RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 ACTL7AQ9Y615 435 aa12.91□□□□□ -0.34
LIMK1-201ENST00000336180 PRRC2BQ5JSZ5 2229 aaKnown RBP12.91□□□□□ -0.34
LIMK1-201ENST00000336180 TBKBP1A7MCY6 615 aa12.9□□□□□ -0.34
LIMK1-201ENST00000336180 PMPCBO75439 489 aa12.9□□□□□ -0.34
LIMK1-201ENST00000336180 SCTRP47872 440 aa12.9□□□□□ -0.34
LIMK1-201ENST00000336180 RAB27AP51159 221 aa12.9□□□□□ -0.34
LIMK1-201ENST00000336180 IRF5Q13568 498 aa12.9□□□□□ -0.34
LIMK1-201ENST00000336180 CMC1Q7Z7K0 106 aa12.9□□□□□ -0.34
LIMK1-201ENST00000336180 ANKS4BQ8N8V4 417 aa12.9□□□□□ -0.34
LIMK1-201ENST00000336180 IPMKQ8NFU5 416 aa12.9□□□□□ -0.34
LIMK1-201ENST00000336180 ZNF669Q96BR6 464 aaPredicted RBP12.9□□□□□ -0.34
LIMK1-201ENST00000336180 BRD8Q9H0E9 1235 aa12.9□□□□□ -0.34
LIMK1-201ENST00000336180 CAB39LQ9H9S4 337 aa12.9□□□□□ -0.34
LIMK1-201ENST00000336180 SLC24A2Q9UI40 661 aa12.9□□□□□ -0.34
LIMK1-201ENST00000336180 A0A0G2JND7 137 aa12.9□□□□□ -0.34
LIMK1-201ENST00000336180 CFAP69A5D8W1 941 aa12.9□□□□□ -0.34
LIMK1-201ENST00000336180 CCL22O00626 93 aa12.9□□□□□ -0.34
LIMK1-201ENST00000336180 NEBLO76041 1014 aa12.9□□□□□ -0.34
LIMK1-201ENST00000336180 ETFBP38117 255 aa12.9□□□□□ -0.34
LIMK1-201ENST00000336180 CHRNA4P43681 627 aa12.9□□□□□ -0.34
LIMK1-201ENST00000336180 DUSP4Q13115 394 aa12.9□□□□□ -0.34
LIMK1-201ENST00000336180 ARL13BQ3SXY8 428 aa12.9□□□□□ -0.34
LIMK1-201ENST00000336180 RTP2Q5QGT7 225 aa12.9□□□□□ -0.34
LIMK1-201ENST00000336180 ZNF449Q6P9G9 518 aa12.9□□□□□ -0.34
LIMK1-201ENST00000336180 COLGALT2Q8IYK4 626 aa12.9□□□□□ -0.34
LIMK1-201ENST00000336180 FITM2Q8N6M3 262 aa12.9□□□□□ -0.34
LIMK1-201ENST00000336180 RFWD2Q8NHY2 731 aa12.9□□□□□ -0.34
LIMK1-201ENST00000336180 BCL7CQ8WUZ0 217 aaPredicted RBP12.9□□□□□ -0.34
LIMK1-201ENST00000336180 CCT6BQ92526 530 aa12.9□□□□□ -0.34
LIMK1-201ENST00000336180 ZNF75CPQ92670 426 aaPredicted RBP12.9□□□□□ -0.34
LIMK1-201ENST00000336180 BHMTQ93088 406 aa12.9□□□□□ -0.34
LIMK1-201ENST00000336180 MAGEB18Q96M61 343 aa12.9□□□□□ -0.34
LIMK1-201ENST00000336180 PKMYT1Q99640 499 aa12.9□□□□□ -0.34
LIMK1-201ENST00000336180 CHRAC1Q9NRG0 131 aa12.9□□□□□ -0.34
LIMK1-201ENST00000336180 RGS18Q9NS28 235 aa12.9□□□□□ -0.34
LIMK1-201ENST00000336180 HMX2A2RU54 273 aa12.9□□□□□ -0.34
LIMK1-201ENST00000336180 TPD52L2O43399 206 aaKnown RBP12.9□□□□□ -0.34
LIMK1-201ENST00000336180 CNTN5O94779 1100 aa12.9□□□□□ -0.34
LIMK1-201ENST00000336180 FBXO21O94952 628 aa12.9□□□□□ -0.34
LIMK1-201ENST00000336180 C1QAP02745 245 aa12.9□□□□□ -0.34
LIMK1-201ENST00000336180 MAGEA9P43362 315 aa12.9□□□□□ -0.34
LIMK1-201ENST00000336180 NR2C2P49116 596 aa12.9□□□□□ -0.34
LIMK1-201ENST00000336180 SLC11A1P49279 550 aa12.9□□□□□ -0.34
LIMK1-201ENST00000336180 TUBP50607 506 aa12.9□□□□□ -0.34
LIMK1-201ENST00000336180 PRKD1Q15139 912 aaPredicted RBP12.9□□□□□ -0.34
LIMK1-201ENST00000336180 DLG2Q15700 870 aa12.9□□□□□ -0.34
LIMK1-201ENST00000336180 TRPM8Q7Z2W7 1104 aa12.9□□□□□ -0.34
LIMK1-201ENST00000336180 NDUFAF2Q8N183 169 aa12.9□□□□□ -0.34
LIMK1-201ENST00000336180 CFAP52Q8N1V2 620 aa12.9□□□□□ -0.34
LIMK1-201ENST00000336180 ACVR1CQ8NER5 493 aa12.9□□□□□ -0.34
LIMK1-201ENST00000336180 RTP4Q96DX8 246 aa12.9□□□□□ -0.34
LIMK1-201ENST00000336180 MYEOVQ96EZ4 313 aa12.9□□□□□ -0.34
LIMK1-201ENST00000336180 PRR11Q96HE9 360 aaPredicted RBP12.9□□□□□ -0.34
LIMK1-201ENST00000336180 MLPHQ9BV36 600 aaPredicted RBP12.9□□□□□ -0.34
LIMK1-201ENST00000336180 NSRP1Q9H0G5 558 aaKnown RBP12.9□□□□□ -0.34
LIMK1-201ENST00000336180 ARHGAP42A6NI28 874 aa12.89□□□□□ -0.35
LIMK1-201ENST00000336180 M0QZQ0 153 aa12.89□□□□□ -0.35
LIMK1-201ENST00000336180 CA8P35219 290 aa12.89□□□□□ -0.35
LIMK1-201ENST00000336180 ITKQ08881 620 aa12.89□□□□□ -0.35
LIMK1-201ENST00000336180 POU6F1Q14863 301 aa12.89□□□□□ -0.35
LIMK1-201ENST00000336180 MAP3K21Q5TCX8 1036 aa12.89□□□□□ -0.35
LIMK1-201ENST00000336180 RNF19BQ6ZMZ0 732 aa12.89□□□□□ -0.35
LIMK1-201ENST00000336180 OTOAQ7RTW8 1153 aa12.89□□□□□ -0.35
LIMK1-201ENST00000336180 CNTD1Q8N815 330 aa12.89□□□□□ -0.35
LIMK1-201ENST00000336180 BANPQ8N9N5 519 aa12.89□□□□□ -0.35
LIMK1-201ENST00000336180 URGCPQ8TCY9 931 aa12.89□□□□□ -0.35
LIMK1-201ENST00000336180 AUTS2Q8WXX7 1259 aa12.89□□□□□ -0.35
LIMK1-201ENST00000336180 TMEM237Q96Q45 408 aa12.89□□□□□ -0.35
LIMK1-201ENST00000336180 SRPK1Q96SB4 655 aaKnown RBP12.89□□□□□ -0.35
LIMK1-201ENST00000336180 EPAS1Q99814 870 aa12.89□□□□□ -0.35
LIMK1-201ENST00000336180 IQCGQ9H095 443 aaKnown RBP12.89□□□□□ -0.35
LIMK1-201ENST00000336180 LRFN2Q9ULH4 789 aa12.89□□□□□ -0.35
LIMK1-201ENST00000336180 STK38LQ9Y2H1 464 aa12.89□□□□□ -0.35
LIMK1-201ENST00000336180 NUMBLQ9Y6R0 609 aa12.89□□□□□ -0.35
LIMK1-201ENST00000336180 CHD7Q9P2D1 2997 aa12.89□□□□□ -0.35
LIMK1-201ENST00000336180 COPEO14579 308 aa12.89□□□□□ -0.35
LIMK1-201ENST00000336180 ENPP3O14638 875 aa12.89□□□□□ -0.35
LIMK1-201ENST00000336180 STK10O94804 968 aaKnown RBP12.89□□□□□ -0.35
LIMK1-201ENST00000336180 CES4AQ5XG92 561 aa12.89□□□□□ -0.35
LIMK1-201ENST00000336180 FAM219BQ5XKK7 198 aa12.89□□□□□ -0.35
LIMK1-201ENST00000336180 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.89□□□□□ -0.35
LIMK1-201ENST00000336180 CEP128Q6ZU80 1094 aa12.89□□□□□ -0.35
LIMK1-201ENST00000336180 SLC26A11Q86WA9 606 aa12.89□□□□□ -0.35
LIMK1-201ENST00000336180 SLC25A41Q8N5S1 370 aa12.89□□□□□ -0.35
LIMK1-201ENST00000336180 ARNTL2Q8WYA1 636 aa12.89□□□□□ -0.35
LIMK1-201ENST00000336180 OXNAD1Q96HP4 312 aaPredicted RBP12.89□□□□□ -0.35
LIMK1-201ENST00000336180 SLC39A8Q9C0K1 460 aa12.89□□□□□ -0.35
LIMK1-201ENST00000336180 PCDHB7Q9Y5E2 793 aa12.89□□□□□ -0.35
LIMK1-201ENST00000336180 TDRD15B5MCY1 1934 aaKnown RBP12.89□□□□□ -0.35
LIMK1-201ENST00000336180 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.88□□□□□ -0.35
LIMK1-201ENST00000336180 DNAJC6O75061 913 aa12.88□□□□□ -0.35
LIMK1-201ENST00000336180 CAPN15O75808 1086 aa12.88□□□□□ -0.35
LIMK1-201ENST00000336180 DNAJB2P25686 324 aa12.88□□□□□ -0.35
LIMK1-201ENST00000336180 CXCR3P49682 368 aa12.88□□□□□ -0.35
LIMK1-201ENST00000336180 ERFP50548 548 aa12.88□□□□□ -0.35
LIMK1-201ENST00000336180 SEMA5AQ13591 1074 aa12.88□□□□□ -0.35
LIMK1-201ENST00000336180 HSP90AA5PQ58FG0 334 aa12.88□□□□□ -0.35
LIMK1-201ENST00000336180 RNF135Q8IUD6 432 aa12.88□□□□□ -0.35
LIMK1-201ENST00000336180 SPATA6LQ8N4H0 392 aa12.88□□□□□ -0.35
LIMK1-201ENST00000336180 GSDMBQ8TAX9 411 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms