RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 ZNF280DQ6N043 979 aa9.07□□□□□ -0.96
SNCA-201ENST00000336904 PACS1Q6VY07 963 aa9.07□□□□□ -0.96
SNCA-201ENST00000336904 ASRGL1Q7L266 308 aa9.07□□□□□ -0.96
SNCA-201ENST00000336904 BHLHA9Q7RTU4 235 aa9.07□□□□□ -0.96
SNCA-201ENST00000336904 CIR1Q86X95 450 aaPredicted RBP9.07□□□□□ -0.96
SNCA-201ENST00000336904 ZNF354CQ86Y25 554 aa9.07□□□□□ -0.96
SNCA-201ENST00000336904 POU5F2Q8N7G0 328 aa9.07□□□□□ -0.96
SNCA-201ENST00000336904 RILPQ96NA2 401 aa9.07□□□□□ -0.96
SNCA-201ENST00000336904 MLPHQ9BV36 600 aaPredicted RBP9.07□□□□□ -0.96
SNCA-201ENST00000336904 CYLDQ9NQC7 956 aa9.07□□□□□ -0.96
SNCA-201ENST00000336904 PPARGC1AQ9UBK2 798 aaKnown RBP9.07□□□□□ -0.96
SNCA-201ENST00000336904 SDR42E2A6NKP2 422 aa9.07□□□□□ -0.96
SNCA-201ENST00000336904 TM9SF1O15321 606 aa9.07□□□□□ -0.96
SNCA-201ENST00000336904 DIAPH2O60879 1101 aa9.07□□□□□ -0.96
SNCA-201ENST00000336904 PMPCBO75439 489 aa9.07□□□□□ -0.96
SNCA-201ENST00000336904 GSTA1P08263 222 aa9.07□□□□□ -0.96
SNCA-201ENST00000336904 PRKCHP24723 683 aa9.07□□□□□ -0.96
SNCA-201ENST00000336904 LRPAP1P30533 357 aa9.07□□□□□ -0.96
SNCA-201ENST00000336904 ALDH3A1P30838 453 aa9.07□□□□□ -0.96
SNCA-201ENST00000336904 ARRB2P32121 409 aa9.07□□□□□ -0.96
SNCA-201ENST00000336904 CHRNA4P43681 627 aa9.07□□□□□ -0.96
SNCA-201ENST00000336904 MAXP61244 160 aa9.07□□□□□ -0.96
SNCA-201ENST00000336904 SLC18A2Q05940 514 aa9.07□□□□□ -0.96
SNCA-201ENST00000336904 LPIN1Q14693 890 aa9.07□□□□□ -0.96
SNCA-201ENST00000336904 SLC39A12Q504Y0 691 aa9.07□□□□□ -0.96
SNCA-201ENST00000336904 RINLQ6ZS11 566 aa9.07□□□□□ -0.96
SNCA-201ENST00000336904 IPMKQ8NFU5 416 aa9.07□□□□□ -0.96
SNCA-201ENST00000336904 DQX1Q8TE96 717 aaKnown RBP9.07□□□□□ -0.96
SNCA-201ENST00000336904 E2F7Q96AV8 911 aa9.07□□□□□ -0.96
SNCA-201ENST00000336904 FAM136AQ96C01 138 aa9.07□□□□□ -0.96
SNCA-201ENST00000336904 NMUR1Q9HB89 426 aa9.07□□□□□ -0.96
SNCA-201ENST00000336904 MAN1C1Q9NR34 630 aa9.07□□□□□ -0.96
SNCA-201ENST00000336904 ARHGEF3Q9NR81 526 aa9.07□□□□□ -0.96
SNCA-201ENST00000336904 TMEM216Q9P0N5 145 aa9.07□□□□□ -0.96
SNCA-201ENST00000336904 FAM159BA6NKW6 160 aa9.07□□□□□ -0.96
SNCA-201ENST00000336904 CHUKO15111 745 aa9.07□□□□□ -0.96
SNCA-201ENST00000336904 PHGDHO43175 533 aaKnown RBP9.07□□□□□ -0.96
SNCA-201ENST00000336904 DUSP11O75319 330 aaKnown RBP9.07□□□□□ -0.96
SNCA-201ENST00000336904 ZMPSTE24O75844 475 aa9.07□□□□□ -0.96
SNCA-201ENST00000336904 KRT38O76015 456 aa9.07□□□□□ -0.96
SNCA-201ENST00000336904 DLDP09622 509 aaKnown RBP9.07□□□□□ -0.96
SNCA-201ENST00000336904 NMBRP28336 390 aa9.07□□□□□ -0.96
SNCA-201ENST00000336904 MAGEA3P43357 314 aa9.07□□□□□ -0.96
SNCA-201ENST00000336904 FASTKD1Q53R41 847 aaKnown RBP9.07□□□□□ -0.96
SNCA-201ENST00000336904 OVOS1Q6IE37 1185 aa9.07□□□□□ -0.96
SNCA-201ENST00000336904 MIB1Q86YT6 1006 aa9.07□□□□□ -0.96
SNCA-201ENST00000336904 TREML1Q86YW5 311 aa9.07□□□□□ -0.96
SNCA-201ENST00000336904 C10orf107Q8IVU9 208 aa9.07□□□□□ -0.96
SNCA-201ENST00000336904 SLC25A41Q8N5S1 370 aa9.07□□□□□ -0.96
SNCA-201ENST00000336904 CASP10Q92851 521 aa9.07□□□□□ -0.96
SNCA-201ENST00000336904 ZFYVE28Q9HCC9 887 aa9.07□□□□□ -0.96
SNCA-201ENST00000336904 IARS2Q9NSE4 1012 aaKnown RBP9.07□□□□□ -0.96
SNCA-201ENST00000336904 TXNDC16Q9P2K2 825 aa9.07□□□□□ -0.96
SNCA-201ENST00000336904 PACSIN3Q9UKS6 424 aa9.07□□□□□ -0.96
SNCA-201ENST00000336904 EMCNQ9ULC0 261 aa9.07□□□□□ -0.96
SNCA-201ENST00000336904 SLC27A5Q9Y2P5 690 aa9.07□□□□□ -0.96
SNCA-201ENST00000336904 MTF2Q9Y483 593 aaPredicted RBP9.07□□□□□ -0.96
SNCA-201ENST00000336904 ARHGAP42A6NI28 874 aa9.06□□□□□ -0.96
SNCA-201ENST00000336904 FCHO1O14526 889 aa9.06□□□□□ -0.96
SNCA-201ENST00000336904 DDHD2O94830 711 aa9.06□□□□□ -0.96
SNCA-201ENST00000336904 HAUS5O94927 633 aa9.06□□□□□ -0.96
SNCA-201ENST00000336904 CSPG5O95196 566 aa9.06□□□□□ -0.96
SNCA-201ENST00000336904 ITGA2BP08514 1039 aa9.06□□□□□ -0.96
SNCA-201ENST00000336904 CYBAP13498 195 aa9.06□□□□□ -0.96
SNCA-201ENST00000336904 ALADP13716 330 aa9.06□□□□□ -0.96
SNCA-201ENST00000336904 ZFXP17010 805 aaPredicted RBP9.06□□□□□ -0.96
SNCA-201ENST00000336904 TYK2P29597 1187 aa9.06□□□□□ -0.96
SNCA-201ENST00000336904 OR1G1P47890 313 aa9.06□□□□□ -0.96
SNCA-201ENST00000336904 NR2C2P49116 596 aa9.06□□□□□ -0.96
SNCA-201ENST00000336904 FKBP1BP68106 108 aa9.06□□□□□ -0.96
SNCA-201ENST00000336904 PDK1Q15118 436 aa9.06□□□□□ -0.96
SNCA-201ENST00000336904 TAF2Q6P1X5 1199 aa9.06□□□□□ -0.96
SNCA-201ENST00000336904 STRA8Q7Z7C7 330 aa9.06□□□□□ -0.96
SNCA-201ENST00000336904 C14orf80Q86SX3 495 aa9.06□□□□□ -0.96
SNCA-201ENST00000336904 FAM13CQ8NE31 585 aa9.06□□□□□ -0.96
SNCA-201ENST00000336904 DTX3LQ8TDB6 740 aa9.06□□□□□ -0.96
SNCA-201ENST00000336904 SMARCD1Q96GM5 515 aa9.06□□□□□ -0.96
SNCA-201ENST00000336904 SLC2A13Q96QE2 648 aa9.06□□□□□ -0.96
SNCA-201ENST00000336904 PNPOQ9NVS9 261 aa9.06□□□□□ -0.96
SNCA-201ENST00000336904 OSER1Q9NX31 292 aa9.06□□□□□ -0.96
SNCA-201ENST00000336904 FBXW11Q9UKB1 542 aa9.06□□□□□ -0.96
SNCA-201ENST00000336904 VANGL2Q9ULK5 521 aa9.06□□□□□ -0.96
SNCA-201ENST00000336904 TRPM7Q96QT4 1865 aa9.06□□□□□ -0.96
SNCA-201ENST00000336904 PPP1R12AO14974 1030 aaPredicted RBP9.06□□□□□ -0.96
SNCA-201ENST00000336904 BUD23O43709 281 aaKnown RBP9.06□□□□□ -0.96
SNCA-201ENST00000336904 STK10O94804 968 aaKnown RBP9.06□□□□□ -0.96
SNCA-201ENST00000336904 DHRS4L1P0CG22 281 aa9.06□□□□□ -0.96
SNCA-201ENST00000336904 SLC5A3P53794 718 aa9.06□□□□□ -0.96
SNCA-201ENST00000336904 CDC42EP1Q00587 391 aa9.06□□□□□ -0.96
SNCA-201ENST00000336904 USP4Q13107 963 aa9.06□□□□□ -0.96
SNCA-201ENST00000336904 CTC1Q2NKJ3 1217 aa9.06□□□□□ -0.96
SNCA-201ENST00000336904 CD300LGQ6UXG3 332 aa9.06□□□□□ -0.96
SNCA-201ENST00000336904 SERINC5Q86VE9 423 aa9.06□□□□□ -0.96
SNCA-201ENST00000336904 SUGP1Q8IWZ8 645 aaKnown RBP9.06□□□□□ -0.96
SNCA-201ENST00000336904 DCLK2Q8N568 766 aa9.06□□□□□ -0.96
SNCA-201ENST00000336904 CNTD1Q8N815 330 aa9.06□□□□□ -0.96
SNCA-201ENST00000336904 ATAD1Q8NBU5 361 aa9.06□□□□□ -0.96
SNCA-201ENST00000336904 NT5C3BQ969T7 300 aa9.06□□□□□ -0.96
SNCA-201ENST00000336904 GRAMD1AQ96CP6 724 aa9.06□□□□□ -0.96
SNCA-201ENST00000336904 SGF29Q96ES7 293 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms