RNA–Protein interactions for RNA: ENST00000331563.6

PKP3-201, Transcript of plakophilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP3, Length 2,809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-201ENST00000331563 C14orf80Q86SX3 495 aa18.57■□□□□ 0.56
PKP3-201ENST00000331563 MAP4K3Q8IVH8 894 aa18.57■□□□□ 0.56
PKP3-201ENST00000331563 LZTR1Q8N653 840 aa18.57■□□□□ 0.56
PKP3-201ENST00000331563 RNF169Q8NCN4 708 aa18.57■□□□□ 0.56
PKP3-201ENST00000331563 ATP2A3Q93084 1043 aa18.57■□□□□ 0.56
PKP3-201ENST00000331563 DNAJC28Q9NX36 388 aa18.57■□□□□ 0.56
PKP3-201ENST00000331563 CNTNAP2Q9UHC6 1331 aa18.57■□□□□ 0.56
PKP3-201ENST00000331563 ZBTB14O43829 449 aa18.56■□□□□ 0.56
PKP3-201ENST00000331563 SERPINE1P05121 402 aa18.56■□□□□ 0.56
PKP3-201ENST00000331563 TKTP29401 623 aaKnown RBP18.56■□□□□ 0.56
PKP3-201ENST00000331563 GABRB2P47870 512 aa18.56■□□□□ 0.56
PKP3-201ENST00000331563 ZBTB17Q13105 803 aa18.56■□□□□ 0.56
PKP3-201ENST00000331563 PPP1R2P3Q6NXS1 205 aa18.56■□□□□ 0.56
PKP3-201ENST00000331563 C16orf89Q6UX73 402 aa18.56■□□□□ 0.56
PKP3-201ENST00000331563 GPR141Q7Z602 305 aa18.56■□□□□ 0.56
PKP3-201ENST00000331563 C10orf107Q8IVU9 208 aa18.56■□□□□ 0.56
PKP3-201ENST00000331563 APBB2Q92870 758 aa18.56■□□□□ 0.56
PKP3-201ENST00000331563 RMND5BQ96G75 393 aaPredicted RBP18.56■□□□□ 0.56
PKP3-201ENST00000331563 ST6GALNAC4Q9H4F1 302 aa18.56■□□□□ 0.56
PKP3-201ENST00000331563 PNPLA8Q9NP80 782 aa18.56■□□□□ 0.56
PKP3-201ENST00000331563 SOBPA7XYQ1 873 aa18.56■□□□□ 0.56
PKP3-201ENST00000331563 K7EPI3 171 aa18.56■□□□□ 0.56
PKP3-201ENST00000331563 TRDMT1O14717 391 aaKnown RBP18.56■□□□□ 0.56
PKP3-201ENST00000331563 IL1R2P27930 398 aa18.56■□□□□ 0.56
PKP3-201ENST00000331563 CCT8P50990 548 aa18.56■□□□□ 0.56
PKP3-201ENST00000331563 NDST2P52849 883 aa18.56■□□□□ 0.56
PKP3-201ENST00000331563 KCNJ11Q14654 390 aa18.56■□□□□ 0.56
PKP3-201ENST00000331563 TDRD10Q5VZ19 366 aaKnown RBP18.56■□□□□ 0.56
PKP3-201ENST00000331563 SLC39A4Q6P5W5 647 aa18.56■□□□□ 0.56
PKP3-201ENST00000331563 SNX32Q86XE0 403 aa18.56■□□□□ 0.56
PKP3-201ENST00000331563 CENPSQ8N2Z9 138 aa18.56■□□□□ 0.56
PKP3-201ENST00000331563 KYQ8NBH2 561 aa18.56■□□□□ 0.56
PKP3-201ENST00000331563 KLC2Q9H0B6 622 aa18.56■□□□□ 0.56
PKP3-201ENST00000331563 DHX33Q9H6R0 707 aaKnown RBP18.56■□□□□ 0.56
PKP3-201ENST00000331563 MKS1Q9NXB0 559 aa18.56■□□□□ 0.56
PKP3-201ENST00000331563 SEPT9Q9UHD8 586 aaPredicted RBP18.56■□□□□ 0.56
PKP3-201ENST00000331563 DICER1Q9UPY3 1922 aaKnown RBP18.55■□□□□ 0.56
PKP3-201ENST00000331563 E2F8A0AVK6 867 aa18.55■□□□□ 0.56
PKP3-201ENST00000331563 CNOT3O75175 753 aaKnown RBP18.55■□□□□ 0.56
PKP3-201ENST00000331563 FGFR3P22607 806 aa18.55■□□□□ 0.56
PKP3-201ENST00000331563 HMOX2P30519 316 aa18.55■□□□□ 0.56
PKP3-201ENST00000331563 C21orf59P57076 290 aa18.55■□□□□ 0.56
PKP3-201ENST00000331563 ACTR2P61160 394 aa18.55■□□□□ 0.56
PKP3-201ENST00000331563 SMAD1Q15797 465 aaKnown RBP18.55■□□□□ 0.56
PKP3-201ENST00000331563 C4orf19Q8IY42 314 aa18.55■□□□□ 0.56
PKP3-201ENST00000331563 ZSCAN18Q8TBC5 510 aaPredicted RBP18.55■□□□□ 0.56
PKP3-201ENST00000331563 ZNF408Q9H9D4 720 aa18.55■□□□□ 0.56
PKP3-201ENST00000331563 POPDC2Q9HBU9 364 aa18.55■□□□□ 0.56
PKP3-201ENST00000331563 APOBEC3GQ9HC16 384 aaKnown RBP18.55■□□□□ 0.56
PKP3-201ENST00000331563 JPH1Q9HDC5 661 aaPredicted RBP18.55■□□□□ 0.56
PKP3-201ENST00000331563 MAP3K20Q9NYL2 800 aaKnown RBP18.55■□□□□ 0.56
PKP3-201ENST00000331563 RNF11Q9Y3C5 154 aa18.55■□□□□ 0.56
PKP3-201ENST00000331563 SQORQ9Y6N5 450 aa18.55■□□□□ 0.56
PKP3-201ENST00000331563 GOLGA8QA0A0J9YX86 632 aa18.55■□□□□ 0.56
PKP3-201ENST00000331563 GOLGA8OA6NCC3 632 aa18.55■□□□□ 0.56
PKP3-201ENST00000331563 GOLGA8NF8WBI6 632 aa18.55■□□□□ 0.56
PKP3-201ENST00000331563 APOC4-APOC2K7ER74 178 aa18.55■□□□□ 0.56
PKP3-201ENST00000331563 APOC2P02655 101 aa18.55■□□□□ 0.56
PKP3-201ENST00000331563 EPHA3P29320 983 aa18.55■□□□□ 0.56
PKP3-201ENST00000331563 RFC1P35251 1148 aaPredicted RBP18.55■□□□□ 0.56
PKP3-201ENST00000331563 KRT76Q01546 638 aa18.55■□□□□ 0.56
PKP3-201ENST00000331563 DCAF6Q58WW2 860 aa18.55■□□□□ 0.56
PKP3-201ENST00000331563 NIPAL1Q6NVV3 410 aa18.55■□□□□ 0.56
PKP3-201ENST00000331563 TICAM1Q8IUC6 712 aa18.55■□□□□ 0.56
PKP3-201ENST00000331563 DSELQ8IZU8 1212 aa18.55■□□□□ 0.56
PKP3-201ENST00000331563 UBR7Q8N806 425 aa18.55■□□□□ 0.56
PKP3-201ENST00000331563 KBTBD7Q8WVZ9 684 aa18.55■□□□□ 0.56
PKP3-201ENST00000331563 BORCS5Q969J3 196 aa18.55■□□□□ 0.56
PKP3-201ENST00000331563 RNPEPQ9H4A4 650 aa18.55■□□□□ 0.56
PKP3-201ENST00000331563 IGSF9Q9P2J2 1179 aa18.55■□□□□ 0.56
PKP3-201ENST00000331563 CSPG5O95196 566 aa18.55■□□□□ 0.56
PKP3-201ENST00000331563 C1QAP02745 245 aa18.55■□□□□ 0.56
PKP3-201ENST00000331563 PTPN1P18031 435 aaKnown RBP18.55■□□□□ 0.56
PKP3-201ENST00000331563 PRKCHP24723 683 aa18.55■□□□□ 0.56
PKP3-201ENST00000331563 ACOT2P49753 483 aa18.55■□□□□ 0.56
PKP3-201ENST00000331563 MTERF2Q49AM1 385 aa18.55■□□□□ 0.56
PKP3-201ENST00000331563 UNC5AQ6ZN44 842 aa18.55■□□□□ 0.56
PKP3-201ENST00000331563 TMEM126BQ8IUX1 230 aa18.55■□□□□ 0.56
PKP3-201ENST00000331563 THNSL1Q8IYQ7 743 aa18.55■□□□□ 0.56
PKP3-201ENST00000331563 PDCD6IPQ8WUM4 868 aaKnown RBP18.55■□□□□ 0.56
PKP3-201ENST00000331563 ANKRD36BP1Q96IX9 119 aa18.55■□□□□ 0.56
PKP3-201ENST00000331563 COG4Q9H9E3 785 aa18.55■□□□□ 0.56
PKP3-201ENST00000331563 TXNRD2Q9NNW7 524 aa18.55■□□□□ 0.56
PKP3-201ENST00000331563 DKK3Q9UBP4 350 aa18.55■□□□□ 0.56
PKP3-201ENST00000331563 PRPF19Q9UMS4 504 aaKnown RBP18.55■□□□□ 0.56
PKP3-201ENST00000331563 HMX2A2RU54 273 aa18.54■□□□□ 0.56
PKP3-201ENST00000331563 FAM47E-STBD1D6RA91 191 aa18.54■□□□□ 0.56
PKP3-201ENST00000331563 GIPC1O14908 333 aa18.54■□□□□ 0.56
PKP3-201ENST00000331563 CHADO15335 359 aa18.54■□□□□ 0.56
PKP3-201ENST00000331563 KCNN4O15554 427 aa18.54■□□□□ 0.56
PKP3-201ENST00000331563 BAIAP3O94812 1187 aa18.54■□□□□ 0.56
PKP3-201ENST00000331563 ZBTB11O95625 1053 aaPredicted RBP18.54■□□□□ 0.56
PKP3-201ENST00000331563 PRAMEP78395 509 aa18.54■□□□□ 0.56
PKP3-201ENST00000331563 PPM1LQ5SGD2 360 aa18.54■□□□□ 0.56
PKP3-201ENST00000331563 OGFOD2Q6N063 350 aa18.54■□□□□ 0.56
PKP3-201ENST00000331563 MYO1HQ8N1T3 1032 aa18.54■□□□□ 0.56
PKP3-201ENST00000331563 TMEM35BQ8NCS4 154 aa18.54■□□□□ 0.56
PKP3-201ENST00000331563 PSMD12O00232 456 aaPredicted RBP18.54■□□□□ 0.56
PKP3-201ENST00000331563 NEMP1O14524 444 aa18.54■□□□□ 0.56
PKP3-201ENST00000331563 LRCH4O75427 683 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms