 0.27
LITAF-201ENST00000339430 GMPRP36959 345 aa16.73■□□□□ 0.27
LITAF-201ENST00000339430 SERPINB9P50453 376 aa16.73■□□□□ 0.27
LITAF-201ENST00000339430 OCRLQ01968 901 aa16.73■□□□□ 0.27
LITAF-201ENST00000339430 TLE2Q04725 743 aa16.73■□□□□ 0.27
LITAF-201ENST00000339430 FAM72AQ5TYM5 149 aa16.73■□□□□ 0.27
LITAF-201ENST00000339430 FAM72DQ6L9T8 149 aa16.73■□□□□ 0.27
LITAF-201ENST00000339430 DSTYKQ6XUX3 929 aa16.73■□□□□ 0.27
LITAF-201ENST00000339430 CLEC20AQ6ZU45 233 aa16.73■□□□□ 0.27
LITAF-201ENST00000339430 FAM72BQ86X60 149 aa16.73■□□□□ 0.27
LITAF-201ENST00000339430 TRIM42Q8IWZ5 723 aa16.73■□□□□ 0.27
LITAF-201ENST00000339430 ZNF567Q8N184 647 aa16.73■□□□□ 0.27
LITAF-201ENST00000339430 ARNTL2Q8WYA1 636 aa16.73■□□□□ 0.27
LITAF-201ENST00000339430 TSPAN18Q96SJ8 248 aa16.73■□□□□ 0.27
LITAF-201ENST00000339430 NPY6RQ99463 290 aa16.73■□□□□ 0.27
LITAF-201ENST00000339430 TIMM13Q9Y5L4 95 aaPredicted RBP16.73■□□□□ 0.27
LITAF-201ENST00000339430 SHROOM3Q8TF72 1996 aa16.73■□□□□ 0.27
LITAF-201ENST00000339430 EEF2KO00418 725 aaKnown RBP16.73■□□□□ 0.27
LITAF-201ENST00000339430 PITPNM1O00562 1244 aa16.73■□□□□ 0.27
LITAF-201ENST00000339430 TPP1O14773 563 aa16.73■□□□□ 0.27
LITAF-201ENST00000339430 GSC2O15499 205 aa16.73■□□□□ 0.27
LITAF-201ENST00000339430 STK10O94804 968 aaKnown RBP16.73■□□□□ 0.27
LITAF-201ENST00000339430 IL1BP01584 269 aa16.73■□□□□ 0.27
LITAF-201ENST00000339430 TPBGLP0DKB5 382 aa16.73■□□□□ 0.27
LITAF-201ENST00000339430 TKTL1P51854 596 aa16.73■□□□□ 0.27
LITAF-201ENST00000339430 AQP5P55064 265 aa16.73■□□□□ 0.27
LITAF-201ENST00000339430 WASHC5Q12768 1159 aa16.73■□□□□ 0.27
LITAF-201ENST00000339430 GPNMBQ14956 572 aa16.73■□□□□ 0.27
LITAF-201ENST00000339430 LRRC8BQ6P9F7 803 aa16.73■□□□□ 0.27
LITAF-201ENST00000339430 BZW1Q7L1Q6 419 aaKnown RBP16.73■□□□□ 0.27
LITAF-201ENST00000339430 SLC7A14Q8TBB6 771 aa16.73■□□□□ 0.27
LITAF-201ENST00000339430 C7orf26Q96N11 449 aa16.73■□□□□ 0.27
LITAF-201ENST00000339430 PPP1R10Q96QC0 940 aaKnown RBP16.73■□□□□ 0.27
LITAF-201ENST00000339430 ANLNQ9NQW6 1124 aa16.73■□□□□ 0.27
LITAF-201ENST00000339430 MKS1Q9NXB0 559 aa16.73■□□□□ 0.27
LITAF-201ENST00000339430 MIOSQ9NXC5 875 aa16.73■□□□□ 0.27
LITAF-201ENST00000339430 PPARGC1AQ9UBK2 798 aaKnown RBP16.73■□□□□ 0.27
LITAF-201ENST00000339430 MAGED2Q9UNF1 606 aaPredicted RBP16.73■□□□□ 0.27
LITAF-201ENST00000339430 GIT1Q9Y2X7 761 aa16.73■□□□□ 0.27
LITAF-201ENST00000339430 NUP205Q92621 2012 aa16.72■□□□□ 0.27
LITAF-201ENST00000339430 MKI67P46013 3256 aaKnown RBP16.72■□□□□ 0.27
LITAF-201ENST00000339430 HNRNPCL1O60812 293 aaKnown RBP16.72■□□□□ 0.27
LITAF-201ENST00000339430 USP12O75317 370 aa16.72■□□□□ 0.27
LITAF-201ENST00000339430 AMHP03971 560 aa16.72■□□□□ 0.27
LITAF-201ENST00000339430 ALDOAP04075 364 aaKnown RBP16.72■□□□□ 0.27
LITAF-201ENST00000339430 WARSP23381 471 aaKnown RBP16.72■□□□□ 0.27
LITAF-201ENST00000339430 CRYMQ14894 314 aa16.72■□□□□ 0.27
LITAF-201ENST00000339430 STEAP4Q687X5 459 aa16.72■□□□□ 0.27
LITAF-201ENST00000339430 PACS1Q6VY07 963 aa16.72■□□□□ 0.27
LITAF-201ENST00000339430 PID1Q7Z2X4 250 aa16.72■□□□□ 0.27
LITAF-201ENST00000339430 LIMS2Q7Z4I7 341 aa16.72■□□□□ 0.27
LITAF-201ENST00000339430 CRLF3Q8IUI8 442 aa16.72■□□□□ 0.27
LITAF-201ENST00000339430 PPP1R14CQ8TAE6 165 aa16.72■□□□□ 0.27
LITAF-201ENST00000339430 HIPK3Q9H422 1215 aa16.72■□□□□ 0.27
LITAF-201ENST00000339430 RGS18Q9NS28 235 aa16.72■□□□□ 0.27
LITAF-201ENST00000339430 KRT82Q9NSB4 513 aa16.72■□□□□ 0.27
LITAF-201ENST00000339430 CAPN9O14815 690 aa16.72■□□□□ 0.27
LITAF-201ENST00000339430 OPHN1O60890 802 aa16.72■□□□□ 0.27
LITAF-201ENST00000339430 ENO1P06733 434 aaKnown RBP16.72■□□□□ 0.27
LITAF-201ENST00000339430 ERVK-10P10266 1014 aa16.72■□□□□ 0.27
LITAF-201ENST00000339430 GNAZP19086 355 aa16.72■□□□□ 0.27
LITAF-201ENST00000339430 SCNN1GP51170 649 aa16.72■□□□□ 0.27
LITAF-201ENST00000339430 RPL10AP62906 217 aaKnown RBP16.72■□□□□ 0.27
LITAF-201ENST00000339430 NIPAL4Q0D2K0 466 aa16.72■□□□□ 0.27
LITAF-201ENST00000339430 NAA25Q14CX7 972 aa16.72■□□□□ 0.27
LITAF-201ENST00000339430 KHDC1Q4VXA5 237 aaKnown RBP16.72■□□□□ 0.27
LITAF-201ENST00000339430 FASTKD1Q53R41 847 aaKnown RBP16.72■□□□□ 0.27
LITAF-201ENST00000339430 WASHC2DQ5SRD0 308 aa16.72■□□□□ 0.27
LITAF-201ENST00000339430 C4orf50Q6ZRC1 276 aa16.72■□□□□ 0.27
LITAF-201ENST00000339430 RFX8Q6ZV50 586 aa16.72■□□□□ 0.27
LITAF-201ENST00000339430 MARK2Q7KZI7 788 aaKnown RBP16.72■□□□□ 0.27
LITAF-201ENST00000339430 TOP6BLQ8N6T0 577 aa16.72■□□□□ 0.27
LITAF-201ENST00000339430 LINC01599Q8WXQ3 324 aa16.72■□□□□ 0.27
LITAF-201ENST00000339430 APBB2Q92870 758 aa16.72■□□□□ 0.27
LITAF-201ENST00000339430 MCUR1Q96AQ8 359 aa16.72■□□□□ 0.27
LITAF-201ENST00000339430 SCLYQ96I15 445 aa16.72■□□□□ 0.27
LITAF-201ENST00000339430 PAWRQ96IZ0 340 aaKnown RBP16.72■□□□□ 0.27
LITAF-201ENST00000339430 PPP1R12CQ9BZL4 782 aa16.72■□□□□ 0.27
LITAF-201ENST00000339430 ULBP1Q9BZM6 244 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms