RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 FAM220BPB1ANY3 271 aa9□□□□□ -0.97
COL6A5-202ENST00000312481 ZNF701M0R085 212 aaPredicted RBP9□□□□□ -0.97
COL6A5-202ENST00000312481 AKR1B1P15121 316 aa9□□□□□ -0.97
COL6A5-202ENST00000312481 ERVK-9P63128 1117 aa9□□□□□ -0.97
COL6A5-202ENST00000312481 FOXM1Q08050 763 aa9□□□□□ -0.97
COL6A5-202ENST00000312481 FAM45AQ8TCE6 357 aa9□□□□□ -0.97
COL6A5-202ENST00000312481 ARL8AQ96BM9 186 aa9□□□□□ -0.97
COL6A5-202ENST00000312481 IRX2Q9BZI1 471 aaPredicted RBP9□□□□□ -0.97
COL6A5-202ENST00000312481 HMGXB4Q9UGU5 601 aa9□□□□□ -0.97
COL6A5-202ENST00000312481 ZNF711Q9Y462 761 aa9□□□□□ -0.97
COL6A5-202ENST00000312481 IL1BP01584 269 aa8.99□□□□□ -0.97
COL6A5-202ENST00000312481 NEK3P51956 506 aa8.99□□□□□ -0.97
COL6A5-202ENST00000312481 PSMA8Q8TAA3 256 aa8.99□□□□□ -0.97
COL6A5-202ENST00000312481 HTR3CQ8WXA8 447 aa8.99□□□□□ -0.97
COL6A5-202ENST00000312481 MTMR8Q96EF0 704 aa8.99□□□□□ -0.97
COL6A5-202ENST00000312481 JAG2Q9Y219 1238 aa8.99□□□□□ -0.97
COL6A5-202ENST00000312481 PI4K2BG5E9Z4 385 aa8.99□□□□□ -0.97
COL6A5-202ENST00000312481 MDM4O15151 490 aa8.99□□□□□ -0.97
COL6A5-202ENST00000312481 TM7SF2O76062 418 aa8.99□□□□□ -0.97
COL6A5-202ENST00000312481 RPL9P32969 192 aaKnown RBP8.99□□□□□ -0.97
COL6A5-202ENST00000312481 HECTD3Q5T447 861 aa8.99□□□□□ -0.97
COL6A5-202ENST00000312481 GET4Q7L5D6 327 aaPredicted RBP8.99□□□□□ -0.97
COL6A5-202ENST00000312481 LRRC43Q8N309 656 aa8.99□□□□□ -0.97
COL6A5-202ENST00000312481 SVOPLQ8N434 492 aa8.99□□□□□ -0.97
COL6A5-202ENST00000312481 RAB2BQ8WUD1 216 aa8.99□□□□□ -0.97
COL6A5-202ENST00000312481 NR4A3Q92570 626 aa8.99□□□□□ -0.97
COL6A5-202ENST00000312481 MFSD14AQ96MC6 490 aa8.99□□□□□ -0.97
COL6A5-202ENST00000312481 GINS4Q9BRT9 223 aa8.99□□□□□ -0.97
COL6A5-202ENST00000312481 THUMPD1Q9NXG2 353 aaKnown RBP8.99□□□□□ -0.97
COL6A5-202ENST00000312481 DKK3Q9UBP4 350 aa8.99□□□□□ -0.97
COL6A5-202ENST00000312481 PRRC2BQ5JSZ5 2229 aaKnown RBP8.99□□□□□ -0.97
COL6A5-202ENST00000312481 BCLAF3A2AJT9 711 aaKnown RBP8.99□□□□□ -0.97
COL6A5-202ENST00000312481 SERPINF2P08697 491 aa8.99□□□□□ -0.97
COL6A5-202ENST00000312481 CXCR2P25025 360 aa8.99□□□□□ -0.97
COL6A5-202ENST00000312481 PTDSS1P48651 473 aaKnown RBP8.99□□□□□ -0.97
COL6A5-202ENST00000312481 ILDR1Q86SU0 546 aaPredicted RBP8.99□□□□□ -0.97
COL6A5-202ENST00000312481 DHRSXQ8N5I4 330 aa8.99□□□□□ -0.97
COL6A5-202ENST00000312481 ZNF669Q96BR6 464 aaPredicted RBP8.99□□□□□ -0.97
COL6A5-202ENST00000312481 PPP3R2Q96LZ3 170 aa8.99□□□□□ -0.97
COL6A5-202ENST00000312481 RPRD1AQ96P16 312 aaPredicted RBP8.99□□□□□ -0.97
COL6A5-202ENST00000312481 MTIF3Q9H2K0 278 aaKnown RBP8.99□□□□□ -0.97
COL6A5-202ENST00000312481 AGO4Q9HCK5 861 aaKnown RBP8.99□□□□□ -0.97
COL6A5-202ENST00000312481 KLHL28Q9NXS3 571 aa8.99□□□□□ -0.97
COL6A5-202ENST00000312481 GJA3Q9Y6H8 435 aa8.99□□□□□ -0.97
COL6A5-202ENST00000312481 SPATA31A5Q5VU36 1347 aa8.99□□□□□ -0.97
COL6A5-202ENST00000312481 SPATA31A7Q8IWB4 1347 aa8.99□□□□□ -0.97
COL6A5-202ENST00000312481 FCHO1O14526 889 aa8.99□□□□□ -0.97
COL6A5-202ENST00000312481 DNAJC6O75061 913 aa8.99□□□□□ -0.97
COL6A5-202ENST00000312481 ZYXQ15942 572 aaKnown RBP8.99□□□□□ -0.97
COL6A5-202ENST00000312481 TRIM71Q2Q1W2 868 aaKnown RBP8.99□□□□□ -0.97
COL6A5-202ENST00000312481 C6orf52Q5T4I8 152 aa8.99□□□□□ -0.97
COL6A5-202ENST00000312481 HERC6Q8IVU3 1022 aa8.99□□□□□ -0.97
COL6A5-202ENST00000312481 C19orf18Q8NEA5 215 aa8.99□□□□□ -0.97
COL6A5-202ENST00000312481 TMIEQ8NEW7 156 aa8.99□□□□□ -0.97
COL6A5-202ENST00000312481 B4GALNT2Q8NHY0 566 aa8.99□□□□□ -0.97
COL6A5-202ENST00000312481 RFWD2Q8NHY2 731 aa8.99□□□□□ -0.97
COL6A5-202ENST00000312481 STAG3L4Q8TBR4 150 aa8.99□□□□□ -0.97
COL6A5-202ENST00000312481 TMA16Q96EY4 203 aaKnown RBP8.99□□□□□ -0.97
COL6A5-202ENST00000312481 LEF1Q9UJU2 399 aaPredicted RBP8.99□□□□□ -0.97
COL6A5-202ENST00000312481 GPR182O15218 404 aa8.99□□□□□ -0.97
COL6A5-202ENST00000312481 SGTAO43765 313 aa8.99□□□□□ -0.97
COL6A5-202ENST00000312481 FAM189A1O60320 539 aa8.99□□□□□ -0.97
COL6A5-202ENST00000312481 C21orf59P57076 290 aa8.99□□□□□ -0.97
COL6A5-202ENST00000312481 ZNF846Q147U1 533 aa8.99□□□□□ -0.97
COL6A5-202ENST00000312481 EPS8L1Q8TE68 723 aa8.99□□□□□ -0.97
COL6A5-202ENST00000312481 CCDC90BQ9GZT6 254 aa8.99□□□□□ -0.97
COL6A5-202ENST00000312481 RPAP3Q9H6T3 665 aaPredicted RBP8.99□□□□□ -0.97
COL6A5-202ENST00000312481 SH3GLB1Q9Y371 365 aa8.99□□□□□ -0.97
COL6A5-202ENST00000312481 KNTC1P50748 2209 aa8.99□□□□□ -0.97
COL6A5-202ENST00000312481 CXCL11O14625 94 aa8.99□□□□□ -0.97
COL6A5-202ENST00000312481 PEX1O43933 1283 aa8.99□□□□□ -0.97
COL6A5-202ENST00000312481 IPO13O94829 963 aaKnown RBP8.99□□□□□ -0.97
COL6A5-202ENST00000312481 ALDH5A1P51649 535 aaPredicted RBP8.99□□□□□ -0.97
COL6A5-202ENST00000312481 PACS1Q6VY07 963 aa8.99□□□□□ -0.97
COL6A5-202ENST00000312481 RFX8Q6ZV50 586 aa8.99□□□□□ -0.97
COL6A5-202ENST00000312481 SPATA19Q7Z5L4 167 aa8.99□□□□□ -0.97
COL6A5-202ENST00000312481 TRABD2AQ86V40 505 aa8.99□□□□□ -0.97
COL6A5-202ENST00000312481 OTULINQ96BN8 352 aa8.99□□□□□ -0.97
COL6A5-202ENST00000312481 C9orf72Q96LT7 481 aa8.99□□□□□ -0.97
COL6A5-202ENST00000312481 DUSP9Q99956 384 aaKnown RBP8.99□□□□□ -0.97
COL6A5-202ENST00000312481 CISHQ9NSE2 258 aa8.99□□□□□ -0.97
COL6A5-202ENST00000312481 MARF1Q9Y4F3 1742 aaKnown RBP8.99□□□□□ -0.97
COL6A5-202ENST00000312481 PARNO95453 639 aaKnown RBP8.99□□□□□ -0.97
COL6A5-202ENST00000312481 CCNB1P14635 433 aa8.99□□□□□ -0.97
COL6A5-202ENST00000312481 ATP5F1P24539 256 aaPredicted RBP8.99□□□□□ -0.97
COL6A5-202ENST00000312481 CCNG1P51959 295 aa8.99□□□□□ -0.97
COL6A5-202ENST00000312481 GLB1LQ6UWU2 654 aa8.99□□□□□ -0.97
COL6A5-202ENST00000312481 LINC00471Q8N535 108 aa8.99□□□□□ -0.97
COL6A5-202ENST00000312481 TSPAN14Q8NG11 270 aa8.99□□□□□ -0.97
COL6A5-202ENST00000312481 KAT2BQ92831 832 aa8.99□□□□□ -0.97
COL6A5-202ENST00000312481 TTYH3Q9C0H2 523 aa8.99□□□□□ -0.97
COL6A5-202ENST00000312481 DDX28Q9NUL7 540 aaKnown RBP8.99□□□□□ -0.97
COL6A5-202ENST00000312481 PCDHGC3Q9UN70 934 aa8.99□□□□□ -0.97
COL6A5-202ENST00000312481 FAM95CA0A1B0GW59 222 aa8.99□□□□□ -0.97
COL6A5-202ENST00000312481 MYBP10242 640 aa8.99□□□□□ -0.97
COL6A5-202ENST00000312481 ADSSP30520 456 aa8.99□□□□□ -0.97
COL6A5-202ENST00000312481 NPTX2P47972 431 aa8.99□□□□□ -0.97
COL6A5-202ENST00000312481 SEC24CP53992 1094 aa8.99□□□□□ -0.97
COL6A5-202ENST00000312481 PTPRNQ16849 979 aa8.99□□□□□ -0.97
COL6A5-202ENST00000312481 BRMS1LQ5PSV4 323 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms