RNA–Protein interactions for RNA: ENST00000336596.6

EPHA3-201, Transcript of EPH receptor A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHA3, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-201ENST00000336596 NT5MQ9NPB1 228 aa7.5□□□□□ -1.21
EPHA3-201ENST00000336596 SUCOQ9UBS9 1254 aaKnown RBP7.5□□□□□ -1.21
EPHA3-201ENST00000336596 CLDN11O75508 207 aa7.5□□□□□ -1.21
EPHA3-201ENST00000336596 KLHL2O95198 593 aa7.5□□□□□ -1.21
EPHA3-201ENST00000336596 NPR3P17342 541 aa7.5□□□□□ -1.21
EPHA3-201ENST00000336596 NDUFS1P28331 727 aa7.5□□□□□ -1.21
EPHA3-201ENST00000336596 CRABP2P29373 138 aa7.5□□□□□ -1.21
EPHA3-201ENST00000336596 PTPN9P43378 593 aa7.5□□□□□ -1.21
EPHA3-201ENST00000336596 PRKCZQ05513 592 aa7.5□□□□□ -1.21
EPHA3-201ENST00000336596 SPIDRQ14159 915 aa7.5□□□□□ -1.21
EPHA3-201ENST00000336596 RAET1GQ6H3X3 334 aa7.5□□□□□ -1.21
EPHA3-201ENST00000336596 MCEMP1Q8IX19 187 aa7.5□□□□□ -1.21
EPHA3-201ENST00000336596 KIAA0895Q8NCT3 520 aa7.5□□□□□ -1.21
EPHA3-201ENST00000336596 MYRIPQ8NFW9 859 aa7.5□□□□□ -1.21
EPHA3-201ENST00000336596 SLC30A5Q8TAD4 765 aa7.5□□□□□ -1.21
EPHA3-201ENST00000336596 FAM162AQ96A26 154 aa7.5□□□□□ -1.21
EPHA3-201ENST00000336596 FEM1CQ96JP0 617 aa7.5□□□□□ -1.21
EPHA3-201ENST00000336596 EBNA1BP2Q99848 306 aaKnown RBP7.5□□□□□ -1.21
EPHA3-201ENST00000336596 ROPN1BQ9BZX4 212 aaPredicted RBP7.5□□□□□ -1.21
EPHA3-201ENST00000336596 ROGDIQ9GZN7 287 aa7.5□□□□□ -1.21
EPHA3-201ENST00000336596 ROPN1Q9HAT0 212 aaPredicted RBP7.5□□□□□ -1.21
EPHA3-201ENST00000336596 CYLDQ9NQC7 956 aa7.5□□□□□ -1.21
EPHA3-201ENST00000336596 PCDHGB3Q9Y5G1 929 aa7.5□□□□□ -1.21
EPHA3-201ENST00000336596 CAPN7Q9Y6W3 813 aa7.5□□□□□ -1.21
EPHA3-201ENST00000336596 UBR2Q8IWV8 1755 aa7.5□□□□□ -1.21
EPHA3-201ENST00000336596 C16orf96A6NNT2 1141 aa7.5□□□□□ -1.21
EPHA3-201ENST00000336596 WWP2O00308 870 aa7.5□□□□□ -1.21
EPHA3-201ENST00000336596 FPGTO14772 594 aa7.5□□□□□ -1.21
EPHA3-201ENST00000336596 NPC1O15118 1278 aa7.5□□□□□ -1.21
EPHA3-201ENST00000336596 DAB1O75553 588 aa7.5□□□□□ -1.21
EPHA3-201ENST00000336596 SLC35G4P0C7Q5 338 aa7.5□□□□□ -1.21
EPHA3-201ENST00000336596 PCNAP12004 261 aa7.5□□□□□ -1.21
EPHA3-201ENST00000336596 GABRR2P28476 465 aa7.5□□□□□ -1.21
EPHA3-201ENST00000336596 OAS2P29728 719 aaKnown RBP7.5□□□□□ -1.21
EPHA3-201ENST00000336596 SCNN1BP51168 640 aa7.5□□□□□ -1.21
EPHA3-201ENST00000336596 NRLP54845 237 aa7.5□□□□□ -1.21
EPHA3-201ENST00000336596 UBE3AQ05086 875 aa7.5□□□□□ -1.21
EPHA3-201ENST00000336596 ITGB3BPQ13352 177 aaPredicted RBP7.5□□□□□ -1.21
EPHA3-201ENST00000336596 RRP1BQ14684 758 aaKnown RBP7.5□□□□□ -1.21
EPHA3-201ENST00000336596 AMHR2Q16671 573 aa7.5□□□□□ -1.21
EPHA3-201ENST00000336596 ATP13A4Q4VNC1 1196 aa7.5□□□□□ -1.21
EPHA3-201ENST00000336596 SPANXN3Q5MJ09 141 aa7.5□□□□□ -1.21
EPHA3-201ENST00000336596 FAXCQ5TGI0 409 aa7.5□□□□□ -1.21
EPHA3-201ENST00000336596 AFTPHQ6ULP2 937 aa7.5□□□□□ -1.21
EPHA3-201ENST00000336596 RBM43Q6ZSC3 357 aaKnown RBP7.5□□□□□ -1.21
EPHA3-201ENST00000336596 GLT6D1Q7Z4J2 308 aa7.5□□□□□ -1.21
EPHA3-201ENST00000336596 CAMK1DQ8IU85 385 aa7.5□□□□□ -1.21
EPHA3-201ENST00000336596 AGAP3Q96P47 875 aa7.5□□□□□ -1.21
EPHA3-201ENST00000336596 ERGIC2Q96RQ1 377 aa7.5□□□□□ -1.21
EPHA3-201ENST00000336596 POLG2Q9UHN1 485 aa7.5□□□□□ -1.21
EPHA3-201ENST00000336596 ZNF214Q9UL59 606 aaPredicted RBP7.5□□□□□ -1.21
EPHA3-201ENST00000336596 ZMYND8Q9ULU4 1186 aaPredicted RBP7.5□□□□□ -1.21
EPHA3-201ENST00000336596 H3BNH8 94 aa7.49□□□□□ -1.21
EPHA3-201ENST00000336596 ZSCAN9O15535 394 aaPredicted RBP7.49□□□□□ -1.21
EPHA3-201ENST00000336596 AKAP3O75969 853 aa7.49□□□□□ -1.21
EPHA3-201ENST00000336596 SYPP08247 313 aa7.49□□□□□ -1.21
EPHA3-201ENST00000336596 TPBGLP0DKB5 382 aa7.49□□□□□ -1.21
EPHA3-201ENST00000336596 KRT4P19013 534 aa7.49□□□□□ -1.21
EPHA3-201ENST00000336596 ATP4AP20648 1035 aa7.49□□□□□ -1.21
EPHA3-201ENST00000336596 HOXC12P31275 282 aa7.49□□□□□ -1.21
EPHA3-201ENST00000336596 C1orf186Q6ZWK4 172 aa7.49□□□□□ -1.21
EPHA3-201ENST00000336596 C11orf96Q7Z7L8 435 aa7.49□□□□□ -1.21
EPHA3-201ENST00000336596 MON1AQ86VX9 555 aa7.49□□□□□ -1.21
EPHA3-201ENST00000336596 UHMK1Q8TAS1 419 aaKnown RBP7.49□□□□□ -1.21
EPHA3-201ENST00000336596 CLEC4DQ8WXI8 215 aa7.49□□□□□ -1.21
EPHA3-201ENST00000336596 PAWRQ96IZ0 340 aaKnown RBP7.49□□□□□ -1.21
EPHA3-201ENST00000336596 ZNF333Q96JL9 665 aa7.49□□□□□ -1.21
EPHA3-201ENST00000336596 PITPNM3Q9BZ71 974 aa7.49□□□□□ -1.21
EPHA3-201ENST00000336596 IRX2Q9BZI1 471 aaPredicted RBP7.49□□□□□ -1.21
EPHA3-201ENST00000336596 KCNN2Q9H2S1 579 aa7.49□□□□□ -1.21
EPHA3-201ENST00000336596 C8orf33Q9H7E9 229 aaPredicted RBP7.49□□□□□ -1.21
EPHA3-201ENST00000336596 CLDND1Q9NY35 253 aa7.49□□□□□ -1.21
EPHA3-201ENST00000336596 RBPJLQ9UBG7 517 aa7.49□□□□□ -1.21
EPHA3-201ENST00000336596 TTC7AQ9ULT0 858 aaPredicted RBP7.49□□□□□ -1.21
EPHA3-201ENST00000336596 ADGRG1Q9Y653 693 aa7.49□□□□□ -1.21
EPHA3-201ENST00000336596 CAPN14A8MX76 684 aa7.49□□□□□ -1.21
EPHA3-201ENST00000336596 TEX28O15482 410 aa7.49□□□□□ -1.21
EPHA3-201ENST00000336596 TREHO43280 583 aa7.49□□□□□ -1.21
EPHA3-201ENST00000336596 ACSL3O95573 720 aa7.49□□□□□ -1.21
EPHA3-201ENST00000336596 NDST1P52848 882 aa7.49□□□□□ -1.21
EPHA3-201ENST00000336596 TFDP3Q5H9I0 405 aa7.49□□□□□ -1.21
EPHA3-201ENST00000336596 ANO5Q75V66 913 aa7.49□□□□□ -1.21
EPHA3-201ENST00000336596 ING2Q9H160 280 aa7.49□□□□□ -1.21
EPHA3-201ENST00000336596 ELOVL6Q9H5J4 265 aa7.49□□□□□ -1.21
EPHA3-201ENST00000336596 FBRSQ9HAH7 460 aa7.49□□□□□ -1.21
EPHA3-201ENST00000336596 CACNA2D2Q9NY47 1150 aa7.49□□□□□ -1.21
EPHA3-201ENST00000336596 PPARGC1AQ9UBK2 798 aaKnown RBP7.49□□□□□ -1.21
EPHA3-201ENST00000336596 BLOC1S6Q9UL45 172 aa7.49□□□□□ -1.21
EPHA3-201ENST00000336596 TMCC3Q9ULS5 477 aa7.49□□□□□ -1.21
EPHA3-201ENST00000336596 SNED1Q8TER0 1413 aa7.49□□□□□ -1.21
EPHA3-201ENST00000336596 NEMP2A6NFY4 417 aa7.49□□□□□ -1.21
EPHA3-201ENST00000336596 H3BQF6 201 aa7.49□□□□□ -1.21
EPHA3-201ENST00000336596 TSPAN3O60637 253 aa7.49□□□□□ -1.21
EPHA3-201ENST00000336596 LYPLA2O95372 231 aa7.49□□□□□ -1.21
EPHA3-201ENST00000336596 CYP1A1P04798 512 aaPredicted RBP7.49□□□□□ -1.21
EPHA3-201ENST00000336596 RB1P06400 928 aa7.49□□□□□ -1.21
EPHA3-201ENST00000336596 AGXTP21549 392 aa7.49□□□□□ -1.21
EPHA3-201ENST00000336596 AKAP5P24588 427 aa7.49□□□□□ -1.21
EPHA3-201ENST00000336596 KLK7P49862 253 aa7.49□□□□□ -1.21
EPHA3-201ENST00000336596 MARSP56192 900 aaKnown RBP7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms