RNA–Protein interactions for RNA: ENST00000338635.10

XRCC4-202, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS P4 TSL 2 BASIC

Gene XRCC4, Length 1,579 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-202ENST00000338635 LIASO43766 372 aa2.8□□□□□ -1.96
XRCC4-202ENST00000338635 NEURL1O76050 574 aa2.8□□□□□ -1.96
XRCC4-202ENST00000338635 LCKP06239 509 aa2.8□□□□□ -1.96
XRCC4-202ENST00000338635 RBM39Q14498 530 aaKnown RBP2.8□□□□□ -1.96
XRCC4-202ENST00000338635 CRTC1Q6UUV9 634 aa2.8□□□□□ -1.96
XRCC4-202ENST00000338635 C16orf89Q6UX73 402 aa2.8□□□□□ -1.96
XRCC4-202ENST00000338635 CAMK1DQ8IU85 385 aa2.8□□□□□ -1.96
XRCC4-202ENST00000338635 FAM217AQ8IXS0 508 aa2.8□□□□□ -1.96
XRCC4-202ENST00000338635 TMED6Q8WW62 240 aa2.8□□□□□ -1.96
XRCC4-202ENST00000338635 STRBPQ96SI9 672 aaKnown RBP2.8□□□□□ -1.96
XRCC4-202ENST00000338635 CDH19Q9H159 772 aa2.8□□□□□ -1.96
XRCC4-202ENST00000338635 C1orf112Q9NSG2 853 aa2.8□□□□□ -1.96
XRCC4-202ENST00000338635 TYW1Q9NV66 732 aaKnown RBP2.8□□□□□ -1.96
XRCC4-202ENST00000338635 MMP24Q9Y5R2 645 aa2.8□□□□□ -1.96
XRCC4-202ENST00000338635 LMTK3Q96Q04 1460 aa2.8□□□□□ -1.96
XRCC4-202ENST00000338635 ERI2A8K979 691 aaKnown RBP2.79□□□□□ -1.96
XRCC4-202ENST00000338635 MS4A18H0YCH9 400 aa2.79□□□□□ -1.96
XRCC4-202ENST00000338635 GOLIM4O00461 696 aa2.79□□□□□ -1.96
XRCC4-202ENST00000338635 VWA5AO00534 786 aa2.79□□□□□ -1.96
XRCC4-202ENST00000338635 MGEA5O60502 916 aa2.79□□□□□ -1.96
XRCC4-202ENST00000338635 F7P08709 466 aaPredicted RBP2.79□□□□□ -1.96
XRCC4-202ENST00000338635 PDGFRBP09619 1106 aa2.79□□□□□ -1.96
XRCC4-202ENST00000338635 ITGB8P26012 769 aa2.79□□□□□ -1.96
XRCC4-202ENST00000338635 SLC16A2P36021 539 aa2.79□□□□□ -1.96
XRCC4-202ENST00000338635 TAF6P49848 677 aa2.79□□□□□ -1.96
XRCC4-202ENST00000338635 CBFBQ13951 182 aa2.79□□□□□ -1.96
XRCC4-202ENST00000338635 GALNT3Q14435 633 aa2.79□□□□□ -1.96
XRCC4-202ENST00000338635 ALG10Q5BKT4 473 aa2.79□□□□□ -1.96
XRCC4-202ENST00000338635 ALG10BQ5I7T1 473 aa2.79□□□□□ -1.96
XRCC4-202ENST00000338635 C10orf76Q5T2E6 689 aa2.79□□□□□ -1.96
XRCC4-202ENST00000338635 C8orf82Q6P1X6 216 aaPredicted RBP2.79□□□□□ -1.96
XRCC4-202ENST00000338635 DARS2Q6PI48 645 aaKnown RBP2.79□□□□□ -1.96
XRCC4-202ENST00000338635 Q6ZSV7 163 aa2.79□□□□□ -1.96
XRCC4-202ENST00000338635 SLC25A41Q8N5S1 370 aa2.79□□□□□ -1.96
XRCC4-202ENST00000338635 RFLNBQ8N5W9 214 aa2.79□□□□□ -1.96
XRCC4-202ENST00000338635 EXD3Q8N9H8 876 aa2.79□□□□□ -1.96
XRCC4-202ENST00000338635 IGSF21Q96ID5 467 aa2.79□□□□□ -1.96
XRCC4-202ENST00000338635 BRINP2Q9C0B6 783 aa2.79□□□□□ -1.96
XRCC4-202ENST00000338635 PNRC2Q9NPJ4 139 aaKnown RBP2.79□□□□□ -1.96
XRCC4-202ENST00000338635 TNFSF13BQ9Y275 285 aa2.79□□□□□ -1.96
XRCC4-202ENST00000338635 THRAP3Q9Y2W1 955 aaKnown RBP2.79□□□□□ -1.96
XRCC4-202ENST00000338635 BMPR1BO00238 502 aa2.78□□□□□ -1.96
XRCC4-202ENST00000338635 MSI1O43347 362 aaKnown RBP2.78□□□□□ -1.96
XRCC4-202ENST00000338635 THAP12O43422 761 aa2.78□□□□□ -1.96
XRCC4-202ENST00000338635 CHRNB2P17787 502 aa2.78□□□□□ -1.96
XRCC4-202ENST00000338635 SHC2P98077 582 aa2.78□□□□□ -1.96
XRCC4-202ENST00000338635 GRSF1Q12849 480 aaKnown RBP eCLIP2.78□□□□□ -1.96
XRCC4-202ENST00000338635 DUSP6Q16828 381 aa2.78□□□□□ -1.96
XRCC4-202ENST00000338635 KIAA0753Q2KHM9 967 aa2.78□□□□□ -1.96
XRCC4-202ENST00000338635 CCDC149Q6ZUS6 474 aa2.78□□□□□ -1.96
XRCC4-202ENST00000338635 KRT27Q7Z3Y8 459 aa2.78□□□□□ -1.96
XRCC4-202ENST00000338635 FJX1Q86VR8 437 aa2.78□□□□□ -1.96
XRCC4-202ENST00000338635 KDM1BQ8NB78 822 aa2.78□□□□□ -1.96
XRCC4-202ENST00000338635 FAM156AQ8NDB6 213 aa2.78□□□□□ -1.96
XRCC4-202ENST00000338635 OR14A16Q8NHC5 309 aa2.78□□□□□ -1.96
XRCC4-202ENST00000338635 TAF15Q92804 592 aaKnown RBP eCLIP2.78□□□□□ -1.96
XRCC4-202ENST00000338635 FIZ1Q96SL8 496 aa2.78□□□□□ -1.96
XRCC4-202ENST00000338635 PKP4Q99569 1192 aa2.78□□□□□ -1.96
XRCC4-202ENST00000338635 ZIM2Q9NZV7 527 aa2.78□□□□□ -1.96
XRCC4-202ENST00000338635 IGSF9Q9P2J2 1179 aa2.78□□□□□ -1.96
XRCC4-202ENST00000338635 hCG_2014768A0A024R1R8 64 aa2.78□□□□□ -1.96
XRCC4-202ENST00000338635 LOC105371045A0A1W2PR82 267 aa2.78□□□□□ -1.96
XRCC4-202ENST00000338635 AREL1O15033 823 aa2.78□□□□□ -1.96
XRCC4-202ENST00000338635 SLC5A2P31639 672 aa2.78□□□□□ -1.96
XRCC4-202ENST00000338635 ACSM2AQ08AH3 577 aa2.78□□□□□ -1.96
XRCC4-202ENST00000338635 NSUN2Q08J23 767 aaKnown RBP eCLIP2.78□□□□□ -1.96
XRCC4-202ENST00000338635 TRAF3Q13114 568 aa2.78□□□□□ -1.96
XRCC4-202ENST00000338635 ATP1A4Q13733 1029 aa2.78□□□□□ -1.96
XRCC4-202ENST00000338635 HLFQ16534 295 aa2.78□□□□□ -1.96
XRCC4-202ENST00000338635 MINDY4Q4G0A6 757 aa2.78□□□□□ -1.96
XRCC4-202ENST00000338635 ARHGAP29Q52LW3 1261 aa2.78□□□□□ -1.96
XRCC4-202ENST00000338635 MRNIPQ6NTE8 343 aa2.78□□□□□ -1.96
XRCC4-202ENST00000338635 ADAM5Q6NVV9 412 aa2.78□□□□□ -1.96
XRCC4-202ENST00000338635 TCP11L2Q8N4U5 519 aa2.78□□□□□ -1.96
XRCC4-202ENST00000338635 IP6K1Q92551 441 aa2.78□□□□□ -1.96
XRCC4-202ENST00000338635 GRAMD1AQ96CP6 724 aa2.78□□□□□ -1.96
XRCC4-202ENST00000338635 LRRC46Q96FV0 321 aa2.78□□□□□ -1.96
XRCC4-202ENST00000338635 ADAD1Q96M93 576 aaKnown RBP2.78□□□□□ -1.96
XRCC4-202ENST00000338635 B3GNT4Q9C0J1 378 aa2.78□□□□□ -1.96
XRCC4-202ENST00000338635 SFXN1Q9H9B4 322 aa2.78□□□□□ -1.96
XRCC4-202ENST00000338635 TXNRD2Q9NNW7 524 aa2.78□□□□□ -1.96
XRCC4-202ENST00000338635 RNF146Q9NTX7 359 aa2.78□□□□□ -1.96
XRCC4-202ENST00000338635 FBXO28Q9NVF7 368 aa2.78□□□□□ -1.96
XRCC4-202ENST00000338635 OCIAD1Q9NX40 245 aa2.78□□□□□ -1.96
XRCC4-202ENST00000338635 DONSONQ9NYP3 566 aa2.78□□□□□ -1.96
XRCC4-202ENST00000338635 PCDHB7Q9Y5E2 793 aa2.78□□□□□ -1.96
XRCC4-202ENST00000338635 U2AF1L5P0DN76 240 aaPredicted RBP2.77□□□□□ -1.97
XRCC4-202ENST00000338635 IBSPP21815 317 aaPredicted RBP2.77□□□□□ -1.97
XRCC4-202ENST00000338635 MST1P26927 711 aa2.77□□□□□ -1.97
XRCC4-202ENST00000338635 TNFSF8P32971 234 aa2.77□□□□□ -1.97
XRCC4-202ENST00000338635 TUBA1BP68363 451 aa2.77□□□□□ -1.97
XRCC4-202ENST00000338635 U2AF1Q01081 240 aaKnown RBP eCLIP2.77□□□□□ -1.97
XRCC4-202ENST00000338635 CXorf57Q6NSI4 855 aaKnown RBP2.77□□□□□ -1.97
XRCC4-202ENST00000338635 WDR93Q6P2C0 686 aa2.77□□□□□ -1.97
XRCC4-202ENST00000338635 CCDC28AQ8IWP9 274 aa2.77□□□□□ -1.97
XRCC4-202ENST00000338635 ADGRF3Q8IZF5 1079 aa2.77□□□□□ -1.97
XRCC4-202ENST00000338635 ADPRHL1Q8NDY3 354 aa2.77□□□□□ -1.97
XRCC4-202ENST00000338635 FAM216AQ8WUB2 273 aa2.77□□□□□ -1.97
XRCC4-202ENST00000338635 NPIPB3Q92617 1050 aa2.77□□□□□ -1.97
XRCC4-202ENST00000338635 IQCDQ96DY2 449 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms