RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 DTLQ9NZJ0 730 aa8.42□□□□□ -1.06
HPS4-201ENST00000336873 THEGQ9P2T0 379 aa8.42□□□□□ -1.06
HPS4-201ENST00000336873 RGS17Q9UGC6 210 aaPredicted RBP8.42□□□□□ -1.06
HPS4-201ENST00000336873 EVPLQ92817 2033 aa8.42□□□□□ -1.06
HPS4-201ENST00000336873 RNF103-CHMP3A0A140T963 221 aa8.42□□□□□ -1.06
HPS4-201ENST00000336873 SPDYE5A6NIY4 337 aa8.42□□□□□ -1.06
HPS4-201ENST00000336873 NT5C1B-RDH14C9J2C7 533 aa8.42□□□□□ -1.06
HPS4-201ENST00000336873 BEST1O76090 585 aa8.42□□□□□ -1.06
HPS4-201ENST00000336873 PIGNO95427 931 aa8.42□□□□□ -1.06
HPS4-201ENST00000336873 CHRNGP07510 517 aa8.42□□□□□ -1.06
HPS4-201ENST00000336873 ITGA2BP08514 1039 aa8.42□□□□□ -1.06
HPS4-201ENST00000336873 GFAPP14136 432 aa8.42□□□□□ -1.06
HPS4-201ENST00000336873 CPB1P15086 417 aa8.42□□□□□ -1.06
HPS4-201ENST00000336873 CACNA2D1P54289 1103 aa8.42□□□□□ -1.06
HPS4-201ENST00000336873 ACVR2BQ13705 512 aa8.42□□□□□ -1.06
HPS4-201ENST00000336873 PDK2Q15119 407 aa8.42□□□□□ -1.06
HPS4-201ENST00000336873 EFHC1Q5JVL4 640 aa8.42□□□□□ -1.06
HPS4-201ENST00000336873 ZNF470Q6ECI4 717 aa8.42□□□□□ -1.06
HPS4-201ENST00000336873 ADGRD1Q6QNK2 874 aa8.42□□□□□ -1.06
HPS4-201ENST00000336873 C10orf82Q8WW14 230 aa8.42□□□□□ -1.06
HPS4-201ENST00000336873 ITFG2Q969R8 447 aa8.42□□□□□ -1.06
HPS4-201ENST00000336873 SENP8Q96LD8 212 aa8.42□□□□□ -1.06
HPS4-201ENST00000336873 ZNF560Q96MR9 790 aa8.42□□□□□ -1.06
HPS4-201ENST00000336873 ZNF778Q96MU6 729 aa8.42□□□□□ -1.06
HPS4-201ENST00000336873 FAM210AQ96ND0 272 aa8.42□□□□□ -1.06
HPS4-201ENST00000336873 KCTD15Q96SI1 283 aaPredicted RBP8.42□□□□□ -1.06
HPS4-201ENST00000336873 ASB7Q9H672 318 aa8.42□□□□□ -1.06
HPS4-201ENST00000336873 ABT1Q9ULW3 272 aaKnown RBP8.42□□□□□ -1.06
HPS4-201ENST00000336873 ARHGAP26Q9UNA1 814 aa8.42□□□□□ -1.06
HPS4-201ENST00000336873 RBBP6Q7Z6E9 1792 aaKnown RBP8.42□□□□□ -1.06
HPS4-201ENST00000336873 SMIM28A0A1B0GU29 152 aa8.42□□□□□ -1.06
HPS4-201ENST00000336873 SLC15A5A6NIM6 579 aa8.42□□□□□ -1.06
HPS4-201ENST00000336873 YJEFN3A6XGL0 299 aa8.42□□□□□ -1.06
HPS4-201ENST00000336873 E7ENQ6 273 aa8.42□□□□□ -1.06
HPS4-201ENST00000336873 ZBTB24O43167 697 aaPredicted RBP8.42□□□□□ -1.06
HPS4-201ENST00000336873 B4GALT4O60513 344 aa8.42□□□□□ -1.06
HPS4-201ENST00000336873 PSMG1O95456 288 aa8.42□□□□□ -1.06
HPS4-201ENST00000336873 MCF2P10911 925 aa8.42□□□□□ -1.06
HPS4-201ENST00000336873 OAZ1P54368 228 aa8.42□□□□□ -1.06
HPS4-201ENST00000336873 EFEMP1Q12805 493 aa8.42□□□□□ -1.06
HPS4-201ENST00000336873 SLC10A2Q12908 348 aaPredicted RBP8.42□□□□□ -1.06
HPS4-201ENST00000336873 FLOT2Q14254 428 aa8.42□□□□□ -1.06
HPS4-201ENST00000336873 ACAP1Q15027 740 aa8.42□□□□□ -1.06
HPS4-201ENST00000336873 STILQ15468 1287 aa8.42□□□□□ -1.06
HPS4-201ENST00000336873 SGO1Q5FBB7 561 aa8.42□□□□□ -1.06
HPS4-201ENST00000336873 TSHZ1Q6ZSZ6 1077 aa8.42□□□□□ -1.06
HPS4-201ENST00000336873 ACAD11Q709F0 780 aa8.42□□□□□ -1.06
HPS4-201ENST00000336873 SLC41A1Q8IVJ1 513 aa8.42□□□□□ -1.06
HPS4-201ENST00000336873 DENND6AQ8IWF6 608 aa8.42□□□□□ -1.06
HPS4-201ENST00000336873 TRIML2Q8N7C3 387 aa8.42□□□□□ -1.06
HPS4-201ENST00000336873 BANPQ8N9N5 519 aa8.42□□□□□ -1.06
HPS4-201ENST00000336873 TDRD5Q8NAT2 981 aaKnown RBP8.42□□□□□ -1.06
HPS4-201ENST00000336873 B3GALNT2Q8NCR0 500 aa8.42□□□□□ -1.06
HPS4-201ENST00000336873 DCAKDQ8WVC6 231 aa8.42□□□□□ -1.06
HPS4-201ENST00000336873 ESAMQ96AP7 390 aa8.42□□□□□ -1.06
HPS4-201ENST00000336873 EME1Q96AY2 570 aa8.42□□□□□ -1.06
HPS4-201ENST00000336873 NIFKQ9BYG3 293 aaKnown RBP8.42□□□□□ -1.06
HPS4-201ENST00000336873 COPS7BQ9H9Q2 264 aaPredicted RBP8.42□□□□□ -1.06
HPS4-201ENST00000336873 ARHGEF3Q9NR81 526 aa8.42□□□□□ -1.06
HPS4-201ENST00000336873 GGA2Q9UJY4 613 aa8.42□□□□□ -1.06
HPS4-201ENST00000336873 TSPAN1O60635 241 aa8.41□□□□□ -1.06
HPS4-201ENST00000336873 SUPT3HO75486 399 aa8.41□□□□□ -1.06
HPS4-201ENST00000336873 SOAT2O75908 522 aa8.41□□□□□ -1.06
HPS4-201ENST00000336873 PARNO95453 639 aaKnown RBP8.41□□□□□ -1.06
HPS4-201ENST00000336873 GM2AP17900 193 aa8.41□□□□□ -1.06
HPS4-201ENST00000336873 ZNF157P51786 506 aaPredicted RBP8.41□□□□□ -1.06
HPS4-201ENST00000336873 CCNHP51946 323 aaPredicted RBP8.41□□□□□ -1.06
HPS4-201ENST00000336873 NEK3P51956 506 aa8.41□□□□□ -1.06
HPS4-201ENST00000336873 RTP1P59025 263 aa8.41□□□□□ -1.06
HPS4-201ENST00000336873 PTP4A2Q12974 167 aa8.41□□□□□ -1.06
HPS4-201ENST00000336873 MGAT5BQ3V5L5 792 aa8.41□□□□□ -1.06
HPS4-201ENST00000336873 PITRM1Q5JRX3 1037 aa8.41□□□□□ -1.06
HPS4-201ENST00000336873 LRRC38Q5VT99 294 aa8.41□□□□□ -1.06
HPS4-201ENST00000336873 TLK2Q86UE8 772 aa8.41□□□□□ -1.06
HPS4-201ENST00000336873 KCNMB4Q86W47 210 aa8.41□□□□□ -1.06
HPS4-201ENST00000336873 TREML1Q86YW5 311 aa8.41□□□□□ -1.06
HPS4-201ENST00000336873 PDZD8Q8NEN9 1154 aa8.41□□□□□ -1.06
HPS4-201ENST00000336873 SCAMP5Q8TAC9 235 aa8.41□□□□□ -1.06
HPS4-201ENST00000336873 SP110Q9HB58 689 aa8.41□□□□□ -1.06
HPS4-201ENST00000336873 CHCHD3Q9NX63 227 aaKnown RBP8.41□□□□□ -1.06
HPS4-201ENST00000336873 SYNPO2Q9UMS6 1093 aa8.41□□□□□ -1.06
HPS4-201ENST00000336873 STX16-NPEPL1H3BU86 382 aa8.41□□□□□ -1.06
HPS4-201ENST00000336873 TP73O15350 636 aa8.41□□□□□ -1.06
HPS4-201ENST00000336873 SNUPNO95149 360 aaKnown RBP8.41□□□□□ -1.06
HPS4-201ENST00000336873 STBD1O95210 358 aa8.41□□□□□ -1.06
HPS4-201ENST00000336873 MT-ND1P03886 318 aa8.41□□□□□ -1.06
HPS4-201ENST00000336873 TPBGLP0DKB5 382 aa8.41□□□□□ -1.06
HPS4-201ENST00000336873 RAG1P15918 1043 aa8.41□□□□□ -1.06
HPS4-201ENST00000336873 ZFXP17010 805 aaPredicted RBP8.41□□□□□ -1.06
HPS4-201ENST00000336873 ITGB6P18564 788 aa8.41□□□□□ -1.06
HPS4-201ENST00000336873 MPSTP25325 297 aa8.41□□□□□ -1.06
HPS4-201ENST00000336873 PBX3P40426 434 aa8.41□□□□□ -1.06
HPS4-201ENST00000336873 CCL14Q16627 93 aa8.41□□□□□ -1.06
HPS4-201ENST00000336873 SPDYCQ5MJ68 293 aa8.41□□□□□ -1.06
HPS4-201ENST00000336873 C15orf39Q6ZRI6 1047 aa8.41□□□□□ -1.06
HPS4-201ENST00000336873 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.41□□□□□ -1.06
HPS4-201ENST00000336873 FAXDC2Q96IV6 333 aa8.41□□□□□ -1.06
HPS4-201ENST00000336873 SYT15Q9BQS2 421 aa8.41□□□□□ -1.06
HPS4-201ENST00000336873 PHACTR1Q9C0D0 580 aa8.41□□□□□ -1.06
HPS4-201ENST00000336873 TMEM165Q9HC07 324 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms