RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 CDH18Q13634 790 aa13.81□□□□□ -0.2
NUDCD3-201ENST00000338427 HLA-BQ31612 363 aa13.81□□□□□ -0.2
NUDCD3-201ENST00000338427 HNRNPA1L2Q32P51 320 aaKnown RBP13.81□□□□□ -0.2
NUDCD3-201ENST00000338427 TAF3Q5VWG9 929 aa13.81□□□□□ -0.2
NUDCD3-201ENST00000338427 C11orf57Q6ZUT1 292 aaPredicted RBP13.81□□□□□ -0.2
NUDCD3-201ENST00000338427 FAM71AQ8IYT1 594 aa13.81□□□□□ -0.2
NUDCD3-201ENST00000338427 CCAR2Q8N163 923 aaKnown RBP13.81□□□□□ -0.2
NUDCD3-201ENST00000338427 STK40Q8N2I9 435 aa13.81□□□□□ -0.2
NUDCD3-201ENST00000338427 ATP6V0D2Q8N8Y2 350 aa13.81□□□□□ -0.2
NUDCD3-201ENST00000338427 PTPRN2Q92932 1015 aa13.81□□□□□ -0.2
NUDCD3-201ENST00000338427 BTN2A3PQ96KV6 586 aa13.81□□□□□ -0.2
NUDCD3-201ENST00000338427 ORAI3Q9BRQ5 295 aa13.81□□□□□ -0.2
NUDCD3-201ENST00000338427 BTBD1Q9H0C5 482 aa13.81□□□□□ -0.2
NUDCD3-201ENST00000338427 SIK2Q9H0K1 926 aa13.81□□□□□ -0.2
NUDCD3-201ENST00000338427 RSPH9Q9H1X1 276 aaPredicted RBP13.81□□□□□ -0.2
NUDCD3-201ENST00000338427 GAREM1Q9H706 876 aa13.81□□□□□ -0.2
NUDCD3-201ENST00000338427 LMBRD1Q9NUN5 540 aa13.81□□□□□ -0.2
NUDCD3-201ENST00000338427 FBXL12Q9NXK8 326 aa13.81□□□□□ -0.2
NUDCD3-201ENST00000338427 SUSD2Q9UGT4 822 aa13.81□□□□□ -0.2
NUDCD3-201ENST00000338427 KLK13Q9UKR3 277 aa13.81□□□□□ -0.2
NUDCD3-201ENST00000338427 FHOD1Q9Y613 1164 aa13.81□□□□□ -0.2
NUDCD3-201ENST00000338427 AKAP13Q12802 2813 aa13.81□□□□□ -0.2
NUDCD3-201ENST00000338427 MUC22E2RYF6 1773 aaPredicted RBP13.81□□□□□ -0.2
NUDCD3-201ENST00000338427 A0A1W2PP55 124 aa13.8□□□□□ -0.2
NUDCD3-201ENST00000338427 UPK3BL1B0FP48 263 aa13.8□□□□□ -0.2
NUDCD3-201ENST00000338427 UPK3BL2E5RIL1 263 aa13.8□□□□□ -0.2
NUDCD3-201ENST00000338427 PES1O00541 588 aaKnown RBP13.8□□□□□ -0.2
NUDCD3-201ENST00000338427 WNT9AO14904 365 aa13.8□□□□□ -0.2
NUDCD3-201ENST00000338427 CNTN5O94779 1100 aa13.8□□□□□ -0.2
NUDCD3-201ENST00000338427 ADCY5O95622 1261 aa13.8□□□□□ -0.2
NUDCD3-201ENST00000338427 SEMA4FO95754 770 aa13.8□□□□□ -0.2
NUDCD3-201ENST00000338427 SLC8A1P32418 973 aa13.8□□□□□ -0.2
NUDCD3-201ENST00000338427 KLK7P49862 253 aa13.8□□□□□ -0.2
NUDCD3-201ENST00000338427 GALCP54803 685 aa13.8□□□□□ -0.2
NUDCD3-201ENST00000338427 ECT2LQ008S8 904 aa13.8□□□□□ -0.2
NUDCD3-201ENST00000338427 AUHQ13825 339 aaKnown RBP13.8□□□□□ -0.2
NUDCD3-201ENST00000338427 RAPGEF1Q13905 1077 aa13.8□□□□□ -0.2
NUDCD3-201ENST00000338427 E2F5Q15329 346 aa13.8□□□□□ -0.2
NUDCD3-201ENST00000338427 TRIP6Q15654 476 aaKnown RBP13.8□□□□□ -0.2
NUDCD3-201ENST00000338427 MEA1Q16626 185 aa13.8□□□□□ -0.2
NUDCD3-201ENST00000338427 KIF19Q2TAC6 998 aa13.8□□□□□ -0.2
NUDCD3-201ENST00000338427 EFHC1Q5JVL4 640 aa13.8□□□□□ -0.2
NUDCD3-201ENST00000338427 KLHDC7AQ5VTJ3 777 aa13.8□□□□□ -0.2
NUDCD3-201ENST00000338427 OTUD1Q5VV17 481 aaPredicted RBP13.8□□□□□ -0.2
NUDCD3-201ENST00000338427 ZNF776Q68DI1 518 aaPredicted RBP13.8□□□□□ -0.2
NUDCD3-201ENST00000338427 OLFML1Q6UWY5 402 aa13.8□□□□□ -0.2
NUDCD3-201ENST00000338427 RABEPKQ7Z6M1 372 aa13.8□□□□□ -0.2
NUDCD3-201ENST00000338427 PHLDB2Q86SQ0 1253 aa13.8□□□□□ -0.2
NUDCD3-201ENST00000338427 SLCO6A1Q86UG4 719 aa13.8□□□□□ -0.2
NUDCD3-201ENST00000338427 TMEM121BQ9BXQ6 578 aaPredicted RBP13.8□□□□□ -0.2
NUDCD3-201ENST00000338427 IRX2Q9BZI1 471 aaPredicted RBP13.8□□□□□ -0.2
NUDCD3-201ENST00000338427 PABPC3Q9H361 631 aaKnown RBP13.8□□□□□ -0.2
NUDCD3-201ENST00000338427 TM9SF3Q9HD45 589 aa13.8□□□□□ -0.2
NUDCD3-201ENST00000338427 TAB2Q9NYJ8 693 aa13.8□□□□□ -0.2
NUDCD3-201ENST00000338427 SLC12A6Q9UHW9 1150 aa13.8□□□□□ -0.2
NUDCD3-201ENST00000338427 VANGL2Q9ULK5 521 aa13.8□□□□□ -0.2
NUDCD3-201ENST00000338427 FNDC3AQ9Y2H6 1198 aaKnown RBP13.8□□□□□ -0.2
NUDCD3-201ENST00000338427 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.8□□□□□ -0.2
NUDCD3-201ENST00000338427 CEP83Q9Y592 693 aa13.8□□□□□ -0.2
NUDCD3-201ENST00000338427 SNX11Q9Y5W9 270 aa13.8□□□□□ -0.2
NUDCD3-201ENST00000338427 HS3ST4Q9Y661 456 aa13.8□□□□□ -0.2
NUDCD3-201ENST00000338427 KMT2BQ9UMN6 2715 aaPredicted RBP13.8□□□□□ -0.2
NUDCD3-201ENST00000338427 TYW5A2RUC4 315 aaKnown RBP13.79□□□□□ -0.2
NUDCD3-201ENST00000338427 F5H5T6 163 aa13.79□□□□□ -0.2
NUDCD3-201ENST00000338427 M0QYT0 321 aa13.79□□□□□ -0.2
NUDCD3-201ENST00000338427 PAGE1O75459 146 aa13.79□□□□□ -0.2
NUDCD3-201ENST00000338427 ASLP04424 464 aa13.79□□□□□ -0.2
NUDCD3-201ENST00000338427 IGHV4-34P06331 123 aa13.79□□□□□ -0.2
NUDCD3-201ENST00000338427 PROS1P07225 676 aa13.79□□□□□ -0.2
NUDCD3-201ENST00000338427 C7P10643 843 aa13.79□□□□□ -0.2
NUDCD3-201ENST00000338427 KCNJ12Q14500 433 aa13.79□□□□□ -0.2
NUDCD3-201ENST00000338427 CST6Q15828 149 aa13.79□□□□□ -0.2
NUDCD3-201ENST00000338427 RAB6CQ53S08 254 aa13.79□□□□□ -0.2
NUDCD3-201ENST00000338427 CXorf57Q6NSI4 855 aaKnown RBP13.79□□□□□ -0.2
NUDCD3-201ENST00000338427 CCDC117Q8IWD4 279 aaPredicted RBP13.79□□□□□ -0.2
NUDCD3-201ENST00000338427 AADATQ8N5Z0 425 aa13.79□□□□□ -0.2
NUDCD3-201ENST00000338427 SETD7Q8WTS6 366 aaKnown RBP13.79□□□□□ -0.2
NUDCD3-201ENST00000338427 ALG14Q96F25 216 aa13.79□□□□□ -0.2
NUDCD3-201ENST00000338427 FAM81BQ96LP2 452 aa13.79□□□□□ -0.2
NUDCD3-201ENST00000338427 NAA15Q9BXJ9 866 aaKnown RBP13.79□□□□□ -0.2
NUDCD3-201ENST00000338427 RAB6CQ9H0N0 254 aa13.79□□□□□ -0.2
NUDCD3-201ENST00000338427 NUP62CLQ9H1M0 184 aa13.79□□□□□ -0.2
NUDCD3-201ENST00000338427 VPS16Q9H269 839 aa13.79□□□□□ -0.2
NUDCD3-201ENST00000338427 PIGVQ9NUD9 493 aa13.79□□□□□ -0.2
NUDCD3-201ENST00000338427 BTBD3Q9Y2F9 522 aa13.79□□□□□ -0.2
NUDCD3-201ENST00000338427 SPEGQ15772 3267 aa13.79□□□□□ -0.2
NUDCD3-201ENST00000338427 HSF2BPO75031 334 aa13.78□□□□□ -0.2
NUDCD3-201ENST00000338427 RNASEH2AO75792 299 aaKnown RBP13.78□□□□□ -0.2
NUDCD3-201ENST00000338427 GLI1P08151 1106 aa13.78□□□□□ -0.2
NUDCD3-201ENST00000338427 SRPRAP08240 638 aaKnown RBP13.78□□□□□ -0.2
NUDCD3-201ENST00000338427 CYP11B1P15538 503 aa13.78□□□□□ -0.2
NUDCD3-201ENST00000338427 ABCB4P21439 1286 aa13.78□□□□□ -0.2
NUDCD3-201ENST00000338427 ERCC5P28715 1186 aaPredicted RBP13.78□□□□□ -0.2
NUDCD3-201ENST00000338427 CCR1P32246 355 aa13.78□□□□□ -0.2
NUDCD3-201ENST00000338427 NOS2P35228 1153 aa13.78□□□□□ -0.2
NUDCD3-201ENST00000338427 PSMD8P48556 350 aa13.78□□□□□ -0.2
NUDCD3-201ENST00000338427 POM121L1PQ3SYA9 428 aa13.78□□□□□ -0.2
NUDCD3-201ENST00000338427 ALFQ53S48 1182 aa13.78□□□□□ -0.2
NUDCD3-201ENST00000338427 TRNP1Q6NT89 227 aa13.78□□□□□ -0.2
NUDCD3-201ENST00000338427 NCEH1Q6PIU2 408 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms