RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 C6orf118Q5T5N4 469 aa15.83■□□□□ 0.12
SEC13-201ENST00000337354 TXNRD3NBQ6F5E7 133 aa15.83■□□□□ 0.12
SEC13-201ENST00000337354 RWDD4Q6NW29 188 aaKnown RBP15.83■□□□□ 0.12
SEC13-201ENST00000337354 KIAA0907Q7Z7F0 614 aaPredicted RBP15.83■□□□□ 0.12
SEC13-201ENST00000337354 PHTF2Q8N3S3 785 aa15.83■□□□□ 0.12
SEC13-201ENST00000337354 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.83■□□□□ 0.12
SEC13-201ENST00000337354 LRRC57Q8N9N7 239 aa15.83■□□□□ 0.12
SEC13-201ENST00000337354 KCTD6Q8NC69 237 aa15.83■□□□□ 0.12
SEC13-201ENST00000337354 KCNV2Q8TDN2 545 aa15.83■□□□□ 0.12
SEC13-201ENST00000337354 ATRIPQ8WXE1 791 aa15.83■□□□□ 0.12
SEC13-201ENST00000337354 HSPH1Q92598 858 aa15.83■□□□□ 0.12
SEC13-201ENST00000337354 MAGEB5Q9BZ81 275 aa15.83■□□□□ 0.12
SEC13-201ENST00000337354 TBC1D17Q9HA65 648 aa15.83■□□□□ 0.12
SEC13-201ENST00000337354 LTB4R2Q9NPC1 389 aa15.83■□□□□ 0.12
SEC13-201ENST00000337354 GPATCH2LQ9NWQ4 482 aa15.83■□□□□ 0.12
SEC13-201ENST00000337354 MPP6Q9NZW5 540 aa15.83■□□□□ 0.12
SEC13-201ENST00000337354 CLEC4EQ9ULY5 219 aa15.83■□□□□ 0.12
SEC13-201ENST00000337354 KIF26AQ9ULI4 1882 aaPredicted RBP15.83■□□□□ 0.12
SEC13-201ENST00000337354 COL4A2P08572 1712 aa15.83■□□□□ 0.12
SEC13-201ENST00000337354 GRID2IPA4D2P6 1211 aa15.82■□□□□ 0.12
SEC13-201ENST00000337354 FAM170BA6NMN3 283 aa15.82■□□□□ 0.12
SEC13-201ENST00000337354 WASH4PA8MWX3 477 aa15.82■□□□□ 0.12
SEC13-201ENST00000337354 H3BRJ5 948 aa15.82■□□□□ 0.12
SEC13-201ENST00000337354 EEF2KO00418 725 aaKnown RBP15.82■□□□□ 0.12
SEC13-201ENST00000337354 DAPK3O43293 454 aa15.82■□□□□ 0.12
SEC13-201ENST00000337354 CNTN5O94779 1100 aa15.82■□□□□ 0.12
SEC13-201ENST00000337354 MOCS3O95396 460 aa15.82■□□□□ 0.12
SEC13-201ENST00000337354 HLA-FP30511 346 aa15.82■□□□□ 0.12
SEC13-201ENST00000337354 OR1E1P30953 314 aa15.82■□□□□ 0.12
SEC13-201ENST00000337354 MAPKAPK2P49137 400 aa15.82■□□□□ 0.12
SEC13-201ENST00000337354 TPI1P60174 286 aa15.82■□□□□ 0.12
SEC13-201ENST00000337354 LRRC32Q14392 662 aa15.82■□□□□ 0.12
SEC13-201ENST00000337354 KRT81Q14533 505 aa15.82■□□□□ 0.12
SEC13-201ENST00000337354 EIF4HQ15056 248 aaKnown RBP15.82■□□□□ 0.12
SEC13-201ENST00000337354 ALFQ53S48 1182 aa15.82■□□□□ 0.12
SEC13-201ENST00000337354 PPP6R3Q5H9R7 873 aaPredicted RBP15.82■□□□□ 0.12
SEC13-201ENST00000337354 ZNF783Q6ZMS7 281 aa15.82■□□□□ 0.12
SEC13-201ENST00000337354 RFX8Q6ZV50 586 aa15.82■□□□□ 0.12
SEC13-201ENST00000337354 VSIG1Q86XK7 387 aa15.82■□□□□ 0.12
SEC13-201ENST00000337354 ZNF687Q8N1G0 1237 aa15.82■□□□□ 0.12
SEC13-201ENST00000337354 FBXL6Q8N531 539 aa15.82■□□□□ 0.12
SEC13-201ENST00000337354 TERB1Q8NA31 727 aa15.82■□□□□ 0.12
SEC13-201ENST00000337354 FLCNQ8NFG4 579 aa15.82■□□□□ 0.12
SEC13-201ENST00000337354 WFIKKN2Q8TEU8 576 aa15.82■□□□□ 0.12
SEC13-201ENST00000337354 KCTD15Q96SI1 283 aaPredicted RBP15.82■□□□□ 0.12
SEC13-201ENST00000337354 LZTFL1Q9NQ48 299 aa15.82■□□□□ 0.12
SEC13-201ENST00000337354 TMEM248Q9NWD8 314 aa15.82■□□□□ 0.12
SEC13-201ENST00000337354 STARD13Q9Y3M8 1113 aa15.82■□□□□ 0.12
SEC13-201ENST00000337354 SIT1Q9Y3P8 196 aa15.82■□□□□ 0.12
SEC13-201ENST00000337354 HCN4Q9Y3Q4 1203 aa15.82■□□□□ 0.12
SEC13-201ENST00000337354 COL4A3Q01955 1670 aa15.81■□□□□ 0.12
SEC13-201ENST00000337354 CCDC66A2RUB6 948 aa15.81■□□□□ 0.12
SEC13-201ENST00000337354 PALMO75781 387 aa15.81■□□□□ 0.12
SEC13-201ENST00000337354 CHRNB1P11230 501 aa15.81■□□□□ 0.12
SEC13-201ENST00000337354 ARSEP51690 589 aa15.81■□□□□ 0.12
SEC13-201ENST00000337354 CLCN5P51795 746 aa15.81■□□□□ 0.12
SEC13-201ENST00000337354 PLK1P53350 603 aa15.81■□□□□ 0.12
SEC13-201ENST00000337354 CDH6P55285 790 aa15.81■□□□□ 0.12
SEC13-201ENST00000337354 CCINQ13939 588 aa15.81■□□□□ 0.12
SEC13-201ENST00000337354 UBXN2BQ14CS0 331 aa15.81■□□□□ 0.12
SEC13-201ENST00000337354 ATP13A4Q4VNC1 1196 aa15.81■□□□□ 0.12
SEC13-201ENST00000337354 ODF2Q5BJF6 829 aa15.81■□□□□ 0.12
SEC13-201ENST00000337354 ZFYVE27Q5T4F4 411 aa15.81■□□□□ 0.12
SEC13-201ENST00000337354 FSTL4Q6MZW2 842 aa15.81■□□□□ 0.12
SEC13-201ENST00000337354 ANKS1BQ7Z6G8 1248 aa15.81■□□□□ 0.12
SEC13-201ENST00000337354 NLRP14Q86W24 1093 aa15.81■□□□□ 0.12
SEC13-201ENST00000337354 CPNE8Q86YQ8 564 aa15.81■□□□□ 0.12
SEC13-201ENST00000337354 AHI1Q8N157 1196 aa15.81■□□□□ 0.12
SEC13-201ENST00000337354 PJA1Q8NG27 643 aa15.81■□□□□ 0.12
SEC13-201ENST00000337354 LMLNQ96KR4 655 aa15.81■□□□□ 0.12
SEC13-201ENST00000337354 ALS2CR12Q96Q35 445 aa15.81■□□□□ 0.12
SEC13-201ENST00000337354 PCDH18Q9HCL0 1135 aa15.81■□□□□ 0.12
SEC13-201ENST00000337354 ABCB8Q9NUT2 735 aa15.81■□□□□ 0.12
SEC13-201ENST00000337354 CWC15Q9P013 229 aaKnown RBP15.81■□□□□ 0.12
SEC13-201ENST00000337354 ZNF212Q9UDV6 495 aa15.81■□□□□ 0.12
SEC13-201ENST00000337354 GGA2Q9UJY4 613 aa15.81■□□□□ 0.12
SEC13-201ENST00000337354 AMFRQ9UKV5 643 aa15.81■□□□□ 0.12
SEC13-201ENST00000337354 NDRG2Q9UN36 371 aaKnown RBP15.81■□□□□ 0.12
SEC13-201ENST00000337354 HYOU1Q9Y4L1 999 aa15.81■□□□□ 0.12
SEC13-201ENST00000337354 PCDHA3Q9Y5H8 950 aa15.81■□□□□ 0.12
SEC13-201ENST00000337354 ILVBLA1L0T0 632 aa15.8■□□□□ 0.12
SEC13-201ENST00000337354 GOLGA6L9A6NEM1 432 aa15.8■□□□□ 0.12
SEC13-201ENST00000337354 MIF4GDA9UHW6 222 aaKnown RBP15.8■□□□□ 0.12
SEC13-201ENST00000337354 ZNF487B1APH4 448 aa15.8■□□□□ 0.12
SEC13-201ENST00000337354 TRIM24O15164 1050 aa15.8■□□□□ 0.12
SEC13-201ENST00000337354 PABPC1P11940 636 aaKnown RBP15.8■□□□□ 0.12
SEC13-201ENST00000337354 GOT1P17174 413 aa15.8■□□□□ 0.12
SEC13-201ENST00000337354 COL9A1P20849 921 aa15.8■□□□□ 0.12
SEC13-201ENST00000337354 KDELR1P24390 212 aa15.8■□□□□ 0.12
SEC13-201ENST00000337354 TARSP26639 723 aaKnown RBP15.8■□□□□ 0.12
SEC13-201ENST00000337354 ETFBP38117 255 aa15.8■□□□□ 0.12
SEC13-201ENST00000337354 MAGEA9P43362 315 aa15.8■□□□□ 0.12
SEC13-201ENST00000337354 IRAK1P51617 712 aa15.8■□□□□ 0.12
SEC13-201ENST00000337354 LMAN2Q12907 356 aa15.8■□□□□ 0.12
SEC13-201ENST00000337354 FSCBQ5H9T9 825 aa15.8■□□□□ 0.12
SEC13-201ENST00000337354 NAIF1Q69YI7 327 aaPredicted RBP15.8■□□□□ 0.12
SEC13-201ENST00000337354 CXorf57Q6NSI4 855 aaKnown RBP15.8■□□□□ 0.12
SEC13-201ENST00000337354 PEX26Q7Z412 305 aa15.8■□□□□ 0.12
SEC13-201ENST00000337354 NT5DC3Q86UY8 548 aa15.8■□□□□ 0.12
SEC13-201ENST00000337354 CIR1Q86X95 450 aaPredicted RBP15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms