RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 ADAM32Q8TC27 787 aa12.1□□□□□ -0.47
HDAC6-201ENST00000334136 ABCC13Q9NSE7 274 aa12.1□□□□□ -0.47
HDAC6-201ENST00000334136 GJB6O95452 261 aa12.1□□□□□ -0.47
HDAC6-201ENST00000334136 ENO3P13929 434 aaPredicted RBP12.1□□□□□ -0.47
HDAC6-201ENST00000334136 ACADSP16219 412 aa12.1□□□□□ -0.47
HDAC6-201ENST00000334136 CALB2P22676 271 aa12.1□□□□□ -0.47
HDAC6-201ENST00000334136 PRAMEP78395 509 aa12.1□□□□□ -0.47
HDAC6-201ENST00000334136 UPP1Q16831 310 aa12.1□□□□□ -0.47
HDAC6-201ENST00000334136 CLLU1OSQ5K130 101 aa12.1□□□□□ -0.47
HDAC6-201ENST00000334136 IZUMO2Q6UXV1 221 aa12.1□□□□□ -0.47
HDAC6-201ENST00000334136 LNX1Q8TBB1 728 aaPredicted RBP12.1□□□□□ -0.47
HDAC6-201ENST00000334136 ALKBH8Q96BT7 664 aaKnown RBP12.1□□□□□ -0.47
HDAC6-201ENST00000334136 HNRNPABQ99729 332 aaKnown RBP12.1□□□□□ -0.47
HDAC6-201ENST00000334136 SIX2Q9NPC8 291 aa12.1□□□□□ -0.47
HDAC6-201ENST00000334136 AVENQ9NQS1 362 aaPredicted RBP12.1□□□□□ -0.47
HDAC6-201ENST00000334136 GGA2Q9UJY4 613 aa12.1□□□□□ -0.47
HDAC6-201ENST00000334136 PLXNB2O15031 1838 aa12.1□□□□□ -0.47
HDAC6-201ENST00000334136 RNF103-CHMP3A0A140T963 221 aa12.1□□□□□ -0.47
HDAC6-201ENST00000334136 MAGEA13PA6NCF6 341 aa12.1□□□□□ -0.47
HDAC6-201ENST00000334136 PROSCO94903 275 aa12.1□□□□□ -0.47
HDAC6-201ENST00000334136 HDCP19113 662 aa12.1□□□□□ -0.47
HDAC6-201ENST00000334136 PTPN4P29074 926 aa12.1□□□□□ -0.47
HDAC6-201ENST00000334136 ATP5C1P36542 298 aaKnown RBP12.1□□□□□ -0.47
HDAC6-201ENST00000334136 TBX4P57082 545 aa12.1□□□□□ -0.47
HDAC6-201ENST00000334136 STX1BP61266 288 aa12.1□□□□□ -0.47
HDAC6-201ENST00000334136 HECTD3Q5T447 861 aa12.1□□□□□ -0.47
HDAC6-201ENST00000334136 PRUNE1Q86TP1 453 aa12.1□□□□□ -0.47
HDAC6-201ENST00000334136 KLHL23Q8NBE8 558 aa12.1□□□□□ -0.47
HDAC6-201ENST00000334136 KREMEN2Q8NCW0 462 aa12.1□□□□□ -0.47
HDAC6-201ENST00000334136 STK32AQ8WU08 396 aa12.1□□□□□ -0.47
HDAC6-201ENST00000334136 ATXN2LQ8WWM7 1075 aaKnown RBP12.1□□□□□ -0.47
HDAC6-201ENST00000334136 TOP1MTQ969P6 601 aa12.1□□□□□ -0.47
HDAC6-201ENST00000334136 E2F7Q96AV8 911 aa12.1□□□□□ -0.47
HDAC6-201ENST00000334136 PAAF1Q9BRP4 392 aa12.1□□□□□ -0.47
HDAC6-201ENST00000334136 TTYH3Q9C0H2 523 aa12.1□□□□□ -0.47
HDAC6-201ENST00000334136 SP110Q9HB58 689 aa12.1□□□□□ -0.47
HDAC6-201ENST00000334136 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.1□□□□□ -0.47
HDAC6-201ENST00000334136 NINJ2Q9NZG7 142 aa12.1□□□□□ -0.47
HDAC6-201ENST00000334136 MARCH2Q9P0N8 246 aa12.1□□□□□ -0.47
HDAC6-201ENST00000334136 MCM8Q9UJA3 840 aa12.1□□□□□ -0.47
HDAC6-201ENST00000334136 NR2E1Q9Y466 385 aa12.1□□□□□ -0.47
HDAC6-201ENST00000334136 CES2O00748 559 aa12.09□□□□□ -0.47
HDAC6-201ENST00000334136 APOL1O14791 398 aa12.09□□□□□ -0.47
HDAC6-201ENST00000334136 SEC24DO94855 1032 aaPredicted RBP12.09□□□□□ -0.47
HDAC6-201ENST00000334136 FAM163BP0C2L3 166 aa12.09□□□□□ -0.47
HDAC6-201ENST00000334136 SSTR1P30872 391 aa12.09□□□□□ -0.47
HDAC6-201ENST00000334136 CCR1P32246 355 aa12.09□□□□□ -0.47
HDAC6-201ENST00000334136 DNAL1Q4LDG9 190 aa12.09□□□□□ -0.47
HDAC6-201ENST00000334136 SLFN11Q7Z7L1 901 aa12.09□□□□□ -0.47
HDAC6-201ENST00000334136 RIBC1Q8N443 379 aaPredicted RBP12.09□□□□□ -0.47
HDAC6-201ENST00000334136 POF1BQ8WVV4 589 aa12.09□□□□□ -0.47
HDAC6-201ENST00000334136 TFAP2BQ92481 460 aa12.09□□□□□ -0.47
HDAC6-201ENST00000334136 EXT2Q93063 718 aa12.09□□□□□ -0.47
HDAC6-201ENST00000334136 NMD3Q96D46 503 aaKnown RBP12.09□□□□□ -0.47
HDAC6-201ENST00000334136 SERPINB11Q96P15 392 aa12.09□□□□□ -0.47
HDAC6-201ENST00000334136 CRISPLD2Q9H0B8 497 aa12.09□□□□□ -0.47
HDAC6-201ENST00000334136 CNGB3Q9NQW8 809 aa12.09□□□□□ -0.47
HDAC6-201ENST00000334136 DGKIO75912 1065 aa12.09□□□□□ -0.47
HDAC6-201ENST00000334136 PSEN1P49768 467 aa12.09□□□□□ -0.47
HDAC6-201ENST00000334136 MGAT3Q09327 533 aa12.09□□□□□ -0.47
HDAC6-201ENST00000334136 LAMB3Q13751 1172 aa12.09□□□□□ -0.47
HDAC6-201ENST00000334136 C11orf63Q6NUN7 778 aa12.09□□□□□ -0.47
HDAC6-201ENST00000334136 SMG7Q92540 1137 aaKnown RBP12.09□□□□□ -0.47
HDAC6-201ENST00000334136 CCDC138Q96M89 665 aa12.09□□□□□ -0.47
HDAC6-201ENST00000334136 LHX5Q9H2C1 402 aa12.09□□□□□ -0.47
HDAC6-201ENST00000334136 RNPEPL1Q9HAU8 725 aa12.09□□□□□ -0.47
HDAC6-201ENST00000334136 KLHL8Q9P2G9 620 aaPredicted RBP12.09□□□□□ -0.47
HDAC6-201ENST00000334136 GJB5O95377 273 aa12.09□□□□□ -0.47
HDAC6-201ENST00000334136 GABRR2P28476 465 aa12.09□□□□□ -0.47
HDAC6-201ENST00000334136 NOS2P35228 1153 aa12.09□□□□□ -0.47
HDAC6-201ENST00000334136 RARS2Q5T160 578 aaKnown RBP12.09□□□□□ -0.47
HDAC6-201ENST00000334136 UNC45BQ8IWX7 931 aa12.09□□□□□ -0.47
HDAC6-201ENST00000334136 DNAJC5GQ8N7S2 189 aa12.09□□□□□ -0.47
HDAC6-201ENST00000334136 FBXO36Q8NEA4 188 aa12.09□□□□□ -0.47
HDAC6-201ENST00000334136 GABPB2Q8TAK5 448 aaPredicted RBP12.09□□□□□ -0.47
HDAC6-201ENST00000334136 TBC1D10AQ9BXI6 508 aa12.09□□□□□ -0.47
HDAC6-201ENST00000334136 CATSPERBQ9H7T0 1116 aa12.09□□□□□ -0.47
HDAC6-201ENST00000334136 GTSE1Q9NYZ3 720 aa12.09□□□□□ -0.47
HDAC6-201ENST00000334136 FNDC3AQ9Y2H6 1198 aaKnown RBP12.09□□□□□ -0.47
HDAC6-201ENST00000334136 ARHGAP10A1A4S6 786 aa12.08□□□□□ -0.47
HDAC6-201ENST00000334136 F5H5T6 163 aa12.08□□□□□ -0.47
HDAC6-201ENST00000334136 DFFAO00273 331 aa12.08□□□□□ -0.47
HDAC6-201ENST00000334136 SOD2P04179 222 aa12.08□□□□□ -0.47
HDAC6-201ENST00000334136 ZSCAN5DPP0CG00 497 aa12.08□□□□□ -0.47
HDAC6-201ENST00000334136 BGNP21810 368 aa12.08□□□□□ -0.47
HDAC6-201ENST00000334136 XRCC4Q13426 336 aa12.08□□□□□ -0.47
HDAC6-201ENST00000334136 DAB2IPQ5VWQ8 1189 aa12.08□□□□□ -0.47
HDAC6-201ENST00000334136 DUPD1Q68J44 220 aa12.08□□□□□ -0.47
HDAC6-201ENST00000334136 FAM183BPQ6ZVS7 135 aa12.08□□□□□ -0.47
HDAC6-201ENST00000334136 COLGALT1Q8NBJ5 622 aa12.08□□□□□ -0.47
HDAC6-201ENST00000334136 AGAP3Q96P47 875 aa12.08□□□□□ -0.47
HDAC6-201ENST00000334136 GPR62Q9BZJ7 368 aa12.08□□□□□ -0.47
HDAC6-201ENST00000334136 TLR9Q9NR96 1032 aa12.08□□□□□ -0.47
HDAC6-201ENST00000334136 HMGXB4Q9UGU5 601 aa12.08□□□□□ -0.47
HDAC6-201ENST00000334136 C8AP07357 584 aa12.08□□□□□ -0.48
HDAC6-201ENST00000334136 ADRA1DP25100 572 aa12.08□□□□□ -0.48
HDAC6-201ENST00000334136 WNT7BP56706 349 aa12.08□□□□□ -0.48
HDAC6-201ENST00000334136 NCALDP61601 193 aa12.08□□□□□ -0.48
HDAC6-201ENST00000334136 CENPCQ03188 943 aa12.08□□□□□ -0.48
HDAC6-201ENST00000334136 TAF10Q12962 218 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms