RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 ARID3BQ8IVW6 561 aaPredicted RBP11.66□□□□□ -0.54
COL4A5-201ENST00000328300 CEP19Q96LK0 163 aa11.66□□□□□ -0.54
COL4A5-201ENST00000328300 ANKZF1Q9H8Y5 726 aa11.66□□□□□ -0.54
COL4A5-201ENST00000328300 COMMD8Q9NX08 183 aa11.66□□□□□ -0.54
COL4A5-201ENST00000328300 CCDC78A2IDD5 438 aa11.66□□□□□ -0.54
COL4A5-201ENST00000328300 LIASO43766 372 aa11.66□□□□□ -0.54
COL4A5-201ENST00000328300 CILPO75339 1184 aa11.66□□□□□ -0.54
COL4A5-201ENST00000328300 LCA5LO95447 670 aa11.66□□□□□ -0.54
COL4A5-201ENST00000328300 MAPK9P45984 424 aa11.66□□□□□ -0.54
COL4A5-201ENST00000328300 EEF1DP3Q658K8 133 aa11.66□□□□□ -0.54
COL4A5-201ENST00000328300 C16orf87Q6PH81 154 aa11.66□□□□□ -0.54
COL4A5-201ENST00000328300 POP5Q969H6 163 aaKnown RBP11.66□□□□□ -0.54
COL4A5-201ENST00000328300 TMEM159Q96B96 161 aa11.66□□□□□ -0.54
COL4A5-201ENST00000328300 NLNQ9BYT8 704 aa11.66□□□□□ -0.54
COL4A5-201ENST00000328300 COPS7BQ9H9Q2 264 aaPredicted RBP11.66□□□□□ -0.54
COL4A5-201ENST00000328300 TMEM114B3SHH9 223 aa11.65□□□□□ -0.54
COL4A5-201ENST00000328300 BMP6P22004 513 aa11.65□□□□□ -0.54
COL4A5-201ENST00000328300 NKAPQ8N5F7 415 aaKnown RBP11.65□□□□□ -0.54
COL4A5-201ENST00000328300 SH3GL3Q99963 347 aa11.65□□□□□ -0.54
COL4A5-201ENST00000328300 PDZD7Q9H5P4 517 aa11.65□□□□□ -0.54
COL4A5-201ENST00000328300 NINJ2Q9NZG7 142 aa11.65□□□□□ -0.54
COL4A5-201ENST00000328300 SMIM22K7EJ46 135 aa11.65□□□□□ -0.54
COL4A5-201ENST00000328300 LGR5O75473 907 aa11.65□□□□□ -0.54
COL4A5-201ENST00000328300 PECAM1P16284 738 aaPredicted RBP11.65□□□□□ -0.54
COL4A5-201ENST00000328300 RPL21P46778 160 aaKnown RBP11.65□□□□□ -0.54
COL4A5-201ENST00000328300 STX19Q8N4C7 294 aa11.65□□□□□ -0.54
COL4A5-201ENST00000328300 FAM162AQ96A26 154 aa11.65□□□□□ -0.54
COL4A5-201ENST00000328300 CAPNS2Q96L46 248 aa11.65□□□□□ -0.54
COL4A5-201ENST00000328300 NEUROG2Q9H2A3 272 aa11.65□□□□□ -0.54
COL4A5-201ENST00000328300 NRDE2Q9H7Z3 1164 aa11.65□□□□□ -0.54
COL4A5-201ENST00000328300 C1QTNF3-AMACRE9PGA6 284 aa11.65□□□□□ -0.54
COL4A5-201ENST00000328300 TSPAN1O60635 241 aa11.65□□□□□ -0.54
COL4A5-201ENST00000328300 MBTD1Q05BQ5 628 aa11.65□□□□□ -0.54
COL4A5-201ENST00000328300 SLC25A52Q3SY17 297 aa11.65□□□□□ -0.54
COL4A5-201ENST00000328300 RFX8Q6ZV50 586 aa11.65□□□□□ -0.54
COL4A5-201ENST00000328300 TTC30BQ8N4P2 665 aa11.65□□□□□ -0.54
COL4A5-201ENST00000328300 MCOLN3Q8TDD5 553 aa11.65□□□□□ -0.54
COL4A5-201ENST00000328300 TBC1D14Q9P2M4 693 aa11.65□□□□□ -0.54
COL4A5-201ENST00000328300 ZNF214Q9UL59 606 aaPredicted RBP11.65□□□□□ -0.54
COL4A5-201ENST00000328300 SMIM28A0A1B0GU29 152 aa11.65□□□□□ -0.54
COL4A5-201ENST00000328300 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.65□□□□□ -0.54
COL4A5-201ENST00000328300 SOWAHBA6NEL2 793 aa11.65□□□□□ -0.54
COL4A5-201ENST00000328300 RASSF10A6NK89 507 aa11.65□□□□□ -0.54
COL4A5-201ENST00000328300 B2RBV5 119 aa11.65□□□□□ -0.54
COL4A5-201ENST00000328300 KATNA1O75449 491 aa11.65□□□□□ -0.54
COL4A5-201ENST00000328300 TNFSF9P41273 254 aa11.65□□□□□ -0.54
COL4A5-201ENST00000328300 PRAMEF19Q5SWL8 479 aa11.65□□□□□ -0.54
COL4A5-201ENST00000328300 LRRC8DQ7L1W4 858 aa11.65□□□□□ -0.54
COL4A5-201ENST00000328300 GLT6D1Q7Z4J2 308 aa11.65□□□□□ -0.54
COL4A5-201ENST00000328300 IRF2BP2Q7Z5L9 587 aa11.65□□□□□ -0.54
COL4A5-201ENST00000328300 FAM95CA0A1B0GW59 222 aa11.65□□□□□ -0.55
COL4A5-201ENST00000328300 TISP43B9A030 160 aa11.65□□□□□ -0.55
COL4A5-201ENST00000328300 DGKAP23743 735 aa11.65□□□□□ -0.55
COL4A5-201ENST00000328300 CLCN5P51795 746 aa11.65□□□□□ -0.55
COL4A5-201ENST00000328300 CYLC2Q14093 348 aaPredicted RBP11.65□□□□□ -0.55
COL4A5-201ENST00000328300 AFTPHQ6ULP2 937 aa11.65□□□□□ -0.55
COL4A5-201ENST00000328300 OR5B17Q8NGF7 314 aa11.65□□□□□ -0.55
COL4A5-201ENST00000328300 OR56A4Q8NGH8 313 aa11.65□□□□□ -0.55
COL4A5-201ENST00000328300 AGR3Q8TD06 166 aa11.65□□□□□ -0.55
COL4A5-201ENST00000328300 SUSD6Q92537 303 aa11.65□□□□□ -0.55
COL4A5-201ENST00000328300 VPS45Q9NRW7 570 aa11.65□□□□□ -0.55
COL4A5-201ENST00000328300 TSR3Q9UJK0 312 aaKnown RBP11.65□□□□□ -0.55
COL4A5-201ENST00000328300 C4BPAP04003 597 aaKnown RBP11.64□□□□□ -0.55
COL4A5-201ENST00000328300 SERPIND1P05546 499 aa11.64□□□□□ -0.55
COL4A5-201ENST00000328300 ENO3P13929 434 aaPredicted RBP11.64□□□□□ -0.55
COL4A5-201ENST00000328300 CALB2P22676 271 aa11.64□□□□□ -0.55
COL4A5-201ENST00000328300 RAD23BP54727 409 aa11.64□□□□□ -0.55
COL4A5-201ENST00000328300 ECM1Q16610 540 aa11.64□□□□□ -0.55
COL4A5-201ENST00000328300 HSDL1Q3SXM5 330 aa11.64□□□□□ -0.55
COL4A5-201ENST00000328300 ZBTB41Q5SVQ8 909 aa11.64□□□□□ -0.55
COL4A5-201ENST00000328300 PLEKHA7Q6IQ23 1121 aa11.64□□□□□ -0.55
COL4A5-201ENST00000328300 LRRC8BQ6P9F7 803 aa11.64□□□□□ -0.55
COL4A5-201ENST00000328300 MOB2Q70IA6 237 aa11.64□□□□□ -0.55
COL4A5-201ENST00000328300 PHC3Q8NDX5 983 aa11.64□□□□□ -0.55
COL4A5-201ENST00000328300 NLGN2Q8NFZ4 835 aa11.64□□□□□ -0.55
COL4A5-201ENST00000328300 RDH11Q8TC12 318 aa11.64□□□□□ -0.55
COL4A5-201ENST00000328300 ATL1Q8WXF7 558 aa11.64□□□□□ -0.55
COL4A5-201ENST00000328300 JADE3Q92613 823 aa11.64□□□□□ -0.55
COL4A5-201ENST00000328300 KLF6Q99612 283 aaPredicted RBP11.64□□□□□ -0.55
COL4A5-201ENST00000328300 C17orf80Q9BSJ5 609 aa11.64□□□□□ -0.55
COL4A5-201ENST00000328300 SNRNP25Q9BV90 132 aaKnown RBP11.64□□□□□ -0.55
COL4A5-201ENST00000328300 HIPK3Q9H422 1215 aa11.64□□□□□ -0.55
COL4A5-201ENST00000328300 hCG_1818297A0A087WSY0 165 aa11.64□□□□□ -0.55
COL4A5-201ENST00000328300 F8VP50 259 aa11.64□□□□□ -0.55
COL4A5-201ENST00000328300 TRIM13O60858 407 aa11.64□□□□□ -0.55
COL4A5-201ENST00000328300 CTNNB1P35222 781 aa11.64□□□□□ -0.55
COL4A5-201ENST00000328300 PHKG1Q16816 387 aa11.64□□□□□ -0.55
COL4A5-201ENST00000328300 UBE2E3Q969T4 207 aa11.64□□□□□ -0.55
COL4A5-201ENST00000328300 TUBGCP3Q96CW5 907 aa11.64□□□□□ -0.55
COL4A5-201ENST00000328300 SNX27Q96L92 541 aa11.64□□□□□ -0.55
COL4A5-201ENST00000328300 ACBD6Q9BR61 282 aa11.64□□□□□ -0.55
COL4A5-201ENST00000328300 NFKBIZQ9BYH8 718 aa11.64□□□□□ -0.55
COL4A5-201ENST00000328300 DMGDHQ9UI17 866 aaKnown RBP11.64□□□□□ -0.55
COL4A5-201ENST00000328300 RIPK3Q9Y572 518 aa11.64□□□□□ -0.55
COL4A5-201ENST00000328300 PDE2AO00408 941 aaPredicted RBP11.64□□□□□ -0.55
COL4A5-201ENST00000328300 WARSP23381 471 aaKnown RBP11.64□□□□□ -0.55
COL4A5-201ENST00000328300 RANBP1P43487 201 aa11.64□□□□□ -0.55
COL4A5-201ENST00000328300 POLD2P49005 469 aa11.64□□□□□ -0.55
COL4A5-201ENST00000328300 IRF5Q13568 498 aa11.64□□□□□ -0.55
COL4A5-201ENST00000328300 FAM46CQ5VWP2 391 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms