RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 MTMR10Q9NXD2 777 aa14.57□□□□□ -0.08
VRK3-201ENST00000316763 ZFP69BQ9UJL9 534 aa14.57□□□□□ -0.08
VRK3-201ENST00000316763 GRXCR1A8MXD5 290 aa14.56□□□□□ -0.08
VRK3-201ENST00000316763 TGDSO95455 350 aa14.56□□□□□ -0.08
VRK3-201ENST00000316763 ETV4P43268 484 aa14.56□□□□□ -0.08
VRK3-201ENST00000316763 MAGEA3P43357 314 aa14.56□□□□□ -0.08
VRK3-201ENST00000316763 SULT1E1P49888 294 aa14.56□□□□□ -0.08
VRK3-201ENST00000316763 RABGGTBP53611 331 aa14.56□□□□□ -0.08
VRK3-201ENST00000316763 SLC10A2Q12908 348 aaPredicted RBP14.56□□□□□ -0.08
VRK3-201ENST00000316763 SEMA5AQ13591 1074 aa14.56□□□□□ -0.08
VRK3-201ENST00000316763 MRPL58Q14197 206 aaKnown RBP14.56□□□□□ -0.08
VRK3-201ENST00000316763 BTG3Q14201 252 aaPredicted RBP14.56□□□□□ -0.08
VRK3-201ENST00000316763 FAM109BQ6ICB4 259 aaPredicted RBP14.56□□□□□ -0.08
VRK3-201ENST00000316763 SH2D5Q6ZV89 423 aa14.56□□□□□ -0.08
VRK3-201ENST00000316763 CMTR2Q8IYT2 770 aaKnown RBP14.56□□□□□ -0.08
VRK3-201ENST00000316763 CCDC185Q8N715 623 aa14.56□□□□□ -0.08
VRK3-201ENST00000316763 MYLPFQ96A32 169 aa14.56□□□□□ -0.08
VRK3-201ENST00000316763 TTC17Q96AE7 1141 aa14.56□□□□□ -0.08
VRK3-201ENST00000316763 FAM149B1Q96BN6 582 aa14.56□□□□□ -0.08
VRK3-201ENST00000316763 SMARCD1Q96GM5 515 aa14.56□□□□□ -0.08
VRK3-201ENST00000316763 TMEM209Q96SK2 561 aa14.56□□□□□ -0.08
VRK3-201ENST00000316763 RAD9AQ99638 391 aa14.56□□□□□ -0.08
VRK3-201ENST00000316763 SMOQ99835 787 aa14.56□□□□□ -0.08
VRK3-201ENST00000316763 TACO1Q9BSH4 297 aaKnown RBP14.56□□□□□ -0.08
VRK3-201ENST00000316763 GPR62Q9BZJ7 368 aa14.56□□□□□ -0.08
VRK3-201ENST00000316763 SAR1AQ9NR31 198 aa14.56□□□□□ -0.08
VRK3-201ENST00000316763 TMEM30AQ9NV96 361 aa14.56□□□□□ -0.08
VRK3-201ENST00000316763 TMLHEQ9NVH6 421 aa14.56□□□□□ -0.08
VRK3-201ENST00000316763 FZD10Q9ULW2 581 aa14.56□□□□□ -0.08
VRK3-201ENST00000316763 INSL6Q9Y581 213 aa14.56□□□□□ -0.08
VRK3-201ENST00000316763 MAD1L1Q9Y6D9 718 aa14.56□□□□□ -0.08
VRK3-201ENST00000316763 H3BRJ5 948 aa14.56□□□□□ -0.08
VRK3-201ENST00000316763 TLL1O43897 1013 aa14.56□□□□□ -0.08
VRK3-201ENST00000316763 DAB1O75553 588 aa14.56□□□□□ -0.08
VRK3-201ENST00000316763 ZNF189O75820 626 aaPredicted RBP14.56□□□□□ -0.08
VRK3-201ENST00000316763 AP1G2O75843 785 aa14.56□□□□□ -0.08
VRK3-201ENST00000316763 METTL18O95568 372 aa14.56□□□□□ -0.08
VRK3-201ENST00000316763 EFEMP2O95967 443 aa14.56□□□□□ -0.08
VRK3-201ENST00000316763 IL1BP01584 269 aa14.56□□□□□ -0.08
VRK3-201ENST00000316763 FGFR3P22607 806 aa14.56□□□□□ -0.08
VRK3-201ENST00000316763 AMPD1P23109 780 aa14.56□□□□□ -0.08
VRK3-201ENST00000316763 ATXN1P54253 815 aaKnown RBP14.56□□□□□ -0.08
VRK3-201ENST00000316763 TSPY1Q01534 308 aa14.56□□□□□ -0.08
VRK3-201ENST00000316763 NCBP2-AS2Q69YL0 99 aa14.56□□□□□ -0.08
VRK3-201ENST00000316763 UNC5AQ6ZN44 842 aa14.56□□□□□ -0.08
VRK3-201ENST00000316763 DEFB106AQ8N104 65 aa14.56□□□□□ -0.08
VRK3-201ENST00000316763 ZMIZ2Q8NF64 920 aa14.56□□□□□ -0.08
VRK3-201ENST00000316763 HTR3CQ8WXA8 447 aa14.56□□□□□ -0.08
VRK3-201ENST00000316763 SIGLEC10Q96LC7 697 aa14.56□□□□□ -0.08
VRK3-201ENST00000316763 TMEM237Q96Q45 408 aa14.56□□□□□ -0.08
VRK3-201ENST00000316763 CWH43Q9H720 699 aa14.56□□□□□ -0.08
VRK3-201ENST00000316763 DTLQ9NZJ0 730 aa14.56□□□□□ -0.08
VRK3-201ENST00000316763 TRIM33Q9UPN9 1127 aa14.56□□□□□ -0.08
VRK3-201ENST00000316763 MTO1Q9Y2Z2 717 aaKnown RBP14.56□□□□□ -0.08
VRK3-201ENST00000316763 PCDHA11Q9Y5I1 949 aa14.56□□□□□ -0.08
VRK3-201ENST00000316763 SF3B1O75533 1304 aaKnown RBP eCLIP14.56□□□□□ -0.083e-6■■■■■ 137.9
VRK3-201ENST00000316763 LAMA2P24043 3122 aaKnown RBP14.55□□□□□ -0.08
VRK3-201ENST00000316763 A0A0A0MRY4 1105 aa14.55□□□□□ -0.08
VRK3-201ENST00000316763 HHLA1C9JL84 531 aa14.55□□□□□ -0.08
VRK3-201ENST00000316763 C1QAP02745 245 aa14.55□□□□□ -0.08
VRK3-201ENST00000316763 MLNP12872 115 aa14.55□□□□□ -0.08
VRK3-201ENST00000316763 CCND1P24385 295 aa14.55□□□□□ -0.08
VRK3-201ENST00000316763 CNTFP26441 200 aa14.55□□□□□ -0.08
VRK3-201ENST00000316763 SERPINB4P48594 390 aa14.55□□□□□ -0.08
VRK3-201ENST00000316763 CACNA2D1P54289 1103 aa14.55□□□□□ -0.08
VRK3-201ENST00000316763 MAP3K7CLP57077 242 aa14.55□□□□□ -0.08
VRK3-201ENST00000316763 ELAVL2Q12926 359 aaKnown RBP14.55□□□□□ -0.08
VRK3-201ENST00000316763 RAB41Q5JT25 222 aa14.55□□□□□ -0.08
VRK3-201ENST00000316763 VARS2Q5ST30 1063 aaKnown RBP14.55□□□□□ -0.08
VRK3-201ENST00000316763 FUT10Q6P4F1 479 aa14.55□□□□□ -0.08
VRK3-201ENST00000316763 TMEM173Q86WV6 379 aaPredicted RBP14.55□□□□□ -0.08
VRK3-201ENST00000316763 TBC1D31Q96DN5 1066 aa14.55□□□□□ -0.08
VRK3-201ENST00000316763 SPATA13Q96N96 652 aa14.55□□□□□ -0.08
VRK3-201ENST00000316763 SRPK1Q96SB4 655 aaKnown RBP14.55□□□□□ -0.08
VRK3-201ENST00000316763 ZCWPW1Q9H0M4 648 aa14.55□□□□□ -0.08
VRK3-201ENST00000316763 C12orf65Q9H3J6 166 aaKnown RBP14.55□□□□□ -0.08
VRK3-201ENST00000316763 MKS1Q9NXB0 559 aa14.55□□□□□ -0.08
VRK3-201ENST00000316763 STAP1Q9ULZ2 295 aa14.55□□□□□ -0.08
VRK3-201ENST00000316763 KIAA1671Q9BY89 1806 aa14.55□□□□□ -0.08
VRK3-201ENST00000316763 RANBP2P49792 3224 aaKnown RBP14.55□□□□□ -0.08
VRK3-201ENST00000316763 FAM159BA6NKW6 160 aa14.54□□□□□ -0.08
VRK3-201ENST00000316763 CXorf49A8MYA2 514 aaPredicted RBP14.54□□□□□ -0.08
VRK3-201ENST00000316763 KLF11O14901 512 aa14.54□□□□□ -0.08
VRK3-201ENST00000316763 WFS1O76024 890 aa14.54□□□□□ -0.08
VRK3-201ENST00000316763 GOT1P17174 413 aa14.54□□□□□ -0.08
VRK3-201ENST00000316763 TARSP26639 723 aaKnown RBP14.54□□□□□ -0.08
VRK3-201ENST00000316763 NOS2P35228 1153 aa14.54□□□□□ -0.08
VRK3-201ENST00000316763 PBX3P40426 434 aa14.54□□□□□ -0.08
VRK3-201ENST00000316763 ARFIP2P53365 341 aa14.54□□□□□ -0.08
VRK3-201ENST00000316763 MRPS5P82675 430 aaKnown RBP14.54□□□□□ -0.08
VRK3-201ENST00000316763 ADIGQ0VDE8 80 aa14.54□□□□□ -0.08
VRK3-201ENST00000316763 PRKD1Q15139 912 aaPredicted RBP14.54□□□□□ -0.08
VRK3-201ENST00000316763 E2F5Q15329 346 aa14.54□□□□□ -0.08
VRK3-201ENST00000316763 ANKRD20A2Q5SQ80 823 aa14.54□□□□□ -0.08
VRK3-201ENST00000316763 ANKRD20A1Q5TYW2 823 aa14.54□□□□□ -0.08
VRK3-201ENST00000316763 FAM171A1Q5VUB5 890 aa14.54□□□□□ -0.08
VRK3-201ENST00000316763 ANKRD20A3Q5VUR7 823 aa14.54□□□□□ -0.08
VRK3-201ENST00000316763 CHRDL2Q6WN34 429 aa14.54□□□□□ -0.08
VRK3-201ENST00000316763 CYS1Q717R9 158 aa14.54□□□□□ -0.08
VRK3-201ENST00000316763 FAM131BQ86XD5 332 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms