RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 H3BMQ9 156 aa6.8□□□□□ -1.32
ZNF540-201ENST00000316433 SHOXO15266 292 aa6.8□□□□□ -1.32
ZNF540-201ENST00000316433 DYNC1LI2O43237 492 aaPredicted RBP6.8□□□□□ -1.32
ZNF540-201ENST00000316433 MTSS1O43312 755 aa6.8□□□□□ -1.32
ZNF540-201ENST00000316433 OR5F1O95221 314 aa6.8□□□□□ -1.32
ZNF540-201ENST00000316433 H6PDO95479 791 aa6.8□□□□□ -1.32
ZNF540-201ENST00000316433 EGFRP00533 1210 aa6.8□□□□□ -1.32
ZNF540-201ENST00000316433 FGFR1P11362 822 aa6.8□□□□□ -1.32
ZNF540-201ENST00000316433 PLS3P13797 630 aa6.8□□□□□ -1.32
ZNF540-201ENST00000316433 ITIH1P19827 911 aa6.8□□□□□ -1.32
ZNF540-201ENST00000316433 PIK3CAP42336 1068 aa6.8□□□□□ -1.32
ZNF540-201ENST00000316433 BLVRAP53004 296 aa6.8□□□□□ -1.32
ZNF540-201ENST00000316433 POLR2GP62487 172 aaKnown RBP eCLIP6.8□□□□□ -1.32
ZNF540-201ENST00000316433 TMED2Q15363 201 aa6.8□□□□□ -1.32
ZNF540-201ENST00000316433 DLGAP5Q15398 846 aa6.8□□□□□ -1.32
ZNF540-201ENST00000316433 TAF12Q16514 161 aa6.8□□□□□ -1.32
ZNF540-201ENST00000316433 C6orf52Q5T4I8 152 aa6.8□□□□□ -1.32
ZNF540-201ENST00000316433 CORO6Q6QEF8 472 aa6.8□□□□□ -1.32
ZNF540-201ENST00000316433 PODNQ7Z5L7 613 aa6.8□□□□□ -1.32
ZNF540-201ENST00000316433 FBXL6Q8N531 539 aa6.8□□□□□ -1.32
ZNF540-201ENST00000316433 AADATQ8N5Z0 425 aa6.8□□□□□ -1.32
ZNF540-201ENST00000316433 APPL2Q8NEU8 664 aa6.8□□□□□ -1.32
ZNF540-201ENST00000316433 ZNF420Q8TAQ5 688 aaPredicted RBP6.8□□□□□ -1.32
ZNF540-201ENST00000316433 AFG1LQ8WV93 481 aa6.8□□□□□ -1.32
ZNF540-201ENST00000316433 OXNAD1Q96HP4 312 aaPredicted RBP6.8□□□□□ -1.32
ZNF540-201ENST00000316433 CEP170P1Q96L14 293 aa6.8□□□□□ -1.32
ZNF540-201ENST00000316433 CEP19Q96LK0 163 aa6.8□□□□□ -1.32
ZNF540-201ENST00000316433 COG8Q96MW5 612 aa6.8□□□□□ -1.32
ZNF540-201ENST00000316433 RUSC1Q9BVN2 902 aa6.8□□□□□ -1.32
ZNF540-201ENST00000316433 ZNF518BQ9C0D4 1074 aa6.8□□□□□ -1.32
ZNF540-201ENST00000316433 KCNN2Q9H2S1 579 aa6.8□□□□□ -1.32
ZNF540-201ENST00000316433 PDLIM7Q9NR12 457 aa6.8□□□□□ -1.32
ZNF540-201ENST00000316433 UBIAD1Q9Y5Z9 338 aa6.8□□□□□ -1.32
ZNF540-201ENST00000316433 C1orf232A0A0U1RR37 186 aa6.8□□□□□ -1.32
ZNF540-201ENST00000316433 ARHGAP42A6NI28 874 aa6.8□□□□□ -1.32
ZNF540-201ENST00000316433 KBTBD13C9JR72 458 aa6.8□□□□□ -1.32
ZNF540-201ENST00000316433 CAPNS1P04632 268 aa6.8□□□□□ -1.32
ZNF540-201ENST00000316433 CDH1P12830 882 aa6.8□□□□□ -1.32
ZNF540-201ENST00000316433 PSMC3P17980 439 aa6.8□□□□□ -1.32
ZNF540-201ENST00000316433 ATF6P18850 670 aa6.8□□□□□ -1.32
ZNF540-201ENST00000316433 SFNP31947 248 aa6.8□□□□□ -1.32
ZNF540-201ENST00000316433 MAGEA4P43358 317 aa6.8□□□□□ -1.32
ZNF540-201ENST00000316433 MFAP3P55082 362 aa6.8□□□□□ -1.32
ZNF540-201ENST00000316433 POU6F2P78424 691 aaPredicted RBP6.8□□□□□ -1.32
ZNF540-201ENST00000316433 TMPRSS15P98073 1019 aa6.8□□□□□ -1.32
ZNF540-201ENST00000316433 FMO1Q01740 532 aa6.8□□□□□ -1.32
ZNF540-201ENST00000316433 MAPRE2Q15555 327 aa6.8□□□□□ -1.32
ZNF540-201ENST00000316433 PGS1Q32NB8 556 aa6.8□□□□□ -1.32
ZNF540-201ENST00000316433 FGD3Q5JSP0 725 aa6.8□□□□□ -1.32
ZNF540-201ENST00000316433 AARS2Q5JTZ9 985 aaKnown RBP6.8□□□□□ -1.32
ZNF540-201ENST00000316433 PERM1Q5SV97 790 aa6.8□□□□□ -1.32
ZNF540-201ENST00000316433 RARS2Q5T160 578 aaKnown RBP6.8□□□□□ -1.32
ZNF540-201ENST00000316433 GALNT18Q6P9A2 607 aa6.8□□□□□ -1.32
ZNF540-201ENST00000316433 CCDC137Q6PK04 289 aaKnown RBP6.8□□□□□ -1.32
ZNF540-201ENST00000316433 DYMQ7RTS9 669 aa6.8□□□□□ -1.32
ZNF540-201ENST00000316433 ZDHHC14Q8IZN3 488 aa6.8□□□□□ -1.32
ZNF540-201ENST00000316433 HS6ST3Q8IZP7 471 aa6.8□□□□□ -1.32
ZNF540-201ENST00000316433 BEND7Q8N7W2 519 aaPredicted RBP6.8□□□□□ -1.32
ZNF540-201ENST00000316433 TTC13Q8NBP0 860 aa6.8□□□□□ -1.32
ZNF540-201ENST00000316433 SLAIN1Q8ND83 568 aa6.8□□□□□ -1.32
ZNF540-201ENST00000316433 SLC22A8Q8TCC7 542 aa6.8□□□□□ -1.32
ZNF540-201ENST00000316433 MZB1Q8WU39 189 aa6.8□□□□□ -1.32
ZNF540-201ENST00000316433 NXPE3Q969Y0 559 aa6.8□□□□□ -1.32
ZNF540-201ENST00000316433 C18orf8Q96DM3 657 aa6.8□□□□□ -1.32
ZNF540-201ENST00000316433 SLC39A13Q96H72 371 aa6.8□□□□□ -1.32
ZNF540-201ENST00000316433 DOK1Q99704 481 aa6.8□□□□□ -1.32
ZNF540-201ENST00000316433 CLSTN3Q9BQT9 956 aa6.8□□□□□ -1.32
ZNF540-201ENST00000316433 NMUR2Q9GZQ4 415 aa6.8□□□□□ -1.32
ZNF540-201ENST00000316433 C1orf21Q9H246 121 aa6.8□□□□□ -1.32
ZNF540-201ENST00000316433 NARFLQ9H6Q4 476 aa6.8□□□□□ -1.32
ZNF540-201ENST00000316433 NOL6Q9H6R4 1146 aaKnown RBP6.8□□□□□ -1.32
ZNF540-201ENST00000316433 ATP6V1HQ9UI12 483 aa6.8□□□□□ -1.32
ZNF540-201ENST00000316433 TAGLN3Q9UI15 199 aa6.8□□□□□ -1.32
ZNF540-201ENST00000316433 XPO7Q9UIA9 1087 aaKnown RBP6.8□□□□□ -1.32
ZNF540-201ENST00000316433 SOX13Q9UN79 622 aa6.8□□□□□ -1.32
ZNF540-201ENST00000316433 MAU2Q9Y6X3 613 aa6.8□□□□□ -1.32
ZNF540-201ENST00000316433 TYW5A2RUC4 315 aaKnown RBP6.8□□□□□ -1.32
ZNF540-201ENST00000316433 OR5K3A6NET4 321 aa6.8□□□□□ -1.32
ZNF540-201ENST00000316433 TRIM64A6NGJ6 449 aa6.8□□□□□ -1.32
ZNF540-201ENST00000316433 TRIM64BA6NI03 449 aa6.8□□□□□ -1.32
ZNF540-201ENST00000316433 CAPN14A8MX76 684 aa6.8□□□□□ -1.32
ZNF540-201ENST00000316433 FAM86B1E9PN63 330 aa6.8□□□□□ -1.32
ZNF540-201ENST00000316433 ATP2A1O14983 1001 aa6.8□□□□□ -1.32
ZNF540-201ENST00000316433 ASNA1O43681 348 aa6.8□□□□□ -1.32
ZNF540-201ENST00000316433 TYROBPO43914 113 aa6.8□□□□□ -1.32
ZNF540-201ENST00000316433 CCNT2O60583 730 aaKnown RBP6.8□□□□□ -1.32
ZNF540-201ENST00000316433 SNAP91O60641 907 aa6.8□□□□□ -1.32
ZNF540-201ENST00000316433 EPN2O95208 641 aa6.8□□□□□ -1.32
ZNF540-201ENST00000316433 ITGAVP06756 1048 aa6.8□□□□□ -1.32
ZNF540-201ENST00000316433 FAM86B2P0C5J1 330 aa6.8□□□□□ -1.32
ZNF540-201ENST00000316433 DBTP11182 482 aaKnown RBP6.8□□□□□ -1.32
ZNF540-201ENST00000316433 GFAPP14136 432 aa6.8□□□□□ -1.32
ZNF540-201ENST00000316433 ITGAXP20702 1163 aa6.8□□□□□ -1.32
ZNF540-201ENST00000316433 TNFAIP3P21580 790 aa6.8□□□□□ -1.32
ZNF540-201ENST00000316433 TGM1P22735 817 aa6.8□□□□□ -1.32
ZNF540-201ENST00000316433 GABRB3P28472 473 aa6.8□□□□□ -1.32
ZNF540-201ENST00000316433 RRM2P31350 389 aa6.8□□□□□ -1.32
ZNF540-201ENST00000316433 HPCAL1P37235 193 aa6.8□□□□□ -1.32
ZNF540-201ENST00000316433 NAMPTP43490 491 aa6.8□□□□□ -1.32
ZNF540-201ENST00000316433 RHAGQ02094 409 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms