RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 MOCS2O96007 188 aaPredicted RBP18.83■□□□□ 0.61
CCDC43-201ENST00000315286 OLIG2Q13516 323 aa18.83■□□□□ 0.61
CCDC43-201ENST00000315286 RTP2Q5QGT7 225 aa18.83■□□□□ 0.61
CCDC43-201ENST00000315286 MANEALQ5VSG8 457 aa18.83■□□□□ 0.61
CCDC43-201ENST00000315286 YTHDF3Q7Z739 585 aaKnown RBP18.83■□□□□ 0.61
CCDC43-201ENST00000315286 DPF3Q92784 378 aa18.83■□□□□ 0.61
CCDC43-201ENST00000315286 CRISPLD1Q9H336 500 aa18.83■□□□□ 0.61
CCDC43-201ENST00000315286 IL37Q9NZH6 218 aa18.83■□□□□ 0.61
CCDC43-201ENST00000315286 OGDHLQ9ULD0 1010 aa18.83■□□□□ 0.61
CCDC43-201ENST00000315286 MRPL42Q9Y6G3 142 aaKnown RBP18.83■□□□□ 0.61
CCDC43-201ENST00000315286 FNDC1Q4ZHG4 1894 aaPredicted RBP18.83■□□□□ 0.61
CCDC43-201ENST00000315286 FAM159BA6NKW6 160 aa18.83■□□□□ 0.6
CCDC43-201ENST00000315286 SNX3O60493 162 aa18.83■□□□□ 0.6
CCDC43-201ENST00000315286 CSH1P0DML2 217 aa18.83■□□□□ 0.6
CCDC43-201ENST00000315286 CSH2P0DML3 217 aa18.83■□□□□ 0.6
CCDC43-201ENST00000315286 CPB1P15086 417 aa18.83■□□□□ 0.6
CCDC43-201ENST00000315286 ZKSCAN8Q15776 578 aaPredicted RBP18.83■□□□□ 0.6
CCDC43-201ENST00000315286 TEX44Q53QW1 395 aa18.83■□□□□ 0.6
CCDC43-201ENST00000315286 TTC39BQ5VTQ0 682 aaPredicted RBP18.83■□□□□ 0.6
CCDC43-201ENST00000315286 SH2D5Q6ZV89 423 aa18.83■□□□□ 0.6
CCDC43-201ENST00000315286 TAS1R1Q7RTX1 841 aa18.83■□□□□ 0.6
CCDC43-201ENST00000315286 ZSCAN18Q8TBC5 510 aaPredicted RBP18.83■□□□□ 0.6
CCDC43-201ENST00000315286 ALKBH8Q96BT7 664 aaKnown RBP18.83■□□□□ 0.6
CCDC43-201ENST00000315286 OXNAD1Q96HP4 312 aaPredicted RBP18.83■□□□□ 0.6
CCDC43-201ENST00000315286 SERPINB11Q96P15 392 aa18.83■□□□□ 0.6
CCDC43-201ENST00000315286 RNF208Q9H0X6 261 aa18.83■□□□□ 0.6
CCDC43-201ENST00000315286 MOCS1Q9NZB8 636 aa18.83■□□□□ 0.6
CCDC43-201ENST00000315286 ZNF180Q9UJW8 692 aa18.83■□□□□ 0.6
CCDC43-201ENST00000315286 HOXA2O43364 376 aa18.82■□□□□ 0.6
CCDC43-201ENST00000315286 ZWINTO95229 277 aa18.82■□□□□ 0.6
CCDC43-201ENST00000315286 HOXC13P31276 330 aa18.82■□□□□ 0.6
CCDC43-201ENST00000315286 RNF187Q5TA31 235 aaPredicted RBP18.82■□□□□ 0.6
CCDC43-201ENST00000315286 STEAP4Q687X5 459 aa18.82■□□□□ 0.6
CCDC43-201ENST00000315286 MSANTD2Q6P1R3 559 aa18.82■□□□□ 0.6
CCDC43-201ENST00000315286 LVRNQ6Q4G3 990 aa18.82■□□□□ 0.6
CCDC43-201ENST00000315286 RNF19BQ6ZMZ0 732 aa18.82■□□□□ 0.6
CCDC43-201ENST00000315286 ARHGAP36Q6ZRI8 547 aa18.82■□□□□ 0.6
CCDC43-201ENST00000315286 C14orf80Q86SX3 495 aa18.82■□□□□ 0.6
CCDC43-201ENST00000315286 ARHGAP12Q8IWW6 846 aa18.82■□□□□ 0.6
CCDC43-201ENST00000315286 UNC5BQ8IZJ1 945 aa18.82■□□□□ 0.6
CCDC43-201ENST00000315286 OTUD6BQ8N6M0 293 aa18.82■□□□□ 0.6
CCDC43-201ENST00000315286 TCP10LQ8TDR4 215 aa18.82■□□□□ 0.6
CCDC43-201ENST00000315286 PPP1R12CQ9BZL4 782 aa18.82■□□□□ 0.6
CCDC43-201ENST00000315286 C12orf65Q9H3J6 166 aaKnown RBP18.82■□□□□ 0.6
CCDC43-201ENST00000315286 HIPK3Q9H422 1215 aa18.82■□□□□ 0.6
CCDC43-201ENST00000315286 TRHDEQ9UKU6 1024 aa18.82■□□□□ 0.6
CCDC43-201ENST00000315286 HS3ST4Q9Y661 456 aa18.82■□□□□ 0.6
CCDC43-201ENST00000315286 GOLGA6L7A0A1B0GV03 622 aa18.81■□□□□ 0.6
CCDC43-201ENST00000315286 MTMR11A4FU01 709 aa18.81■□□□□ 0.6
CCDC43-201ENST00000315286 DFFAO00273 331 aa18.81■□□□□ 0.6
CCDC43-201ENST00000315286 TBC1D4O60343 1298 aa18.81■□□□□ 0.6
CCDC43-201ENST00000315286 USP12O75317 370 aa18.81■□□□□ 0.6
CCDC43-201ENST00000315286 VNN2O95498 520 aa18.81■□□□□ 0.6
CCDC43-201ENST00000315286 JCHAINP01591 159 aa18.81■□□□□ 0.6
CCDC43-201ENST00000315286 GPR17Q13304 367 aa18.81■□□□□ 0.6
CCDC43-201ENST00000315286 HHATQ5VTY9 493 aa18.81■□□□□ 0.6
CCDC43-201ENST00000315286 OR52K1Q8NGK4 314 aa18.81■□□□□ 0.6
CCDC43-201ENST00000315286 BCL7CQ8WUZ0 217 aaPredicted RBP18.81■□□□□ 0.6
CCDC43-201ENST00000315286 TBC1D31Q96DN5 1066 aa18.81■□□□□ 0.6
CCDC43-201ENST00000315286 SLC39A13Q96H72 371 aa18.81■□□□□ 0.6
CCDC43-201ENST00000315286 MRPL9Q9BYD2 267 aaKnown RBP18.81■□□□□ 0.6
CCDC43-201ENST00000315286 GBA3Q9H227 469 aa18.81■□□□□ 0.6
CCDC43-201ENST00000315286 NDFIP2Q9NV92 336 aa18.81■□□□□ 0.6
CCDC43-201ENST00000315286 SYBUQ9NX95 663 aa18.81■□□□□ 0.6
CCDC43-201ENST00000315286 TLR6Q9Y2C9 796 aa18.81■□□□□ 0.6
CCDC43-201ENST00000315286 GREB1Q4ZG55 1949 aa18.81■□□□□ 0.6
CCDC43-201ENST00000315286 FAM92AA1XBS5 289 aa18.81■□□□□ 0.6
CCDC43-201ENST00000315286 TRIM49D1C9J1S8 452 aa18.81■□□□□ 0.6
CCDC43-201ENST00000315286 ALDH1A2O94788 518 aa18.81■□□□□ 0.6
CCDC43-201ENST00000315286 AP2A1O95782 977 aa18.81■□□□□ 0.6
CCDC43-201ENST00000315286 PYGBP11216 843 aa18.81■□□□□ 0.6
CCDC43-201ENST00000315286 CCL5P13501 91 aa18.81■□□□□ 0.6
CCDC43-201ENST00000315286 NFKB1P19838 968 aa18.81■□□□□ 0.6
CCDC43-201ENST00000315286 YWHAQP27348 245 aa18.81■□□□□ 0.6
CCDC43-201ENST00000315286 TUBP50607 506 aa18.81■□□□□ 0.6
CCDC43-201ENST00000315286 ITIH4Q14624 930 aa18.81■□□□□ 0.6
CCDC43-201ENST00000315286 MGAT5BQ3V5L5 792 aa18.81■□□□□ 0.6
CCDC43-201ENST00000315286 CYS1Q717R9 158 aa18.81■□□□□ 0.6
CCDC43-201ENST00000315286 DEFB128Q7Z7B8 93 aa18.81■□□□□ 0.6
CCDC43-201ENST00000315286 ARHGAP18Q8N392 663 aa18.81■□□□□ 0.6
CCDC43-201ENST00000315286 ANKS4BQ8N8V4 417 aa18.81■□□□□ 0.6
CCDC43-201ENST00000315286 SPOCK2Q92563 424 aa18.81■□□□□ 0.6
CCDC43-201ENST00000315286 TEKT5Q96M29 485 aa18.81■□□□□ 0.6
CCDC43-201ENST00000315286 VAT1Q99536 393 aa18.81■□□□□ 0.6
CCDC43-201ENST00000315286 TMEM175Q9BSA9 504 aa18.81■□□□□ 0.6
CCDC43-201ENST00000315286 MLPHQ9BV36 600 aaPredicted RBP18.81■□□□□ 0.6
CCDC43-201ENST00000315286 CATSPERBQ9H7T0 1116 aa18.81■□□□□ 0.6
CCDC43-201ENST00000315286 SLC17A7Q9P2U7 560 aa18.81■□□□□ 0.6
CCDC43-201ENST00000315286 E9PAM4 449 aa18.8■□□□□ 0.6
CCDC43-201ENST00000315286 FGF10O15520 208 aaPredicted RBP18.8■□□□□ 0.6
CCDC43-201ENST00000315286 KRT37O76014 449 aa18.8■□□□□ 0.6
CCDC43-201ENST00000315286 SUN1O94901 812 aa18.8■□□□□ 0.6
CCDC43-201ENST00000315286 TBX18O95935 607 aa18.8■□□□□ 0.6
CCDC43-201ENST00000315286 OAS1P00973 400 aaKnown RBP18.8■□□□□ 0.6
CCDC43-201ENST00000315286 CXCL10P02778 98 aa18.8■□□□□ 0.6
CCDC43-201ENST00000315286 SNRPAP09012 282 aaKnown RBP18.8■□□□□ 0.6
CCDC43-201ENST00000315286 ADRA1DP25100 572 aa18.8■□□□□ 0.6
CCDC43-201ENST00000315286 HTR7P34969 479 aa18.8■□□□□ 0.6
CCDC43-201ENST00000315286 MLLT6P55198 1093 aaPredicted RBP18.8■□□□□ 0.6
CCDC43-201ENST00000315286 COG7P83436 770 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms