RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 MAGEB16A2A368 324 aa13.02□□□□□ -0.32
DNMT3A-202ENST00000321117 ASB14A6NK59 587 aa13.02□□□□□ -0.32
DNMT3A-202ENST00000321117 E7ESA3 106 aa13.02□□□□□ -0.32
DNMT3A-202ENST00000321117 PEX1O43933 1283 aa13.02□□□□□ -0.32
DNMT3A-202ENST00000321117 GFAPP14136 432 aa13.02□□□□□ -0.32
DNMT3A-202ENST00000321117 SOX11P35716 441 aa13.02□□□□□ -0.32
DNMT3A-202ENST00000321117 KCNJ11Q14654 390 aa13.02□□□□□ -0.32
DNMT3A-202ENST00000321117 TMEM132BQ14DG7 1078 aa13.02□□□□□ -0.32
DNMT3A-202ENST00000321117 PPM1JQ5JR12 505 aa13.02□□□□□ -0.32
DNMT3A-202ENST00000321117 C15orf39Q6ZRI6 1047 aa13.02□□□□□ -0.32
DNMT3A-202ENST00000321117 NUP93Q8N1F7 819 aa13.02□□□□□ -0.32
DNMT3A-202ENST00000321117 RP9Q8TA86 221 aaKnown RBP13.02□□□□□ -0.32
DNMT3A-202ENST00000321117 LENG1Q96BZ8 264 aaPredicted RBP13.02□□□□□ -0.32
DNMT3A-202ENST00000321117 WNK4Q96J92 1243 aa13.02□□□□□ -0.32
DNMT3A-202ENST00000321117 BTBD9Q96Q07 612 aa13.02□□□□□ -0.32
DNMT3A-202ENST00000321117 ACE2Q9BYF1 805 aaPredicted RBP13.02□□□□□ -0.32
DNMT3A-202ENST00000321117 MRPS26Q9BYN8 205 aaKnown RBP13.02□□□□□ -0.32
DNMT3A-202ENST00000321117 TLE6Q9H808 572 aa13.02□□□□□ -0.32
DNMT3A-202ENST00000321117 DNAJC28Q9NX36 388 aa13.02□□□□□ -0.32
DNMT3A-202ENST00000321117 PIN4Q9Y237 131 aaKnown RBP13.02□□□□□ -0.32
DNMT3A-202ENST00000321117 MYRFQ9Y2G1 1151 aa13.02□□□□□ -0.32
DNMT3A-202ENST00000321117 FNDC3AQ9Y2H6 1198 aaKnown RBP13.02□□□□□ -0.32
DNMT3A-202ENST00000321117 YDJCA8MPS7 323 aa13.02□□□□□ -0.32
DNMT3A-202ENST00000321117 UBDO15205 165 aa13.02□□□□□ -0.32
DNMT3A-202ENST00000321117 CILPO75339 1184 aa13.02□□□□□ -0.32
DNMT3A-202ENST00000321117 PMPCBO75439 489 aa13.02□□□□□ -0.32
DNMT3A-202ENST00000321117 MT-CO1P00395 513 aa13.02□□□□□ -0.32
DNMT3A-202ENST00000321117 PGK2P07205 417 aa13.02□□□□□ -0.32
DNMT3A-202ENST00000321117 GOT1P17174 413 aa13.02□□□□□ -0.32
DNMT3A-202ENST00000321117 INSCQ1MX18 579 aa13.02□□□□□ -0.32
DNMT3A-202ENST00000321117 ACBD5Q5T8D3 534 aaPredicted RBP13.02□□□□□ -0.32
DNMT3A-202ENST00000321117 SH3PXD2AQ5TCZ1 1133 aa13.02□□□□□ -0.32
DNMT3A-202ENST00000321117 CYP2R1Q6VVX0 501 aa13.02□□□□□ -0.32
DNMT3A-202ENST00000321117 PCDH20Q8N6Y1 951 aaKnown RBP13.02□□□□□ -0.32
DNMT3A-202ENST00000321117 MARK4Q96L34 752 aa13.02□□□□□ -0.32
DNMT3A-202ENST00000321117 PRDM12Q9H4Q4 367 aa13.02□□□□□ -0.32
DNMT3A-202ENST00000321117 WDR55Q9H6Y2 383 aaPredicted RBP13.02□□□□□ -0.32
DNMT3A-202ENST00000321117 POPDC2Q9HBU9 364 aa13.02□□□□□ -0.32
DNMT3A-202ENST00000321117 SYBUQ9NX95 663 aa13.02□□□□□ -0.32
DNMT3A-202ENST00000321117 KIAA1551Q9HCM1 1747 aa13.02□□□□□ -0.33
DNMT3A-202ENST00000321117 CCDC189A1A4V9 331 aa13.02□□□□□ -0.33
DNMT3A-202ENST00000321117 KLRG2A4D1S0 409 aaPredicted RBP13.02□□□□□ -0.33
DNMT3A-202ENST00000321117 SUPT7LO94864 414 aa13.02□□□□□ -0.33
DNMT3A-202ENST00000321117 MOCS2O96007 188 aaPredicted RBP13.02□□□□□ -0.33
DNMT3A-202ENST00000321117 PIGRP01833 764 aa13.02□□□□□ -0.33
DNMT3A-202ENST00000321117 GJB1P08034 283 aa13.02□□□□□ -0.33
DNMT3A-202ENST00000321117 ZNF484Q5JVG2 852 aa13.02□□□□□ -0.33
DNMT3A-202ENST00000321117 CXorf38Q8TB03 319 aa13.02□□□□□ -0.33
DNMT3A-202ENST00000321117 APBA2Q99767 749 aa13.02□□□□□ -0.33
DNMT3A-202ENST00000321117 BAG5Q9UL15 447 aa13.02□□□□□ -0.33
DNMT3A-202ENST00000321117 UBQLN1Q9UMX0 589 aaKnown RBP13.02□□□□□ -0.33
DNMT3A-202ENST00000321117 RREB1Q92766 1687 aa13.02□□□□□ -0.33
DNMT3A-202ENST00000321117 TMEM114B3SHH9 223 aa13.02□□□□□ -0.33
DNMT3A-202ENST00000321117 HNRNPRO43390 633 aaKnown RBP13.02□□□□□ -0.33
DNMT3A-202ENST00000321117 IDH3AP50213 366 aa13.02□□□□□ -0.33
DNMT3A-202ENST00000321117 TMEM63BQ5T3F8 832 aa13.02□□□□□ -0.33
DNMT3A-202ENST00000321117 AGAP9Q5VTM2 703 aa13.02□□□□□ -0.33
DNMT3A-202ENST00000321117 FBXO16Q8IX29 292 aaPredicted RBP13.02□□□□□ -0.33
DNMT3A-202ENST00000321117 NETO2Q8NC67 525 aa13.02□□□□□ -0.33
DNMT3A-202ENST00000321117 RIN3Q8TB24 985 aa13.02□□□□□ -0.33
DNMT3A-202ENST00000321117 SLC4A5Q9BY07 1137 aa13.02□□□□□ -0.33
DNMT3A-202ENST00000321117 ZNF408Q9H9D4 720 aa13.02□□□□□ -0.33
DNMT3A-202ENST00000321117 RAP2CQ9Y3L5 183 aa13.02□□□□□ -0.33
DNMT3A-202ENST00000321117 SNX5Q9Y5X3 404 aa13.02□□□□□ -0.33
DNMT3A-202ENST00000321117 CNTNAP2Q9UHC6 1331 aa13.02□□□□□ -0.33
DNMT3A-202ENST00000321117 C2CD4BA6NLJ0 364 aa13.01□□□□□ -0.33
DNMT3A-202ENST00000321117 INSRRP14616 1297 aa13.01□□□□□ -0.33
DNMT3A-202ENST00000321117 GCAP28676 217 aa13.01□□□□□ -0.33
DNMT3A-202ENST00000321117 PPARGP37231 505 aaPredicted RBP13.01□□□□□ -0.33
DNMT3A-202ENST00000321117 TAF6P49848 677 aa13.01□□□□□ -0.33
DNMT3A-202ENST00000321117 NUP107P57740 925 aa13.01□□□□□ -0.33
DNMT3A-202ENST00000321117 PCSK7Q16549 785 aa13.01□□□□□ -0.33
DNMT3A-202ENST00000321117 CDHR3Q6ZTQ4 885 aa13.01□□□□□ -0.33
DNMT3A-202ENST00000321117 SATL1Q86VE3 508 aa13.01□□□□□ -0.33
DNMT3A-202ENST00000321117 TSPAN14Q8NG11 270 aa13.01□□□□□ -0.33
DNMT3A-202ENST00000321117 PCDH19Q8TAB3 1148 aa13.01□□□□□ -0.33
DNMT3A-202ENST00000321117 DIS3LQ8TF46 1054 aaKnown RBP13.01□□□□□ -0.33
DNMT3A-202ENST00000321117 CCDC126Q96EE4 140 aa13.01□□□□□ -0.33
DNMT3A-202ENST00000321117 LENG8Q96PV6 779 aaPredicted RBP13.01□□□□□ -0.33
DNMT3A-202ENST00000321117 GID8Q9NWU2 228 aa13.01□□□□□ -0.33
DNMT3A-202ENST00000321117 CCDC167Q9P0B6 97 aa13.01□□□□□ -0.33
DNMT3A-202ENST00000321117 TMEM216Q9P0N5 145 aa13.01□□□□□ -0.33
DNMT3A-202ENST00000321117 TMCO1Q9UM00 188 aa13.01□□□□□ -0.33
DNMT3A-202ENST00000321117 AP4S1Q9Y587 144 aa13.01□□□□□ -0.33
DNMT3A-202ENST00000321117 SCN7AQ01118 1682 aa13.01□□□□□ -0.33
DNMT3A-202ENST00000321117 SAC3D1A6NKF1 404 aa13.01□□□□□ -0.33
DNMT3A-202ENST00000321117 ANXA9O76027 345 aa13.01□□□□□ -0.33
DNMT3A-202ENST00000321117 MLNP12872 115 aa13.01□□□□□ -0.33
DNMT3A-202ENST00000321117 DPEP1P16444 411 aa13.01□□□□□ -0.33
DNMT3A-202ENST00000321117 PSMA4P25789 261 aaKnown RBP13.01□□□□□ -0.33
DNMT3A-202ENST00000321117 GRIA4P48058 902 aa13.01□□□□□ -0.33
DNMT3A-202ENST00000321117 DCAF4L1Q3SXM0 396 aa13.01□□□□□ -0.33
DNMT3A-202ENST00000321117 TSHZ1Q6ZSZ6 1077 aa13.01□□□□□ -0.33
DNMT3A-202ENST00000321117 MYLK4Q86YV6 388 aaPredicted RBP13.01□□□□□ -0.33
DNMT3A-202ENST00000321117 C1orf127Q8N9H9 656 aa13.01□□□□□ -0.33
DNMT3A-202ENST00000321117 RNF217Q8TC41 542 aa13.01□□□□□ -0.33
DNMT3A-202ENST00000321117 CALML6Q8TD86 181 aa13.01□□□□□ -0.33
DNMT3A-202ENST00000321117 GIPC2Q8TF65 315 aa13.01□□□□□ -0.33
DNMT3A-202ENST00000321117 TRPC7Q9HCX4 862 aa13.01□□□□□ -0.33
DNMT3A-202ENST00000321117 CSPG5O95196 566 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms