RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 WFDC5Q8TCV5 224 aa11.03□□□□□ -0.64
CAPN3-202ENST00000337571 RHBDD1Q8TEB9 315 aa11.03□□□□□ -0.64
CAPN3-202ENST00000337571 BIRC7Q96CA5 298 aa11.03□□□□□ -0.64
CAPN3-202ENST00000337571 SLC39A13Q96H72 371 aa11.03□□□□□ -0.64
CAPN3-202ENST00000337571 CDC6Q99741 560 aa11.03□□□□□ -0.64
CAPN3-202ENST00000337571 CRACR2AQ9BSW2 395 aa11.03□□□□□ -0.64
CAPN3-202ENST00000337571 NUCKS1Q9H1E3 243 aaKnown RBP11.03□□□□□ -0.64
CAPN3-202ENST00000337571 RSPH9Q9H1X1 276 aaPredicted RBP11.03□□□□□ -0.64
CAPN3-202ENST00000337571 FAM204AQ9H8W3 233 aa11.03□□□□□ -0.64
CAPN3-202ENST00000337571 FBXL12Q9NXK8 326 aa11.03□□□□□ -0.64
CAPN3-202ENST00000337571 APEX2Q9UBZ4 518 aa11.03□□□□□ -0.64
CAPN3-202ENST00000337571 KLK13Q9UKR3 277 aa11.03□□□□□ -0.64
CAPN3-202ENST00000337571 ERVW-1Q9UQF0 538 aa11.03□□□□□ -0.64
CAPN3-202ENST00000337571 PCDHGB2Q9Y5G2 931 aa11.03□□□□□ -0.64
CAPN3-202ENST00000337571 ASPMQ8IZT6 3477 aa11.03□□□□□ -0.64
CAPN3-202ENST00000337571 AKAP13Q12802 2813 aa11.03□□□□□ -0.64
CAPN3-202ENST00000337571 LRRC72A6NJI9 287 aa11.02□□□□□ -0.65
CAPN3-202ENST00000337571 KCNU1A8MYU2 1149 aa11.02□□□□□ -0.65
CAPN3-202ENST00000337571 FLRT2O43155 660 aa11.02□□□□□ -0.65
CAPN3-202ENST00000337571 PAPSS1O43252 624 aaPredicted RBP11.02□□□□□ -0.65
CAPN3-202ENST00000337571 SIN3BO75182 1162 aa11.02□□□□□ -0.65
CAPN3-202ENST00000337571 SLC9A1P19634 815 aa11.02□□□□□ -0.65
CAPN3-202ENST00000337571 TACR2P21452 398 aa11.02□□□□□ -0.65
CAPN3-202ENST00000337571 CCR1P32246 355 aa11.02□□□□□ -0.65
CAPN3-202ENST00000337571 SLC8A1P32418 973 aa11.02□□□□□ -0.65
CAPN3-202ENST00000337571 KRT9P35527 623 aa11.02□□□□□ -0.65
CAPN3-202ENST00000337571 MTIF2P46199 727 aaKnown RBP11.02□□□□□ -0.65
CAPN3-202ENST00000337571 OXCT1P55809 520 aa11.02□□□□□ -0.65
CAPN3-202ENST00000337571 C21orf59P57076 290 aa11.02□□□□□ -0.65
CAPN3-202ENST00000337571 MTA1Q13330 715 aa11.02□□□□□ -0.65
CAPN3-202ENST00000337571 SLC12A1Q13621 1099 aa11.02□□□□□ -0.65
CAPN3-202ENST00000337571 EXOC3L4Q17RC7 722 aa11.02□□□□□ -0.65
CAPN3-202ENST00000337571 HNRNPA1L2Q32P51 320 aaKnown RBP11.02□□□□□ -0.65
CAPN3-202ENST00000337571 FSCBQ5H9T9 825 aa11.02□□□□□ -0.65
CAPN3-202ENST00000337571 PITRM1Q5JRX3 1037 aa11.02□□□□□ -0.65
CAPN3-202ENST00000337571 RABGAP1LQ5R372 815 aa11.02□□□□□ -0.65
CAPN3-202ENST00000337571 TTC39BQ5VTQ0 682 aaPredicted RBP11.02□□□□□ -0.65
CAPN3-202ENST00000337571 RAP1GAP2Q684P5 730 aa11.02□□□□□ -0.65
CAPN3-202ENST00000337571 TRIM65Q6PJ69 517 aa11.02□□□□□ -0.65
CAPN3-202ENST00000337571 RAB44Q7Z6P3 723 aaPredicted RBP11.02□□□□□ -0.65
CAPN3-202ENST00000337571 MMAAQ8IVH4 418 aaKnown RBP11.02□□□□□ -0.65
CAPN3-202ENST00000337571 PNPLA1Q8N8W4 532 aa11.02□□□□□ -0.65
CAPN3-202ENST00000337571 ZCCHC14Q8WYQ9 949 aaKnown RBP11.02□□□□□ -0.65
CAPN3-202ENST00000337571 GATA6Q92908 595 aa11.02□□□□□ -0.65
CAPN3-202ENST00000337571 PPP1R13BQ96KQ4 1090 aa11.02□□□□□ -0.65
CAPN3-202ENST00000337571 PRICKLE1Q96MT3 831 aaPredicted RBP11.02□□□□□ -0.65
CAPN3-202ENST00000337571 PABPC3Q9H361 631 aaKnown RBP11.02□□□□□ -0.65
CAPN3-202ENST00000337571 MTG2Q9H4K7 406 aa11.02□□□□□ -0.65
CAPN3-202ENST00000337571 SYNCQ9H7C4 482 aa11.02□□□□□ -0.65
CAPN3-202ENST00000337571 IL21RQ9HBE5 538 aa11.02□□□□□ -0.65
CAPN3-202ENST00000337571 TM9SF3Q9HD45 589 aa11.02□□□□□ -0.65
CAPN3-202ENST00000337571 OSGEPQ9NPF4 335 aa11.02□□□□□ -0.65
CAPN3-202ENST00000337571 KIAA1468Q9P260 1216 aa11.02□□□□□ -0.65
CAPN3-202ENST00000337571 PCOLCE2Q9UKZ9 415 aa11.02□□□□□ -0.65
CAPN3-202ENST00000337571 ANKRD6Q9Y2G4 727 aa11.02□□□□□ -0.65
CAPN3-202ENST00000337571 SNX11Q9Y5W9 270 aa11.02□□□□□ -0.65
CAPN3-202ENST00000337571 SYNJ2BP-COX16A0A087WUM0 186 aa11.01□□□□□ -0.65
CAPN3-202ENST00000337571 EDDM13A0A1B0GTR0 161 aa11.01□□□□□ -0.65
CAPN3-202ENST00000337571 FAM221BA6H8Z2 402 aa11.01□□□□□ -0.65
CAPN3-202ENST00000337571 TTC34A8MYJ7 566 aa11.01□□□□□ -0.65
CAPN3-202ENST00000337571 DFNA5O60443 496 aa11.01□□□□□ -0.65
CAPN3-202ENST00000337571 RNASEH2AO75792 299 aaKnown RBP11.01□□□□□ -0.65
CAPN3-202ENST00000337571 GLI1P08151 1106 aa11.01□□□□□ -0.65
CAPN3-202ENST00000337571 FTH1P19P0C7X4 201 aa11.01□□□□□ -0.65
CAPN3-202ENST00000337571 GRIA4P48058 902 aa11.01□□□□□ -0.65
CAPN3-202ENST00000337571 UBE2HP62256 183 aa11.01□□□□□ -0.65
CAPN3-202ENST00000337571 SULT2A1Q06520 285 aa11.01□□□□□ -0.65
CAPN3-202ENST00000337571 PDCLQ13371 301 aa11.01□□□□□ -0.65
CAPN3-202ENST00000337571 ARID5BQ14865 1188 aa11.01□□□□□ -0.65
CAPN3-202ENST00000337571 CST6Q15828 149 aa11.01□□□□□ -0.65
CAPN3-202ENST00000337571 KIF19Q2TAC6 998 aa11.01□□□□□ -0.65
CAPN3-202ENST00000337571 INAVAQ3KP66 663 aa11.01□□□□□ -0.65
CAPN3-202ENST00000337571 C9orf64Q5T6V5 341 aa11.01□□□□□ -0.65
CAPN3-202ENST00000337571 KIAA0895LQ68EN5 471 aa11.01□□□□□ -0.65
CAPN3-202ENST00000337571 GJB7Q6PEY0 223 aa11.01□□□□□ -0.65
CAPN3-202ENST00000337571 MMS22LQ6ZRQ5 1243 aa11.01□□□□□ -0.65
CAPN3-202ENST00000337571 SND1Q7KZF4 910 aaKnown RBP eCLIP11.01□□□□□ -0.65
CAPN3-202ENST00000337571 GLRX5Q86SX6 157 aa11.01□□□□□ -0.65
CAPN3-202ENST00000337571 FAM114A1Q8IWE2 563 aa11.01□□□□□ -0.65
CAPN3-202ENST00000337571 MLKLQ8NB16 471 aa11.01□□□□□ -0.65
CAPN3-202ENST00000337571 C1orf216Q8TAB5 229 aa11.01□□□□□ -0.65
CAPN3-202ENST00000337571 ADAMTS14Q8WXS8 1223 aa11.01□□□□□ -0.65
CAPN3-202ENST00000337571 LMLNQ96KR4 655 aa11.01□□□□□ -0.65
CAPN3-202ENST00000337571 RPL10LQ96L21 214 aaKnown RBP11.01□□□□□ -0.65
CAPN3-202ENST00000337571 MRGPRX3Q96LB0 322 aa11.01□□□□□ -0.65
CAPN3-202ENST00000337571 ACE2Q9BYF1 805 aaPredicted RBP11.01□□□□□ -0.65
CAPN3-202ENST00000337571 PDCL3Q9H2J4 239 aa11.01□□□□□ -0.65
CAPN3-202ENST00000337571 DDIT4Q9NX09 232 aa11.01□□□□□ -0.65
CAPN3-202ENST00000337571 COX16Q9P0S2 106 aa11.01□□□□□ -0.65
CAPN3-202ENST00000337571 INTS6Q9UL03 887 aaKnown RBP11.01□□□□□ -0.65
CAPN3-202ENST00000337571 FZD4Q9ULV1 537 aa11.01□□□□□ -0.65
CAPN3-202ENST00000337571 CEP295Q9C0D2 2601 aa11.01□□□□□ -0.65
CAPN3-202ENST00000337571 ZZEF1O43149 2961 aa11.01□□□□□ -0.65
CAPN3-202ENST00000337571 A0A1W2PP55 124 aa11□□□□□ -0.65
CAPN3-202ENST00000337571 GTPBP10A4D1E9 387 aaKnown RBP11□□□□□ -0.65
CAPN3-202ENST00000337571 GOLGA8CPA6NN73 597 aa11□□□□□ -0.65
CAPN3-202ENST00000337571 KCNK3O14649 394 aa11□□□□□ -0.65
CAPN3-202ENST00000337571 MID1O15344 667 aa11□□□□□ -0.65
CAPN3-202ENST00000337571 HSF2BPO75031 334 aa11□□□□□ -0.65
CAPN3-202ENST00000337571 ADH1BP00325 375 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms