RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 KRT15P19012 456 aa23.01■■□□□ 1.27
PDLIM2-203ENST00000339162 RFC2P35250 354 aa23.01■■□□□ 1.27
PDLIM2-203ENST00000339162 TDRPQ86YL5 185 aa23.01■■□□□ 1.27
PDLIM2-203ENST00000339162 ARHGAP12Q8IWW6 846 aa23.01■■□□□ 1.27
PDLIM2-203ENST00000339162 RIBC1Q8N443 379 aaPredicted RBP23.01■■□□□ 1.27
PDLIM2-203ENST00000339162 ANKRD42Q8N9B4 389 aa23.01■■□□□ 1.27
PDLIM2-203ENST00000339162 TMEM169Q96HH4 297 aa23.01■■□□□ 1.27
PDLIM2-203ENST00000339162 ZNF558Q96NG5 402 aa23.01■■□□□ 1.27
PDLIM2-203ENST00000339162 GORASP1Q9BQQ3 440 aa23.01■■□□□ 1.27
PDLIM2-203ENST00000339162 INTS9Q9NV88 658 aaKnown RBP23.01■■□□□ 1.27
PDLIM2-203ENST00000339162 CPP00450 1065 aa23■■□□□ 1.27
PDLIM2-203ENST00000339162 JCHAINP01591 159 aa23■■□□□ 1.27
PDLIM2-203ENST00000339162 DNAJB2P25686 324 aa23■■□□□ 1.27
PDLIM2-203ENST00000339162 CD68P34810 354 aaPredicted RBP23■■□□□ 1.27
PDLIM2-203ENST00000339162 SESN2P58004 480 aaPredicted RBP23■■□□□ 1.27
PDLIM2-203ENST00000339162 OXCT2Q9BYC2 517 aaPredicted RBP23■■□□□ 1.27
PDLIM2-203ENST00000339162 SLC39A8Q9C0K1 460 aa23■■□□□ 1.27
PDLIM2-203ENST00000339162 CATSPERBQ9H7T0 1116 aa23■■□□□ 1.27
PDLIM2-203ENST00000339162 PSMC3IPQ9P2W1 217 aaPredicted RBP23■■□□□ 1.27
PDLIM2-203ENST00000339162 BACE2Q9Y5Z0 518 aa23■■□□□ 1.27
PDLIM2-203ENST00000339162 TLR5O60602 858 aa23■■□□□ 1.27
PDLIM2-203ENST00000339162 USP12O75317 370 aa23■■□□□ 1.27
PDLIM2-203ENST00000339162 SOD2P04179 222 aa23■■□□□ 1.27
PDLIM2-203ENST00000339162 HOXC13P31276 330 aa23■■□□□ 1.27
PDLIM2-203ENST00000339162 IFNAR2P48551 515 aa23■■□□□ 1.27
PDLIM2-203ENST00000339162 MS4A13Q5J8X5 152 aa23■■□□□ 1.27
PDLIM2-203ENST00000339162 TFAP2DQ7Z6R9 452 aa23■■□□□ 1.27
PDLIM2-203ENST00000339162 SLC39A11Q8N1S5 342 aa23■■□□□ 1.27
PDLIM2-203ENST00000339162 ATXN2LQ8WWM7 1075 aaKnown RBP23■■□□□ 1.27
PDLIM2-203ENST00000339162 RC3H2Q9HBD1 1191 aaKnown RBP23■■□□□ 1.27
PDLIM2-203ENST00000339162 IGSF9Q9P2J2 1179 aa23■■□□□ 1.27
PDLIM2-203ENST00000339162 SLC24A2Q9UI40 661 aa23■■□□□ 1.27
PDLIM2-203ENST00000339162 GREB1Q4ZG55 1949 aa22.99■■□□□ 1.27
PDLIM2-203ENST00000339162 A0A1W2PPM1 405 aa22.99■■□□□ 1.27
PDLIM2-203ENST00000339162 APOEP02649 317 aa22.99■■□□□ 1.27
PDLIM2-203ENST00000339162 PSEN1P49768 467 aa22.99■■□□□ 1.27
PDLIM2-203ENST00000339162 KLHL38Q2WGJ6 581 aa22.99■■□□□ 1.27
PDLIM2-203ENST00000339162 TRABD2AQ86V40 505 aa22.99■■□□□ 1.27
PDLIM2-203ENST00000339162 ANKLE1Q8NAG6 615 aa22.99■■□□□ 1.27
PDLIM2-203ENST00000339162 CYTH2Q99418 400 aa22.99■■□□□ 1.27
PDLIM2-203ENST00000339162 PRMT1Q99873 361 aaKnown RBP22.99■■□□□ 1.27
PDLIM2-203ENST00000339162 XAB2Q9HCS7 855 aaKnown RBP22.99■■□□□ 1.27
PDLIM2-203ENST00000339162 RSPH14Q9UHP6 348 aa22.99■■□□□ 1.27
PDLIM2-203ENST00000339162 FGF10O15520 208 aaPredicted RBP22.98■■□□□ 1.27
PDLIM2-203ENST00000339162 SPAG7O75391 227 aa22.98■■□□□ 1.27
PDLIM2-203ENST00000339162 SLC2A3P11169 496 aa22.98■■□□□ 1.27
PDLIM2-203ENST00000339162 MSH2P43246 934 aa22.98■■□□□ 1.27
PDLIM2-203ENST00000339162 LBX1P52954 281 aa22.98■■□□□ 1.27
PDLIM2-203ENST00000339162 TEX44Q53QW1 395 aa22.98■■□□□ 1.27
PDLIM2-203ENST00000339162 CASC4Q6P4E1 433 aa22.98■■□□□ 1.27
PDLIM2-203ENST00000339162 UNC5AQ6ZN44 842 aa22.98■■□□□ 1.27
PDLIM2-203ENST00000339162 C4orf33Q8N1A6 199 aa22.98■■□□□ 1.27
PDLIM2-203ENST00000339162 CYP4F11Q9HBI6 524 aa22.98■■□□□ 1.27
PDLIM2-203ENST00000339162 UBP1Q9NZI7 540 aa22.98■■□□□ 1.27
PDLIM2-203ENST00000339162 TTLL3Q9Y4R7 772 aa22.98■■□□□ 1.27
PDLIM2-203ENST00000339162 NDUFAB1O14561 156 aa22.98■■□□□ 1.27
PDLIM2-203ENST00000339162 NFKB1P19838 968 aa22.98■■□□□ 1.27
PDLIM2-203ENST00000339162 SARNPP82979 210 aaKnown RBP22.98■■□□□ 1.27
PDLIM2-203ENST00000339162 TRIP4Q15650 581 aaPredicted RBP22.98■■□□□ 1.27
PDLIM2-203ENST00000339162 RAP1GAP2Q684P5 730 aa22.98■■□□□ 1.27
PDLIM2-203ENST00000339162 ATPAF2Q8N5M1 289 aa22.98■■□□□ 1.27
PDLIM2-203ENST00000339162 ZSCAN18Q8TBC5 510 aaPredicted RBP22.98■■□□□ 1.27
PDLIM2-203ENST00000339162 DCAKDQ8WVC6 231 aa22.98■■□□□ 1.27
PDLIM2-203ENST00000339162 ZNF512Q96ME7 567 aaPredicted RBP22.98■■□□□ 1.27
PDLIM2-203ENST00000339162 EBNA1BP2Q99848 306 aaKnown RBP22.98■■□□□ 1.27
PDLIM2-203ENST00000339162 BRD8Q9H0E9 1235 aa22.98■■□□□ 1.27
PDLIM2-203ENST00000339162 CNTN5O94779 1100 aa22.97■■□□□ 1.27
PDLIM2-203ENST00000339162 ZDHHC11BP0C7U3 371 aa22.97■■□□□ 1.27
PDLIM2-203ENST00000339162 HSPA8P11142 646 aaKnown RBP22.97■■□□□ 1.27
PDLIM2-203ENST00000339162 TSHRP16473 764 aa22.97■■□□□ 1.27
PDLIM2-203ENST00000339162 MGAT1P26572 445 aa22.97■■□□□ 1.27
PDLIM2-203ENST00000339162 TUFMP49411 452 aaKnown RBP22.97■■□□□ 1.27
PDLIM2-203ENST00000339162 ALFQ53S48 1182 aa22.97■■□□□ 1.27
PDLIM2-203ENST00000339162 NLRP14Q86W24 1093 aa22.97■■□□□ 1.27
PDLIM2-203ENST00000339162 ZNF461Q8TAF7 563 aa22.97■■□□□ 1.27
PDLIM2-203ENST00000339162 DPF3Q92784 378 aa22.97■■□□□ 1.27
PDLIM2-203ENST00000339162 ZNF419Q96HQ0 510 aaPredicted RBP22.97■■□□□ 1.27
PDLIM2-203ENST00000339162 C1orf74Q96LT6 269 aa22.97■■□□□ 1.27
PDLIM2-203ENST00000339162 OLA1Q9NTK5 396 aaKnown RBP22.97■■□□□ 1.27
PDLIM2-203ENST00000339162 CXorf49A8MYA2 514 aaPredicted RBP22.97■■□□□ 1.27
PDLIM2-203ENST00000339162 FAM155BO75949 473 aa22.97■■□□□ 1.27
PDLIM2-203ENST00000339162 NUMBP49757 651 aa22.97■■□□□ 1.27
PDLIM2-203ENST00000339162 KCNQ1P51787 676 aa22.97■■□□□ 1.27
PDLIM2-203ENST00000339162 TRMT10BQ6PF06 316 aaKnown RBP22.97■■□□□ 1.27
PDLIM2-203ENST00000339162 ADGRD1Q6QNK2 874 aa22.97■■□□□ 1.27
PDLIM2-203ENST00000339162 NECAB2Q7Z6G3 386 aa22.97■■□□□ 1.27
PDLIM2-203ENST00000339162 CTAGE3PQ8IX95 158 aa22.97■■□□□ 1.27
PDLIM2-203ENST00000339162 CNTD1Q8N815 330 aa22.97■■□□□ 1.27
PDLIM2-203ENST00000339162 RTL3Q8N8U3 475 aaKnown RBP22.97■■□□□ 1.27
PDLIM2-203ENST00000339162 CCT8L2Q96SF2 557 aa22.97■■□□□ 1.27
PDLIM2-203ENST00000339162 DHRS4Q9BTZ2 278 aa22.97■■□□□ 1.27
PDLIM2-203ENST00000339162 TRABDQ9H4I3 376 aa22.97■■□□□ 1.27
PDLIM2-203ENST00000339162 AFF4Q9UHB7 1163 aaKnown RBP22.97■■□□□ 1.27
PDLIM2-203ENST00000339162 GOLGA6L7A0A1B0GV03 622 aa22.96■■□□□ 1.27
PDLIM2-203ENST00000339162 GMNCA6NCL1 334 aa22.96■■□□□ 1.27
PDLIM2-203ENST00000339162 C1QAP02745 245 aa22.96■■□□□ 1.27
PDLIM2-203ENST00000339162 CCT5P48643 541 aa22.96■■□□□ 1.27
PDLIM2-203ENST00000339162 HNRNPH2P55795 449 aaKnown RBP22.96■■□□□ 1.27
PDLIM2-203ENST00000339162 CDK16Q00536 496 aa22.96■■□□□ 1.27
PDLIM2-203ENST00000339162 DSG1Q02413 1049 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms