RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 FSCBQ5H9T9 825 aa15.84■□□□□ 0.13
PDLIM5-202ENST00000318007 ARHGAP36Q6ZRI8 547 aa15.84■□□□□ 0.13
PDLIM5-202ENST00000318007 YAF2Q8IY57 180 aa15.84■□□□□ 0.13
PDLIM5-202ENST00000318007 ADGRG2Q8IZP9 1017 aa15.84■□□□□ 0.13
PDLIM5-202ENST00000318007 OSCP1Q8WVF1 389 aa15.84■□□□□ 0.13
PDLIM5-202ENST00000318007 FAF2Q96CS3 445 aa15.84■□□□□ 0.13
PDLIM5-202ENST00000318007 CATSPERBQ9H7T0 1116 aa15.84■□□□□ 0.13
PDLIM5-202ENST00000318007 KIF9Q9HAQ2 790 aa15.84■□□□□ 0.13
PDLIM5-202ENST00000318007 A0A0D9SEW6 157 aa15.83■□□□□ 0.12
PDLIM5-202ENST00000318007 CDH18Q13634 790 aa15.83■□□□□ 0.12
PDLIM5-202ENST00000318007 SIX1Q15475 284 aaPredicted RBP15.83■□□□□ 0.12
PDLIM5-202ENST00000318007 TAZQ16635 292 aa15.83■□□□□ 0.12
PDLIM5-202ENST00000318007 SLC9A4Q6AI14 798 aa15.83■□□□□ 0.12
PDLIM5-202ENST00000318007 MFN1Q8IWA4 741 aa15.83■□□□□ 0.12
PDLIM5-202ENST00000318007 CCNYQ8ND76 341 aa15.83■□□□□ 0.12
PDLIM5-202ENST00000318007 CCDC114Q96M63 670 aa15.83■□□□□ 0.12
PDLIM5-202ENST00000318007 CEP41Q9BYV8 373 aa15.83■□□□□ 0.12
PDLIM5-202ENST00000318007 SPHK2Q9NRA0 654 aa15.83■□□□□ 0.12
PDLIM5-202ENST00000318007 DTLQ9NZJ0 730 aa15.83■□□□□ 0.12
PDLIM5-202ENST00000318007 IGLV3-10A0A075B6K4 115 aa15.82■□□□□ 0.12
PDLIM5-202ENST00000318007 TYRP14679 529 aa15.82■□□□□ 0.12
PDLIM5-202ENST00000318007 HOXD9P28356 352 aaPredicted RBP15.82■□□□□ 0.12
PDLIM5-202ENST00000318007 TFDP2Q14188 446 aa15.82■□□□□ 0.12
PDLIM5-202ENST00000318007 AAK1Q2M2I8 961 aa15.82■□□□□ 0.12
PDLIM5-202ENST00000318007 EML3Q32P44 896 aa15.82■□□□□ 0.12
PDLIM5-202ENST00000318007 NAIF1Q69YI7 327 aaPredicted RBP15.82■□□□□ 0.12
PDLIM5-202ENST00000318007 BBS12Q6ZW61 710 aa15.82■□□□□ 0.12
PDLIM5-202ENST00000318007 PRUNE1Q86TP1 453 aa15.82■□□□□ 0.12
PDLIM5-202ENST00000318007 NLRP14Q86W24 1093 aa15.82■□□□□ 0.12
PDLIM5-202ENST00000318007 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.82■□□□□ 0.12
PDLIM5-202ENST00000318007 RTL3Q8N8U3 475 aaKnown RBP15.82■□□□□ 0.12
PDLIM5-202ENST00000318007 PRELID2Q8N945 189 aa15.82■□□□□ 0.12
PDLIM5-202ENST00000318007 SPATA4Q8NEY3 305 aa15.82■□□□□ 0.12
PDLIM5-202ENST00000318007 IRF7Q92985 503 aa15.82■□□□□ 0.12
PDLIM5-202ENST00000318007 LGMNQ99538 433 aa15.82■□□□□ 0.12
PDLIM5-202ENST00000318007 DDX50Q9BQ39 737 aaKnown RBP15.82■□□□□ 0.12
PDLIM5-202ENST00000318007 RCOR3Q9P2K3 495 aaPredicted RBP15.82■□□□□ 0.12
PDLIM5-202ENST00000318007 STOML2Q9UJZ1 356 aa15.82■□□□□ 0.12
PDLIM5-202ENST00000318007 DNPEPQ9ULA0 475 aa15.82■□□□□ 0.12
PDLIM5-202ENST00000318007 ZNF510Q9Y2H8 683 aa15.82■□□□□ 0.12
PDLIM5-202ENST00000318007 SOBPA7XYQ1 873 aa15.82■□□□□ 0.12
PDLIM5-202ENST00000318007 CES2O00748 559 aa15.82■□□□□ 0.12
PDLIM5-202ENST00000318007 FGF10O15520 208 aaPredicted RBP15.82■□□□□ 0.12
PDLIM5-202ENST00000318007 CYBBP04839 570 aa15.82■□□□□ 0.12
PDLIM5-202ENST00000318007 CYP17A1P05093 508 aa15.82■□□□□ 0.12
PDLIM5-202ENST00000318007 PSMC3P17980 439 aa15.82■□□□□ 0.12
PDLIM5-202ENST00000318007 WHAMMP3Q1A5X7 153 aa15.82■□□□□ 0.12
PDLIM5-202ENST00000318007 FYB2Q5VWT5 728 aa15.82■□□□□ 0.12
PDLIM5-202ENST00000318007 RHBDF2Q6PJF5 856 aa15.82■□□□□ 0.12
PDLIM5-202ENST00000318007 TAB3Q8N5C8 712 aaPredicted RBP15.82■□□□□ 0.12
PDLIM5-202ENST00000318007 HJURPQ8NCD3 748 aaPredicted RBP15.82■□□□□ 0.12
PDLIM5-202ENST00000318007 AZIN2Q96A70 460 aa15.82■□□□□ 0.12
PDLIM5-202ENST00000318007 KRT12Q99456 494 aa15.82■□□□□ 0.12
PDLIM5-202ENST00000318007 TMEM121Q9BTD3 319 aa15.82■□□□□ 0.12
PDLIM5-202ENST00000318007 PHF7Q9BWX1 381 aaPredicted RBP15.82■□□□□ 0.12
PDLIM5-202ENST00000318007 SEPT10Q9P0V9 454 aa15.82■□□□□ 0.12
PDLIM5-202ENST00000318007 TBC1D14Q9P2M4 693 aa15.82■□□□□ 0.12
PDLIM5-202ENST00000318007 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.82■□□□□ 0.12
PDLIM5-202ENST00000318007 V9GYY5 206 aaPredicted RBP15.82■□□□□ 0.12
PDLIM5-202ENST00000318007 NUP205Q92621 2012 aa15.81■□□□□ 0.12
PDLIM5-202ENST00000318007 A0A1B0GVM2 712 aa15.81■□□□□ 0.12
PDLIM5-202ENST00000318007 TCAF2A6NFQ2 919 aa15.81■□□□□ 0.12
PDLIM5-202ENST00000318007 DRGXA6NNA5 263 aa15.81■□□□□ 0.12
PDLIM5-202ENST00000318007 H7C0C1 242 aa15.81■□□□□ 0.12
PDLIM5-202ENST00000318007 APOC4-APOC2K7ER74 178 aa15.81■□□□□ 0.12
PDLIM5-202ENST00000318007 RIOK3O14730 519 aaKnown RBP15.81■□□□□ 0.12
PDLIM5-202ENST00000318007 APOC2P02655 101 aa15.81■□□□□ 0.12
PDLIM5-202ENST00000318007 RHOQP17081 205 aa15.81■□□□□ 0.12
PDLIM5-202ENST00000318007 HOXC13P31276 330 aa15.81■□□□□ 0.12
PDLIM5-202ENST00000318007 PTPN7P35236 360 aa15.81■□□□□ 0.12
PDLIM5-202ENST00000318007 ACVRL1P37023 503 aa15.81■□□□□ 0.12
PDLIM5-202ENST00000318007 ATP5OP48047 213 aa15.81■□□□□ 0.12
PDLIM5-202ENST00000318007 AP1B1Q10567 949 aa15.81■□□□□ 0.12
PDLIM5-202ENST00000318007 DHCR24Q15392 516 aa15.81■□□□□ 0.12
PDLIM5-202ENST00000318007 SMAD2Q15796 467 aaKnown RBP15.81■□□□□ 0.12
PDLIM5-202ENST00000318007 MPPE1Q53F39 396 aa15.81■□□□□ 0.12
PDLIM5-202ENST00000318007 TTC27Q6P3X3 843 aa15.81■□□□□ 0.12
PDLIM5-202ENST00000318007 C12orf40Q86WS4 652 aa15.81■□□□□ 0.12
PDLIM5-202ENST00000318007 MFSD6LQ8IWD5 586 aa15.81■□□□□ 0.12
PDLIM5-202ENST00000318007 OR7D4Q8NG98 312 aa15.81■□□□□ 0.12
PDLIM5-202ENST00000318007 MAGOHBQ96A72 148 aaKnown RBP15.81■□□□□ 0.12
PDLIM5-202ENST00000318007 HMCESQ96FZ2 354 aa15.81■□□□□ 0.12
PDLIM5-202ENST00000318007 NAP1L3Q99457 506 aaPredicted RBP15.81■□□□□ 0.12
PDLIM5-202ENST00000318007 SPON2Q9BUD6 331 aa15.81■□□□□ 0.12
PDLIM5-202ENST00000318007 SLC39A8Q9C0K1 460 aa15.81■□□□□ 0.12
PDLIM5-202ENST00000318007 MUC3BQ9H195 1237 aa15.81■□□□□ 0.12
PDLIM5-202ENST00000318007 TMEM248Q9NWD8 314 aa15.81■□□□□ 0.12
PDLIM5-202ENST00000318007 THG1LQ9NWX6 298 aaKnown RBP15.81■□□□□ 0.12
PDLIM5-202ENST00000318007 PPARGC1AQ9UBK2 798 aaKnown RBP15.81■□□□□ 0.12
PDLIM5-202ENST00000318007 ACTL7AQ9Y615 435 aa15.81■□□□□ 0.12
PDLIM5-202ENST00000318007 DOCK4Q8N1I0 1966 aa15.81■□□□□ 0.12
PDLIM5-202ENST00000318007 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.8■□□□□ 0.12
PDLIM5-202ENST00000318007 GOLGA6L10A0A0M3HER8 536 aa15.8■□□□□ 0.12
PDLIM5-202ENST00000318007 F5H423 210 aaPredicted RBP15.8■□□□□ 0.12
PDLIM5-202ENST00000318007 LATS1O95835 1130 aa15.8■□□□□ 0.12
PDLIM5-202ENST00000318007 RHOCP08134 193 aa15.8■□□□□ 0.12
PDLIM5-202ENST00000318007 GLDCP23378 1020 aa15.8■□□□□ 0.12
PDLIM5-202ENST00000318007 MZF1P28698 734 aaPredicted RBP15.8■□□□□ 0.12
PDLIM5-202ENST00000318007 SOX9P48436 509 aa15.8■□□□□ 0.12
PDLIM5-202ENST00000318007 CDH4P55283 916 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms