RNA–Protein interactions for RNA: ENST00000329563.8

TSPO-201, Transcript of translocator protein, humanhuman

APPRIS P1 TSL 3 BASIC

Gene TSPO, Length 955 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPO-201ENST00000329563 GNSP15586 552 aa15.25■□□□□ 0.03
TSPO-201ENST00000329563 DEKP35659 375 aaKnown RBP15.25■□□□□ 0.03
TSPO-201ENST00000329563 COPAP53621 1224 aa15.25■□□□□ 0.03
TSPO-201ENST00000329563 PITX1P78337 314 aaPredicted RBP15.25■□□□□ 0.03
TSPO-201ENST00000329563 KRT83P78385 493 aa15.25■□□□□ 0.03
TSPO-201ENST00000329563 CCZ1BP86790 482 aa15.25■□□□□ 0.03
TSPO-201ENST00000329563 CCZ1P86791 482 aaPredicted RBP15.25■□□□□ 0.03
TSPO-201ENST00000329563 HNRNPDQ14103 355 aaKnown RBP15.25■□□□□ 0.03
TSPO-201ENST00000329563 SPA17Q15506 151 aa15.25■□□□□ 0.03
TSPO-201ENST00000329563 TAF5Q15542 800 aa15.25■□□□□ 0.03
TSPO-201ENST00000329563 SLC18A3Q16572 532 aa15.25■□□□□ 0.03
TSPO-201ENST00000329563 PIK3R6Q5UE93 754 aa15.25■□□□□ 0.03
TSPO-201ENST00000329563 KIAA0907Q7Z7F0 614 aaPredicted RBP15.25■□□□□ 0.03
TSPO-201ENST00000329563 ADIPOR2Q86V24 386 aa15.25■□□□□ 0.03
TSPO-201ENST00000329563 TXLNBQ8N3L3 684 aa15.25■□□□□ 0.03
TSPO-201ENST00000329563 EIF3CQ99613 913 aaKnown RBP15.25■□□□□ 0.03
TSPO-201ENST00000329563 SYT11Q9BT88 431 aa15.25■□□□□ 0.03
TSPO-201ENST00000329563 ADAMTS1Q9UHI8 967 aa15.25■□□□□ 0.03
TSPO-201ENST00000329563 XPO7Q9UIA9 1087 aaKnown RBP15.25■□□□□ 0.03
TSPO-201ENST00000329563 EPN1Q9Y6I3 576 aaPredicted RBP15.25■□□□□ 0.03
TSPO-201ENST00000329563 PCDH15Q96QU1 1955 aa15.25■□□□□ 0.03
TSPO-201ENST00000329563 GIPC1O14908 333 aa15.24■□□□□ 0.03
TSPO-201ENST00000329563 FBXO21O94952 628 aa15.24■□□□□ 0.03
TSPO-201ENST00000329563 NDUFA10O95299 355 aa15.24■□□□□ 0.03
TSPO-201ENST00000329563 LATS1O95835 1130 aa15.24■□□□□ 0.03
TSPO-201ENST00000329563 MMEP08473 750 aa15.24■□□□□ 0.03
TSPO-201ENST00000329563 PLEKP08567 350 aaPredicted RBP15.24■□□□□ 0.03
TSPO-201ENST00000329563 NCAM1P13591 858 aa15.24■□□□□ 0.03
TSPO-201ENST00000329563 HLA-EP13747 358 aa15.24■□□□□ 0.03
TSPO-201ENST00000329563 TBX4P57082 545 aa15.24■□□□□ 0.03
TSPO-201ENST00000329563 SNX16P57768 344 aa15.24■□□□□ 0.03
TSPO-201ENST00000329563 RING1Q06587 406 aa15.24■□□□□ 0.03
TSPO-201ENST00000329563 PTPRNQ16849 979 aa15.24■□□□□ 0.03
TSPO-201ENST00000329563 ASTE1Q2TB18 679 aaPredicted RBP15.24■□□□□ 0.03
TSPO-201ENST00000329563 WDR45BQ5MNZ6 344 aa15.24■□□□□ 0.03
TSPO-201ENST00000329563 UNQ6494/PRO21346Q6UXR6 183 aa15.24■□□□□ 0.03
TSPO-201ENST00000329563 TMEM110Q86TL2 294 aa15.24■□□□□ 0.03
TSPO-201ENST00000329563 TAC4Q86UU9 113 aa15.24■□□□□ 0.03
TSPO-201ENST00000329563 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.24■□□□□ 0.03
TSPO-201ENST00000329563 TMEM35BQ8NCS4 154 aa15.24■□□□□ 0.03
TSPO-201ENST00000329563 DEFB124Q8NES8 71 aa15.24■□□□□ 0.03
TSPO-201ENST00000329563 SLC30A5Q8TAD4 765 aa15.24■□□□□ 0.03
TSPO-201ENST00000329563 TMA16Q96EY4 203 aaKnown RBP15.24■□□□□ 0.03
TSPO-201ENST00000329563 SLC39A13Q96H72 371 aa15.24■□□□□ 0.03
TSPO-201ENST00000329563 LMLNQ96KR4 655 aa15.24■□□□□ 0.03
TSPO-201ENST00000329563 NOX5Q96PH1 765 aa15.24■□□□□ 0.03
TSPO-201ENST00000329563 GTPBP2Q9BX10 602 aaKnown RBP15.24■□□□□ 0.03
TSPO-201ENST00000329563 ADAM33Q9BZ11 813 aa15.24■□□□□ 0.03
TSPO-201ENST00000329563 CIPCQ9C0C6 399 aa15.24■□□□□ 0.03
TSPO-201ENST00000329563 ABCB8Q9NUT2 735 aa15.24■□□□□ 0.03
TSPO-201ENST00000329563 SEPT11Q9NVA2 429 aaKnown RBP15.24■□□□□ 0.03
TSPO-201ENST00000329563 ANKRD11Q6UB99 2663 aaPredicted RBP15.23■□□□□ 0.03
TSPO-201ENST00000329563 CACNA1GO43497 2377 aa15.23■□□□□ 0.03
TSPO-201ENST00000329563 SOWAHDA6NJG2 315 aa15.23■□□□□ 0.03
TSPO-201ENST00000329563 ACSL4O60488 711 aa15.23■□□□□ 0.03
TSPO-201ENST00000329563 LCA5LO95447 670 aa15.23■□□□□ 0.03
TSPO-201ENST00000329563 IGLV3-25P01717 112 aa15.23■□□□□ 0.03
TSPO-201ENST00000329563 CHRNB2P17787 502 aa15.23■□□□□ 0.03
TSPO-201ENST00000329563 CD70P32970 193 aa15.23■□□□□ 0.03
TSPO-201ENST00000329563 FMO1Q01740 532 aa15.23■□□□□ 0.03
TSPO-201ENST00000329563 PDCLQ13371 301 aa15.23■□□□□ 0.03
TSPO-201ENST00000329563 EIF4EBP2Q13542 120 aaPredicted RBP15.23■□□□□ 0.03
TSPO-201ENST00000329563 EIF4HQ15056 248 aaKnown RBP15.23■□□□□ 0.03
TSPO-201ENST00000329563 TAF3Q5VWG9 929 aa15.23■□□□□ 0.03
TSPO-201ENST00000329563 ALKBH5Q6P6C2 394 aaKnown RBP15.23■□□□□ 0.03
TSPO-201ENST00000329563 KIAA1324Q6UXG2 1013 aaKnown RBP15.23■□□□□ 0.03
TSPO-201ENST00000329563 RGL4Q8IZJ4 473 aa15.23■□□□□ 0.03
TSPO-201ENST00000329563 ZNF366Q8N895 744 aa15.23■□□□□ 0.03
TSPO-201ENST00000329563 MSANTD4Q8NCY6 345 aa15.23■□□□□ 0.03
TSPO-201ENST00000329563 STK32AQ8WU08 396 aa15.23■□□□□ 0.03
TSPO-201ENST00000329563 CYB5D2Q8WUJ1 264 aa15.23■□□□□ 0.03
TSPO-201ENST00000329563 SLC20A1Q8WUM9 679 aa15.23■□□□□ 0.03
TSPO-201ENST00000329563 HSPA12BQ96MM6 686 aa15.23■□□□□ 0.03
TSPO-201ENST00000329563 CPXM1Q96SM3 734 aa15.23■□□□□ 0.03
TSPO-201ENST00000329563 TMEM245Q9H330 911 aa15.23■□□□□ 0.03
TSPO-201ENST00000329563 USP36Q9P275 1121 aaKnown RBP15.23■□□□□ 0.03
TSPO-201ENST00000329563 A0A087X0T9 212 aa15.22■□□□□ 0.03
TSPO-201ENST00000329563 H0Y626 953 aa15.22■□□□□ 0.03
TSPO-201ENST00000329563 DDX3XO00571 662 aaKnown RBP eCLIP15.22■□□□□ 0.035e-7■■■■□ 25
TSPO-201ENST00000329563 ARHGAP33O14559 1287 aa15.22■□□□□ 0.03
TSPO-201ENST00000329563 SYNCRIPO60506 623 aaKnown RBP15.22■□□□□ 0.03
TSPO-201ENST00000329563 TBL1XO60907 577 aa15.22■□□□□ 0.03
TSPO-201ENST00000329563 TRIM16O95361 564 aa15.22■□□□□ 0.03
TSPO-201ENST00000329563 CYP1A1P04798 512 aaPredicted RBP15.22■□□□□ 0.03
TSPO-201ENST00000329563 FAM228BP0C875 321 aa15.22■□□□□ 0.03
TSPO-201ENST00000329563 CDH5P33151 784 aaPredicted RBP15.22■□□□□ 0.03
TSPO-201ENST00000329563 RPS24P62847 133 aaKnown RBP15.22■□□□□ 0.03
TSPO-201ENST00000329563 NUGGCQ68CJ6 796 aa15.22■□□□□ 0.03
TSPO-201ENST00000329563 RAD9BQ6WBX8 426 aa15.22■□□□□ 0.03
TSPO-201ENST00000329563 CHST9Q7L1S5 443 aa15.22■□□□□ 0.03
TSPO-201ENST00000329563 METTL3Q86U44 580 aaKnown RBP15.22■□□□□ 0.03
TSPO-201ENST00000329563 CACUL1Q86Y37 369 aa15.22■□□□□ 0.03
TSPO-201ENST00000329563 PASD1Q8IV76 773 aa15.22■□□□□ 0.03
TSPO-201ENST00000329563 AZIN2Q96A70 460 aa15.22■□□□□ 0.03
TSPO-201ENST00000329563 FAM149B1Q96BN6 582 aa15.22■□□□□ 0.03
TSPO-201ENST00000329563 ZNF419Q96HQ0 510 aaPredicted RBP15.22■□□□□ 0.03
TSPO-201ENST00000329563 ZDHHC5Q9C0B5 715 aa15.22■□□□□ 0.03
TSPO-201ENST00000329563 PRDM16Q9HAZ2 1276 aa15.22■□□□□ 0.03
TSPO-201ENST00000329563 CAPN10Q9HC96 672 aa15.22■□□□□ 0.03
TSPO-201ENST00000329563 GGA2Q9UJY4 613 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms