RNA–Protein interactions for RNA: ENST00000320280.8

SCAMP1-201, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 3

Gene SCAMP1, Length 3,766 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-201ENST00000320280 FAM49BQ9NUQ9 324 aa3.4□□□□□ -1.86
SCAMP1-201ENST00000320280 DNMT3BQ9UBC3 853 aaKnown RBP3.4□□□□□ -1.86
SCAMP1-201ENST00000320280 FEZ2Q9UHY8 353 aaPredicted RBP3.4□□□□□ -1.86
SCAMP1-201ENST00000320280 FBXO10Q9UK96 956 aa3.4□□□□□ -1.86
SCAMP1-201ENST00000320280 AMFRQ9UKV5 643 aa3.4□□□□□ -1.86
SCAMP1-201ENST00000320280 MRPS23Q9Y3D9 190 aaKnown RBP3.4□□□□□ -1.86
SCAMP1-201ENST00000320280 DOCK8Q8NF50 2099 aa3.4□□□□□ -1.86
SCAMP1-201ENST00000320280 I3L4J1 428 aa3.4□□□□□ -1.86
SCAMP1-201ENST00000320280 ZNF500O60304 480 aaPredicted RBP3.4□□□□□ -1.86
SCAMP1-201ENST00000320280 ATP2C2O75185 946 aa3.4□□□□□ -1.86
SCAMP1-201ENST00000320280 CLDN11O75508 207 aa3.4□□□□□ -1.86
SCAMP1-201ENST00000320280 TRUB2O95900 331 aaKnown RBP3.4□□□□□ -1.86
SCAMP1-201ENST00000320280 EPCAMP16422 314 aa3.4□□□□□ -1.86
SCAMP1-201ENST00000320280 ACAT1P24752 427 aaKnown RBP3.4□□□□□ -1.86
SCAMP1-201ENST00000320280 TNFRSF4P43489 277 aa3.4□□□□□ -1.86
SCAMP1-201ENST00000320280 CSNK1DP48730 415 aa3.4□□□□□ -1.86
SCAMP1-201ENST00000320280 SULT1E1P49888 294 aa3.4□□□□□ -1.86
SCAMP1-201ENST00000320280 ARSEP51690 589 aa3.4□□□□□ -1.86
SCAMP1-201ENST00000320280 CDH4P55283 916 aa3.4□□□□□ -1.86
SCAMP1-201ENST00000320280 GAD2Q05329 585 aa3.4□□□□□ -1.86
SCAMP1-201ENST00000320280 CKAP4Q07065 602 aaKnown RBP3.4□□□□□ -1.86
SCAMP1-201ENST00000320280 TAF10Q12962 218 aa3.4□□□□□ -1.86
SCAMP1-201ENST00000320280 PARP15Q460N3 678 aa3.4□□□□□ -1.86
SCAMP1-201ENST00000320280 ERMARDQ5T6L9 678 aa3.4□□□□□ -1.86
SCAMP1-201ENST00000320280 TIGD7Q6NT04 549 aaPredicted RBP3.4□□□□□ -1.86
SCAMP1-201ENST00000320280 RAD9BQ6WBX8 426 aa3.4□□□□□ -1.86
SCAMP1-201ENST00000320280 MMS22LQ6ZRQ5 1243 aa3.4□□□□□ -1.86
SCAMP1-201ENST00000320280 SCD5Q86SK9 330 aa3.4□□□□□ -1.86
SCAMP1-201ENST00000320280 CCDC117Q8IWD4 279 aaPredicted RBP3.4□□□□□ -1.86
SCAMP1-201ENST00000320280 CCAR2Q8N163 923 aaKnown RBP3.4□□□□□ -1.86
SCAMP1-201ENST00000320280 RASGEF1CQ8N431 466 aa3.4□□□□□ -1.86
SCAMP1-201ENST00000320280 C12orf29Q8N999 325 aa3.4□□□□□ -1.86
SCAMP1-201ENST00000320280 KIAA1524Q8TCG1 905 aa3.4□□□□□ -1.86
SCAMP1-201ENST00000320280 DQX1Q8TE96 717 aaKnown RBP3.4□□□□□ -1.86
SCAMP1-201ENST00000320280 LRRC45Q96CN5 670 aa3.4□□□□□ -1.86
SCAMP1-201ENST00000320280 SHDQ96IW2 340 aa3.4□□□□□ -1.86
SCAMP1-201ENST00000320280 FCRL2Q96LA5 508 aaPredicted RBP3.4□□□□□ -1.86
SCAMP1-201ENST00000320280 TMEM209Q96SK2 561 aa3.4□□□□□ -1.86
SCAMP1-201ENST00000320280 VAT1Q99536 393 aa3.4□□□□□ -1.86
SCAMP1-201ENST00000320280 CEP44Q9C0F1 390 aa3.4□□□□□ -1.86
SCAMP1-201ENST00000320280 METTL5Q9NRN9 209 aaKnown RBP3.4□□□□□ -1.86
SCAMP1-201ENST00000320280 TDP1Q9NUW8 608 aa3.4□□□□□ -1.86
SCAMP1-201ENST00000320280 TMEM248Q9NWD8 314 aa3.4□□□□□ -1.86
SCAMP1-201ENST00000320280 MARCH2Q9P0N8 246 aa3.4□□□□□ -1.86
SCAMP1-201ENST00000320280 CYTH4Q9UIA0 394 aa3.4□□□□□ -1.86
SCAMP1-201ENST00000320280 FZD10Q9ULW2 581 aa3.4□□□□□ -1.86
SCAMP1-201ENST00000320280 TICRRQ7Z2Z1 1910 aa3.4□□□□□ -1.87
SCAMP1-201ENST00000320280 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP3.4□□□□□ -1.87
SCAMP1-201ENST00000320280 A0A1B0GVM2 712 aa3.4□□□□□ -1.87
SCAMP1-201ENST00000320280 A0A1W2PQH9 124 aa3.4□□□□□ -1.87
SCAMP1-201ENST00000320280 TCAF2A6NFQ2 919 aa3.4□□□□□ -1.87
SCAMP1-201ENST00000320280 CCDC188H7C350 402 aa3.4□□□□□ -1.87
SCAMP1-201ENST00000320280 ADAM12O43184 909 aa3.4□□□□□ -1.87
SCAMP1-201ENST00000320280 PSMD3O43242 534 aa3.4□□□□□ -1.87
SCAMP1-201ENST00000320280 PRPSAP2O60256 369 aa3.4□□□□□ -1.87
SCAMP1-201ENST00000320280 ACSL4O60488 711 aa3.4□□□□□ -1.87
SCAMP1-201ENST00000320280 TBX10O75333 385 aa3.4□□□□□ -1.87
SCAMP1-201ENST00000320280 MOSPD3O75425 235 aa3.4□□□□□ -1.87
SCAMP1-201ENST00000320280 PENKP01210 267 aaPredicted RBP3.4□□□□□ -1.87
SCAMP1-201ENST00000320280 TUBBP07437 444 aa3.4□□□□□ -1.87
SCAMP1-201ENST00000320280 SRPRAP08240 638 aaKnown RBP3.4□□□□□ -1.87
SCAMP1-201ENST00000320280 MYOGP15173 224 aa3.4□□□□□ -1.87
SCAMP1-201ENST00000320280 PDGFRAP16234 1089 aa3.4□□□□□ -1.87
SCAMP1-201ENST00000320280 PSMA2P25787 234 aa3.4□□□□□ -1.87
SCAMP1-201ENST00000320280 NFKBIAP25963 317 aa3.4□□□□□ -1.87
SCAMP1-201ENST00000320280 GABRR2P28476 465 aa3.4□□□□□ -1.87
SCAMP1-201ENST00000320280 AVPR1AP37288 418 aa3.4□□□□□ -1.87
SCAMP1-201ENST00000320280 DPP6P42658 865 aa3.4□□□□□ -1.87
SCAMP1-201ENST00000320280 IFNAR2P48551 515 aa3.4□□□□□ -1.87
SCAMP1-201ENST00000320280 SLC25A11Q02978 314 aaKnown RBP3.4□□□□□ -1.87
SCAMP1-201ENST00000320280 DEUP1Q05D60 604 aa3.4□□□□□ -1.87
SCAMP1-201ENST00000320280 HTR4Q13639 388 aa3.4□□□□□ -1.87
SCAMP1-201ENST00000320280 LRRC32Q14392 662 aa3.4□□□□□ -1.87
SCAMP1-201ENST00000320280 PAFAH1B3Q15102 231 aaKnown RBP3.4□□□□□ -1.87
SCAMP1-201ENST00000320280 HSP90AA4PQ58FG1 418 aa3.4□□□□□ -1.87
SCAMP1-201ENST00000320280 DGKKQ5KSL6 1271 aa3.4□□□□□ -1.87
SCAMP1-201ENST00000320280 MEI1Q5TIA1 1274 aa3.4□□□□□ -1.87
SCAMP1-201ENST00000320280 PAPD7Q5XG87 772 aaKnown RBP3.4□□□□□ -1.87
SCAMP1-201ENST00000320280 ADGRD2Q7Z7M1 963 aa3.4□□□□□ -1.87
SCAMP1-201ENST00000320280 TMEM150AQ86TG1 271 aa3.4□□□□□ -1.87
SCAMP1-201ENST00000320280 C11orf74Q86VG3 221 aa3.4□□□□□ -1.87
SCAMP1-201ENST00000320280 RALGPS2Q86X27 583 aaPredicted RBP3.4□□□□□ -1.87
SCAMP1-201ENST00000320280 EIF1ADQ8N9N8 165 aaKnown RBP3.4□□□□□ -1.87
SCAMP1-201ENST00000320280 C12orf50Q8NA57 414 aaPredicted RBP3.4□□□□□ -1.87
SCAMP1-201ENST00000320280 ATAD1Q8NBU5 361 aa3.4□□□□□ -1.87
SCAMP1-201ENST00000320280 SLC35G2Q8TBE7 412 aa3.4□□□□□ -1.87
SCAMP1-201ENST00000320280 BPIFB1Q8TDL5 484 aa3.4□□□□□ -1.87
SCAMP1-201ENST00000320280 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.4□□□□□ -1.87
SCAMP1-201ENST00000320280 SLCO2A1Q92959 643 aa3.4□□□□□ -1.87
SCAMP1-201ENST00000320280 ISG20Q96AZ6 181 aaKnown RBP3.4□□□□□ -1.87
SCAMP1-201ENST00000320280 TBC1D31Q96DN5 1066 aa3.4□□□□□ -1.87
SCAMP1-201ENST00000320280 XPO6Q96QU8 1125 aaKnown RBP3.4□□□□□ -1.87
SCAMP1-201ENST00000320280 PRMT1Q99873 361 aaKnown RBP3.4□□□□□ -1.87
SCAMP1-201ENST00000320280 C11orf70Q9BRQ4 267 aa3.4□□□□□ -1.87
SCAMP1-201ENST00000320280 FRMD8Q9BZ67 464 aaPredicted RBP3.4□□□□□ -1.87
SCAMP1-201ENST00000320280 MAGEH1Q9H213 219 aa3.4□□□□□ -1.87
SCAMP1-201ENST00000320280 PRDM12Q9H4Q4 367 aa3.4□□□□□ -1.87
SCAMP1-201ENST00000320280 FAM204AQ9H8W3 233 aa3.4□□□□□ -1.87
SCAMP1-201ENST00000320280 ZWILCHQ9H900 591 aa3.4□□□□□ -1.87
SCAMP1-201ENST00000320280 ZFP14Q9HCL3 533 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms