RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 MSS51Q4VC12 460 aa15.6■□□□□ 0.09
VARS2-201ENST00000321897 PATL1Q86TB9 770 aaKnown RBP15.6■□□□□ 0.09
VARS2-201ENST00000321897 CNDP1Q96KN2 507 aa15.6■□□□□ 0.09
VARS2-201ENST00000321897 TMEM134Q9H6X4 195 aa15.6■□□□□ 0.09
VARS2-201ENST00000321897 PPM1HQ9ULR3 514 aa15.6■□□□□ 0.09
VARS2-201ENST00000321897 SYCE1LA8MT33 242 aa15.59■□□□□ 0.09
VARS2-201ENST00000321897 ARL2P36404 184 aa15.59■□□□□ 0.09
VARS2-201ENST00000321897 CDK7P50613 346 aa15.59■□□□□ 0.09
VARS2-201ENST00000321897 PDK2Q15119 407 aa15.59■□□□□ 0.09
VARS2-201ENST00000321897 HEATR4Q86WZ0 1026 aa15.59■□□□□ 0.09
VARS2-201ENST00000321897 AZIN2Q96A70 460 aa15.59■□□□□ 0.09
VARS2-201ENST00000321897 DNAAF2Q9NVR5 837 aaKnown RBP15.59■□□□□ 0.09
VARS2-201ENST00000321897 HACD3Q9P035 362 aa15.59■□□□□ 0.09
VARS2-201ENST00000321897 COQ4Q9Y3A0 265 aa15.59■□□□□ 0.09
VARS2-201ENST00000321897 CNTNAP2Q9UHC6 1331 aa15.59■□□□□ 0.09
VARS2-201ENST00000321897 TPP1O14773 563 aa15.59■□□□□ 0.09
VARS2-201ENST00000321897 SUPT7LO94864 414 aa15.59■□□□□ 0.09
VARS2-201ENST00000321897 VCLP18206 1134 aa15.59■□□□□ 0.09
VARS2-201ENST00000321897 LMO2P25791 158 aa15.59■□□□□ 0.09
VARS2-201ENST00000321897 RPL5P46777 297 aaKnown RBP15.59■□□□□ 0.09
VARS2-201ENST00000321897 CCDC142Q17RM4 750 aa15.59■□□□□ 0.09
VARS2-201ENST00000321897 CDCA2Q69YH5 1023 aaPredicted RBP15.59■□□□□ 0.09
VARS2-201ENST00000321897 TAS2R42Q7RTR8 314 aa15.59■□□□□ 0.09
VARS2-201ENST00000321897 XYLT1Q86Y38 959 aa15.59■□□□□ 0.09
VARS2-201ENST00000321897 STKLD1Q8NE28 680 aa15.59■□□□□ 0.09
VARS2-201ENST00000321897 C10orf82Q8WW14 230 aa15.59■□□□□ 0.09
VARS2-201ENST00000321897 SPATA16Q9BXB7 569 aa15.59■□□□□ 0.09
VARS2-201ENST00000321897 MROH8Q9H579 483 aa15.59■□□□□ 0.09
VARS2-201ENST00000321897 PPCSQ9HAB8 311 aa15.59■□□□□ 0.09
VARS2-201ENST00000321897 LRRC42Q9Y546 428 aa15.59■□□□□ 0.09
VARS2-201ENST00000321897 ACTL7BQ9Y614 415 aa15.59■□□□□ 0.09
VARS2-201ENST00000321897 ALOX15BO15296 676 aa15.59■□□□□ 0.09
VARS2-201ENST00000321897 TNFAIP8O95379 198 aa15.59■□□□□ 0.09
VARS2-201ENST00000321897 CYP1A1P04798 512 aaPredicted RBP15.59■□□□□ 0.09
VARS2-201ENST00000321897 CPA3P15088 417 aa15.59■□□□□ 0.09
VARS2-201ENST00000321897 NDUFV1P49821 464 aa15.59■□□□□ 0.09
VARS2-201ENST00000321897 DAB2P98082 770 aa15.59■□□□□ 0.09
VARS2-201ENST00000321897 ZNF235Q14590 738 aa15.59■□□□□ 0.09
VARS2-201ENST00000321897 GSTA3Q16772 222 aa15.59■□□□□ 0.09
VARS2-201ENST00000321897 VWA5B1Q5TIE3 1220 aa15.59■□□□□ 0.09
VARS2-201ENST00000321897 SLC4A11Q8NBS3 891 aa15.59■□□□□ 0.09
VARS2-201ENST00000321897 ASB7Q9H672 318 aa15.59■□□□□ 0.09
VARS2-201ENST00000321897 NRDE2Q9H7Z3 1164 aa15.59■□□□□ 0.09
VARS2-201ENST00000321897 MYO7AQ13402 2215 aa15.59■□□□□ 0.09
VARS2-201ENST00000321897 ATRNL1Q5VV63 1379 aa15.59■□□□□ 0.09
VARS2-201ENST00000321897 ADCY6O43306 1168 aa15.58■□□□□ 0.09
VARS2-201ENST00000321897 GMPRP36959 345 aa15.58■□□□□ 0.09
VARS2-201ENST00000321897 SCNN1GP51170 649 aa15.58■□□□□ 0.09
VARS2-201ENST00000321897 MPP3Q13368 585 aa15.58■□□□□ 0.09
VARS2-201ENST00000321897 SLC27A1Q6PCB7 646 aa15.58■□□□□ 0.09
VARS2-201ENST00000321897 RAB44Q7Z6P3 723 aaPredicted RBP15.58■□□□□ 0.09
VARS2-201ENST00000321897 NR1H4Q96RI1 486 aaPredicted RBP15.58■□□□□ 0.09
VARS2-201ENST00000321897 FAM96AQ9H5X1 160 aa15.58■□□□□ 0.09
VARS2-201ENST00000321897 VANGL2Q9ULK5 521 aa15.58■□□□□ 0.09
VARS2-201ENST00000321897 TNFSF13BQ9Y275 285 aa15.58■□□□□ 0.09
VARS2-201ENST00000321897 MYOCOSA0A1B0GUC4 107 aa15.58■□□□□ 0.08
VARS2-201ENST00000321897 SLC1A6P48664 564 aa15.58■□□□□ 0.08
VARS2-201ENST00000321897 ZBTB49Q6ZSB9 765 aa15.58■□□□□ 0.08
VARS2-201ENST00000321897 TTC39CQ8N584 583 aa15.58■□□□□ 0.08
VARS2-201ENST00000321897 PCDH20Q8N6Y1 951 aaKnown RBP15.58■□□□□ 0.08
VARS2-201ENST00000321897 GIPC3Q8TF64 312 aa15.58■□□□□ 0.08
VARS2-201ENST00000321897 NTPCRQ9BSD7 190 aaKnown RBP15.58■□□□□ 0.08
VARS2-201ENST00000321897 FICDQ9BVA6 458 aa15.58■□□□□ 0.08
VARS2-201ENST00000321897 CYP3A43Q9HB55 503 aa15.58■□□□□ 0.08
VARS2-201ENST00000321897 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.58■□□□□ 0.08
VARS2-201ENST00000321897 ZNF180Q9UJW8 692 aa15.58■□□□□ 0.08
VARS2-201ENST00000321897 A0A096LPK6 155 aa15.58■□□□□ 0.08
VARS2-201ENST00000321897 ABLIM1O14639 778 aa15.58■□□□□ 0.08
VARS2-201ENST00000321897 MGAT5Q09328 741 aa15.58■□□□□ 0.08
VARS2-201ENST00000321897 PDAP1Q13442 181 aaKnown RBP15.58■□□□□ 0.08
VARS2-201ENST00000321897 SLC10A6Q3KNW5 377 aa15.58■□□□□ 0.08
VARS2-201ENST00000321897 C16orf89Q6UX73 402 aa15.58■□□□□ 0.08
VARS2-201ENST00000321897 AMIGO2Q86SJ2 522 aa15.58■□□□□ 0.08
VARS2-201ENST00000321897 DDX1Q92499 740 aaKnown RBP15.58■□□□□ 0.08
VARS2-201ENST00000321897 PRR11Q96HE9 360 aaPredicted RBP15.58■□□□□ 0.08
VARS2-201ENST00000321897 GMLQ99445 158 aa15.58■□□□□ 0.08
VARS2-201ENST00000321897 ACSS3Q9H6R3 686 aa15.58■□□□□ 0.08
VARS2-201ENST00000321897 PCDH18Q9HCL0 1135 aa15.58■□□□□ 0.08
VARS2-201ENST00000321897 SYNPO2Q9UMS6 1093 aa15.58■□□□□ 0.08
VARS2-201ENST00000321897 AP4B1Q9Y6B7 739 aa15.58■□□□□ 0.08
VARS2-201ENST00000321897 MSCO60682 206 aa15.58■□□□□ 0.08
VARS2-201ENST00000321897 E2F6O75461 281 aa15.58■□□□□ 0.08
VARS2-201ENST00000321897 TADA2AO75478 443 aa15.58■□□□□ 0.08
VARS2-201ENST00000321897 SERPINB9P50453 376 aa15.58■□□□□ 0.08
VARS2-201ENST00000321897 NAGLUP54802 743 aa15.58■□□□□ 0.08
VARS2-201ENST00000321897 EFEMP1Q12805 493 aa15.58■□□□□ 0.08
VARS2-201ENST00000321897 TMEM109Q9BVC6 243 aa15.58■□□□□ 0.08
VARS2-201ENST00000321897 RRN3Q9NYV6 651 aa15.58■□□□□ 0.08
VARS2-201ENST00000321897 MAFBQ9Y5Q3 323 aaPredicted RBP15.58■□□□□ 0.08
VARS2-201ENST00000321897 SPAG6O75602 509 aa15.57■□□□□ 0.08
VARS2-201ENST00000321897 ITGAVP06756 1048 aa15.57■□□□□ 0.08
VARS2-201ENST00000321897 OCM2P0CE71 109 aa15.57■□□□□ 0.08
VARS2-201ENST00000321897 OCMP0CE72 109 aaPredicted RBP15.57■□□□□ 0.08
VARS2-201ENST00000321897 YBX3P16989 372 aaKnown RBP eCLIP15.57■□□□□ 0.08
VARS2-201ENST00000321897 PAMP19021 973 aa15.57■□□□□ 0.08
VARS2-201ENST00000321897 NOVP48745 357 aa15.57■□□□□ 0.08
VARS2-201ENST00000321897 PGGT1BP53609 377 aa15.57■□□□□ 0.08
VARS2-201ENST00000321897 MAXP61244 160 aa15.57■□□□□ 0.08
VARS2-201ENST00000321897 ACVR2BQ13705 512 aa15.57■□□□□ 0.08
VARS2-201ENST00000321897 NET1Q7Z628 596 aaPredicted RBP15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms