RNA–Protein interactions for RNA: ENST00000328514.11

GINS3-202, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,932 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-202ENST00000328514 QKIQ96PU8 341 aaKnown RBP eCLIP11.53□□□□□ -0.56
GINS3-202ENST00000328514 OR52B2Q96RD2 323 aa11.53□□□□□ -0.56
GINS3-202ENST00000328514 UHRF1Q96T88 793 aaPredicted RBP11.53□□□□□ -0.56
GINS3-202ENST00000328514 GLIS2Q9BZE0 524 aaPredicted RBP11.53□□□□□ -0.56
GINS3-202ENST00000328514 OLAHQ9NV23 265 aa11.53□□□□□ -0.56
GINS3-202ENST00000328514 UTP6Q9NYH9 597 aaKnown RBP11.53□□□□□ -0.56
GINS3-202ENST00000328514 HACD3Q9P035 362 aa11.53□□□□□ -0.56
GINS3-202ENST00000328514 PTBP2Q9UKA9 531 aaKnown RBP11.53□□□□□ -0.56
GINS3-202ENST00000328514 CPSF3Q9UKF6 684 aaKnown RBP11.53□□□□□ -0.56
GINS3-202ENST00000328514 MYRFQ9Y2G1 1151 aa11.53□□□□□ -0.56
GINS3-202ENST00000328514 HEY1Q9Y5J3 304 aa11.53□□□□□ -0.56
GINS3-202ENST00000328514 MAFBQ9Y5Q3 323 aaPredicted RBP11.53□□□□□ -0.56
GINS3-202ENST00000328514 SSC5DA1L4H1 1573 aa11.53□□□□□ -0.56
GINS3-202ENST00000328514 C7orf72A4D263 438 aa11.52□□□□□ -0.56
GINS3-202ENST00000328514 TRIM64A6NGJ6 449 aa11.52□□□□□ -0.56
GINS3-202ENST00000328514 G3V2L1 256 aa11.52□□□□□ -0.56
GINS3-202ENST00000328514 HDAC3O15379 428 aa11.52□□□□□ -0.56
GINS3-202ENST00000328514 MAGEB3O15480 346 aa11.52□□□□□ -0.56
GINS3-202ENST00000328514 RNASEH2AO75792 299 aaKnown RBP11.52□□□□□ -0.56
GINS3-202ENST00000328514 RGS20O76081 388 aa11.52□□□□□ -0.56
GINS3-202ENST00000328514 HSPA4LO95757 839 aa11.52□□□□□ -0.56
GINS3-202ENST00000328514 NR3C2P08235 984 aa11.52□□□□□ -0.56
GINS3-202ENST00000328514 ASNSP08243 561 aa11.52□□□□□ -0.56
GINS3-202ENST00000328514 HOXC6P09630 235 aa11.52□□□□□ -0.56
GINS3-202ENST00000328514 SUPT20HL2P0C7V6 817 aa11.52□□□□□ -0.56
GINS3-202ENST00000328514 ZFXP17010 805 aaPredicted RBP11.52□□□□□ -0.56
GINS3-202ENST00000328514 GP5P40197 560 aa11.52□□□□□ -0.56
GINS3-202ENST00000328514 GARSP41250 739 aaKnown RBP11.52□□□□□ -0.56
GINS3-202ENST00000328514 TNFSF9P41273 254 aa11.52□□□□□ -0.56
GINS3-202ENST00000328514 IKBKEQ14164 716 aa11.52□□□□□ -0.56
GINS3-202ENST00000328514 PPP2R5DQ14738 602 aa11.52□□□□□ -0.56
GINS3-202ENST00000328514 SUPT20HL1Q3ZLR7 823 aa11.52□□□□□ -0.56
GINS3-202ENST00000328514 FAM102AQ5T9C2 384 aaPredicted RBP11.52□□□□□ -0.56
GINS3-202ENST00000328514 GRTP1Q5TC63 336 aa11.52□□□□□ -0.56
GINS3-202ENST00000328514 SH3PXD2AQ5TCZ1 1133 aa11.52□□□□□ -0.56
GINS3-202ENST00000328514 RXFP2Q8WXD0 754 aa11.52□□□□□ -0.56
GINS3-202ENST00000328514 ARNTL2Q8WYA1 636 aa11.52□□□□□ -0.56
GINS3-202ENST00000328514 SGF29Q96ES7 293 aa11.52□□□□□ -0.56
GINS3-202ENST00000328514 KLHL32Q96NJ5 620 aa11.52□□□□□ -0.56
GINS3-202ENST00000328514 CPNE1Q99829 537 aa11.52□□□□□ -0.56
GINS3-202ENST00000328514 NIFKQ9BYG3 293 aaKnown RBP11.52□□□□□ -0.56
GINS3-202ENST00000328514 ANKRD60Q9BZ19 345 aa11.52□□□□□ -0.56
GINS3-202ENST00000328514 WDR41Q9HAD4 459 aa11.52□□□□□ -0.56
GINS3-202ENST00000328514 EFCAB1Q9HAE3 211 aa11.52□□□□□ -0.56
GINS3-202ENST00000328514 RAVER2Q9HCJ3 691 aaKnown RBP11.52□□□□□ -0.56
GINS3-202ENST00000328514 MRPL40Q9NQ50 206 aaKnown RBP11.52□□□□□ -0.56
GINS3-202ENST00000328514 MAN1C1Q9NR34 630 aa11.52□□□□□ -0.56
GINS3-202ENST00000328514 ITGB1BP2Q9UKP3 347 aa11.52□□□□□ -0.56
GINS3-202ENST00000328514 FAF1Q9UNN5 650 aaPredicted RBP11.52□□□□□ -0.56
GINS3-202ENST00000328514 CNTNAP1P78357 1384 aa11.52□□□□□ -0.56
GINS3-202ENST00000328514 WDR90Q96KV7 1748 aa11.52□□□□□ -0.57
GINS3-202ENST00000328514 ARHGEF37A1IGU5 675 aa11.52□□□□□ -0.57
GINS3-202ENST00000328514 WDR27A2RRH5 827 aa11.52□□□□□ -0.57
GINS3-202ENST00000328514 KPNA7A9QM74 516 aa11.52□□□□□ -0.57
GINS3-202ENST00000328514 SLCO1B7G3V0H7 640 aa11.52□□□□□ -0.57
GINS3-202ENST00000328514 OGTO15294 1046 aa11.52□□□□□ -0.57
GINS3-202ENST00000328514 B4GALT4O60513 344 aa11.52□□□□□ -0.57
GINS3-202ENST00000328514 TRIM13O60858 407 aa11.52□□□□□ -0.57
GINS3-202ENST00000328514 MICAL2O94851 1124 aa11.52□□□□□ -0.57
GINS3-202ENST00000328514 HSPA1AP0DMV8 641 aaKnown RBP11.52□□□□□ -0.57
GINS3-202ENST00000328514 HSPA1BP0DMV9 641 aaKnown RBP11.52□□□□□ -0.57
GINS3-202ENST00000328514 PDGFRAP16234 1089 aa11.52□□□□□ -0.57
GINS3-202ENST00000328514 EPHA3P29320 983 aa11.52□□□□□ -0.57
GINS3-202ENST00000328514 TYK2P29597 1187 aa11.52□□□□□ -0.57
GINS3-202ENST00000328514 SERPINB5P36952 375 aa11.52□□□□□ -0.57
GINS3-202ENST00000328514 GRIA1P42261 906 aa11.52□□□□□ -0.57
GINS3-202ENST00000328514 EFNA5P52803 228 aa11.52□□□□□ -0.57
GINS3-202ENST00000328514 PRKAA2P54646 552 aa11.52□□□□□ -0.57
GINS3-202ENST00000328514 PTPN11Q06124 597 aaPredicted RBP11.52□□□□□ -0.57
GINS3-202ENST00000328514 PRKG1Q13976 671 aa11.52□□□□□ -0.57
GINS3-202ENST00000328514 KCTD21Q4G0X4 260 aa11.52□□□□□ -0.57
GINS3-202ENST00000328514 PDCD4Q53EL6 469 aaKnown RBP11.52□□□□□ -0.57
GINS3-202ENST00000328514 FKBP1CQ5VVH2 108 aa11.52□□□□□ -0.57
GINS3-202ENST00000328514 ELMSAN1Q6PJG2 1045 aa11.52□□□□□ -0.57
GINS3-202ENST00000328514 NAPRTQ6XQN6 538 aa11.52□□□□□ -0.57
GINS3-202ENST00000328514 UNC5BQ8IZJ1 945 aa11.52□□□□□ -0.57
GINS3-202ENST00000328514 CPXCR1Q8N123 301 aa11.52□□□□□ -0.57
GINS3-202ENST00000328514 GALNT4Q8N4A0 578 aa11.52□□□□□ -0.57
GINS3-202ENST00000328514 TDRD5Q8NAT2 981 aaKnown RBP11.52□□□□□ -0.57
GINS3-202ENST00000328514 ASB9Q96DX5 294 aa11.52□□□□□ -0.57
GINS3-202ENST00000328514 ACO2Q99798 780 aaKnown RBP11.52□□□□□ -0.57
GINS3-202ENST00000328514 ILKAPQ9H0C8 392 aaPredicted RBP11.52□□□□□ -0.57
GINS3-202ENST00000328514 RNPEPQ9H4A4 650 aa11.52□□□□□ -0.57
GINS3-202ENST00000328514 SNX15Q9NRS6 342 aa11.52□□□□□ -0.57
GINS3-202ENST00000328514 SUCOQ9UBS9 1254 aaKnown RBP11.52□□□□□ -0.57
GINS3-202ENST00000328514 VTI1BQ9UEU0 232 aa11.52□□□□□ -0.57
GINS3-202ENST00000328514 TUBGCP4Q9UGJ1 667 aa11.52□□□□□ -0.57
GINS3-202ENST00000328514 SLC8A2Q9UPR5 921 aa11.52□□□□□ -0.57
GINS3-202ENST00000328514 RAP2CQ9Y3L5 183 aa11.52□□□□□ -0.57
GINS3-202ENST00000328514 PSAT1Q9Y617 370 aa11.52□□□□□ -0.57
GINS3-202ENST00000328514 TRIM64BA6NI03 449 aa11.51□□□□□ -0.57
GINS3-202ENST00000328514 TRIM38O00635 465 aa11.51□□□□□ -0.57
GINS3-202ENST00000328514 MSCO60682 206 aa11.51□□□□□ -0.57
GINS3-202ENST00000328514 OATP04181 439 aa11.51□□□□□ -0.57
GINS3-202ENST00000328514 ZNF12P17014 697 aa11.51□□□□□ -0.57
GINS3-202ENST00000328514 DPP6P42658 865 aa11.51□□□□□ -0.57
GINS3-202ENST00000328514 MAGEA10P43363 369 aaPredicted RBP11.51□□□□□ -0.57
GINS3-202ENST00000328514 PFKPQ01813 784 aa11.51□□□□□ -0.57
GINS3-202ENST00000328514 MTA1Q13330 715 aa11.51□□□□□ -0.57
GINS3-202ENST00000328514 PDK1Q15118 436 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms