RNA–Protein interactions for RNA: ENST00000315491.11

TUBB3-201, Transcript of tubulin beta 3 class III, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB3, Length 1,769 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-201ENST00000315491 FOSL2P15408 326 aa16.59■□□□□ 0.25
TUBB3-201ENST00000315491 NR2C2P49116 596 aa16.59■□□□□ 0.25
TUBB3-201ENST00000315491 GBE1Q04446 702 aa16.59■□□□□ 0.25
TUBB3-201ENST00000315491 NOMO1Q15155 1222 aa16.59■□□□□ 0.25
TUBB3-201ENST00000315491 CCDC85BQ15834 202 aaPredicted RBP16.59■□□□□ 0.25
TUBB3-201ENST00000315491 ALFQ53S48 1182 aa16.59■□□□□ 0.25
TUBB3-201ENST00000315491 NLRP14Q86W24 1093 aa16.59■□□□□ 0.25
TUBB3-201ENST00000315491 CPXM2Q8N436 756 aa16.59■□□□□ 0.25
TUBB3-201ENST00000315491 RTL3Q8N8U3 475 aaKnown RBP16.59■□□□□ 0.25
TUBB3-201ENST00000315491 NOA1Q8NC60 698 aaKnown RBP16.59■□□□□ 0.25
TUBB3-201ENST00000315491 NECTIN4Q96NY8 510 aa16.59■□□□□ 0.25
TUBB3-201ENST00000315491 KRT12Q99456 494 aa16.59■□□□□ 0.25
TUBB3-201ENST00000315491 POMKQ9H5K3 350 aa16.59■□□□□ 0.25
TUBB3-201ENST00000315491 ZFP37Q9Y6Q3 630 aaPredicted RBP16.59■□□□□ 0.25
TUBB3-201ENST00000315491 HELZP42694 1942 aaKnown RBP16.59■□□□□ 0.25
TUBB3-201ENST00000315491 GFRA2O00451 464 aa16.59■□□□□ 0.25
TUBB3-201ENST00000315491 MAP2K7O14733 419 aa16.59■□□□□ 0.25
TUBB3-201ENST00000315491 LIASO43766 372 aa16.59■□□□□ 0.25
TUBB3-201ENST00000315491 TSPAN3O60637 253 aa16.59■□□□□ 0.25
TUBB3-201ENST00000315491 CHRNA3P32297 505 aa16.59■□□□□ 0.25
TUBB3-201ENST00000315491 SERPINB6P35237 376 aa16.59■□□□□ 0.25
TUBB3-201ENST00000315491 CHKAP35790 457 aa16.59■□□□□ 0.25
TUBB3-201ENST00000315491 VCPP55072 806 aaKnown RBP16.59■□□□□ 0.25
TUBB3-201ENST00000315491 SNX1Q13596 522 aa16.59■□□□□ 0.25
TUBB3-201ENST00000315491 CIR1Q86X95 450 aaPredicted RBP16.59■□□□□ 0.25
TUBB3-201ENST00000315491 C10orf67Q8IYJ2 551 aa16.59■□□□□ 0.25
TUBB3-201ENST00000315491 CFAP52Q8N1V2 620 aa16.59■□□□□ 0.25
TUBB3-201ENST00000315491 MMGT1Q8N4V1 131 aa16.59■□□□□ 0.25
TUBB3-201ENST00000315491 DEFB123Q8N688 67 aa16.59■□□□□ 0.25
TUBB3-201ENST00000315491 SLC35B2Q8TB61 432 aa16.59■□□□□ 0.25
TUBB3-201ENST00000315491 MYADMQ96S97 322 aa16.59■□□□□ 0.25
TUBB3-201ENST00000315491 TMEM248Q9NWD8 314 aa16.59■□□□□ 0.25
TUBB3-201ENST00000315491 DTLQ9NZJ0 730 aa16.59■□□□□ 0.25
TUBB3-201ENST00000315491 CCDC151A5D8V7 595 aa16.58■□□□□ 0.24
TUBB3-201ENST00000315491 H3BQ06 376 aaPredicted RBP16.58■□□□□ 0.24
TUBB3-201ENST00000315491 MCF2LO15068 1137 aa16.58■□□□□ 0.24
TUBB3-201ENST00000315491 GBP2P32456 591 aaPredicted RBP16.58■□□□□ 0.24
TUBB3-201ENST00000315491 COILP38432 576 aaPredicted RBP16.58■□□□□ 0.24
TUBB3-201ENST00000315491 VIPR2P41587 438 aa16.58■□□□□ 0.24
TUBB3-201ENST00000315491 FNTAP49354 379 aa16.58■□□□□ 0.24
TUBB3-201ENST00000315491 SGSHP51688 502 aa16.58■□□□□ 0.24
TUBB3-201ENST00000315491 EIF3EP60228 445 aaKnown RBP16.58■□□□□ 0.24
TUBB3-201ENST00000315491 RPS24P62847 133 aaKnown RBP16.58■□□□□ 0.24
TUBB3-201ENST00000315491 SLC10A2Q12908 348 aaPredicted RBP16.58■□□□□ 0.24
TUBB3-201ENST00000315491 SKIV2LQ15477 1246 aaKnown RBP16.58■□□□□ 0.24
TUBB3-201ENST00000315491 TTC39BQ5VTQ0 682 aaPredicted RBP16.58■□□□□ 0.24
TUBB3-201ENST00000315491 ICE2Q659A1 982 aa16.58■□□□□ 0.24
TUBB3-201ENST00000315491 DRICH1Q6PGQ1 229 aaPredicted RBP16.58■□□□□ 0.24
TUBB3-201ENST00000315491 BZW1Q7L1Q6 419 aaKnown RBP16.58■□□□□ 0.24
TUBB3-201ENST00000315491 TFAP2DQ7Z6R9 452 aa16.58■□□□□ 0.24
TUBB3-201ENST00000315491 LZTR1Q8N653 840 aa16.58■□□□□ 0.24
TUBB3-201ENST00000315491 NPWQ8N729 165 aa16.58■□□□□ 0.24
TUBB3-201ENST00000315491 HNRNPLLQ8WVV9 542 aaKnown RBP16.58■□□□□ 0.24
TUBB3-201ENST00000315491 SUSD6Q92537 303 aa16.58■□□□□ 0.24
TUBB3-201ENST00000315491 RSPRY1Q96DX4 576 aa16.58■□□□□ 0.24
TUBB3-201ENST00000315491 RETREG1Q9H6L5 497 aa16.58■□□□□ 0.24
TUBB3-201ENST00000315491 UBE2ZQ9H832 354 aaPredicted RBP16.58■□□□□ 0.24
TUBB3-201ENST00000315491 TRPV4Q9HBA0 871 aa16.58■□□□□ 0.24
TUBB3-201ENST00000315491 DONSONQ9NYP3 566 aa16.58■□□□□ 0.24
TUBB3-201ENST00000315491 TBC1D14Q9P2M4 693 aa16.58■□□□□ 0.24
TUBB3-201ENST00000315491 ADAM21Q9UKJ8 722 aa16.58■□□□□ 0.24
TUBB3-201ENST00000315491 DNPEPQ9ULA0 475 aa16.58■□□□□ 0.24
TUBB3-201ENST00000315491 USP15Q9Y4E8 981 aaPredicted RBP16.58■□□□□ 0.24
TUBB3-201ENST00000315491 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.57■□□□□ 0.24
TUBB3-201ENST00000315491 MAP3K6O95382 1288 aa16.57■□□□□ 0.24
TUBB3-201ENST00000315491 CDH4P55283 916 aa16.57■□□□□ 0.24
TUBB3-201ENST00000315491 BYSLQ13895 437 aaKnown RBP16.57■□□□□ 0.24
TUBB3-201ENST00000315491 TTC27Q6P3X3 843 aa16.57■□□□□ 0.24
TUBB3-201ENST00000315491 CCDC137Q6PK04 289 aaKnown RBP16.57■□□□□ 0.24
TUBB3-201ENST00000315491 KIAA1958Q8N8K9 716 aa16.57■□□□□ 0.24
TUBB3-201ENST00000315491 TDRD5Q8NAT2 981 aaKnown RBP16.57■□□□□ 0.24
TUBB3-201ENST00000315491 HJURPQ8NCD3 748 aaPredicted RBP16.57■□□□□ 0.24
TUBB3-201ENST00000315491 NKD2Q969F2 451 aaPredicted RBP16.57■□□□□ 0.24
TUBB3-201ENST00000315491 TMA16Q96EY4 203 aaKnown RBP16.57■□□□□ 0.24
TUBB3-201ENST00000315491 RUNDC3BQ96NL0 473 aa16.57■□□□□ 0.24
TUBB3-201ENST00000315491 LRRC3BQ96PB8 259 aa16.57■□□□□ 0.24
TUBB3-201ENST00000315491 KLC2Q9H0B6 622 aa16.57■□□□□ 0.24
TUBB3-201ENST00000315491 NDFIP2Q9NV92 336 aa16.57■□□□□ 0.24
TUBB3-201ENST00000315491 OBP2AQ9NY56 170 aa16.57■□□□□ 0.24
TUBB3-201ENST00000315491 ZNF212Q9UDV6 495 aa16.57■□□□□ 0.24
TUBB3-201ENST00000315491 RAD54BQ9Y620 910 aa16.57■□□□□ 0.24
TUBB3-201ENST00000315491 NUP210Q8TEM1 1887 aaPredicted RBP16.57■□□□□ 0.24
TUBB3-201ENST00000315491 TYW5A2RUC4 315 aaKnown RBP16.56■□□□□ 0.24
TUBB3-201ENST00000315491 RBP3P10745 1247 aa16.56■□□□□ 0.24
TUBB3-201ENST00000315491 KCNA5P22460 613 aa16.56■□□□□ 0.24
TUBB3-201ENST00000315491 FCARP24071 287 aa16.56■□□□□ 0.24
TUBB3-201ENST00000315491 MAGEA9P43362 315 aa16.56■□□□□ 0.24
TUBB3-201ENST00000315491 KCNJ1P48048 391 aa16.56■□□□□ 0.24
TUBB3-201ENST00000315491 MAPKAPK2P49137 400 aa16.56■□□□□ 0.24
TUBB3-201ENST00000315491 LEKR1Q6ZMV7 388 aa16.56■□□□□ 0.24
TUBB3-201ENST00000315491 CHST9Q7L1S5 443 aa16.56■□□□□ 0.24
TUBB3-201ENST00000315491 NETO2Q8NC67 525 aa16.56■□□□□ 0.24
TUBB3-201ENST00000315491 BPIFB1Q8TDL5 484 aa16.56■□□□□ 0.24
TUBB3-201ENST00000315491 PPM1EQ8WY54 764 aa16.56■□□□□ 0.24
TUBB3-201ENST00000315491 OLFM3Q96PB7 478 aa16.56■□□□□ 0.24
TUBB3-201ENST00000315491 HEPACAM2A8MVW5 462 aa16.56■□□□□ 0.24
TUBB3-201ENST00000315491 H7C0C1 242 aa16.56■□□□□ 0.24
TUBB3-201ENST00000315491 SLC9A3R1O14745 358 aaPredicted RBP16.56■□□□□ 0.24
TUBB3-201ENST00000315491 TBL1XO60907 577 aa16.56■□□□□ 0.24
TUBB3-201ENST00000315491 CLDN11O75508 207 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms