RNA–Protein interactions for RNA: ENST00000309422.6

VEGFB-201, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFB, Length 1,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-201ENST00000309422 LMNAP02545 664 aaKnown RBP20.41■□□□□ 0.86
VEGFB-201ENST00000309422 EPHX1P07099 455 aa20.41■□□□□ 0.86
VEGFB-201ENST00000309422 H2AFZP0C0S5 128 aa20.41■□□□□ 0.86
VEGFB-201ENST00000309422 TDGF1P13385 188 aa20.41■□□□□ 0.86
VEGFB-201ENST00000309422 OR1E1P30953 314 aa20.41■□□□□ 0.86
VEGFB-201ENST00000309422 CSKP41240 450 aa20.41■□□□□ 0.86
VEGFB-201ENST00000309422 PXNP49023 591 aaPredicted RBP20.41■□□□□ 0.86
VEGFB-201ENST00000309422 KRT83P78385 493 aa20.41■□□□□ 0.86
VEGFB-201ENST00000309422 SIM2Q14190 667 aaPredicted RBP20.41■□□□□ 0.86
VEGFB-201ENST00000309422 ZNF234Q14588 700 aa20.41■□□□□ 0.86
VEGFB-201ENST00000309422 ARID5BQ14865 1188 aa20.41■□□□□ 0.86
VEGFB-201ENST00000309422 FUT11Q495W5 492 aa20.41■□□□□ 0.86
VEGFB-201ENST00000309422 H2AFVQ71UI9 128 aa20.41■□□□□ 0.86
VEGFB-201ENST00000309422 SETD3Q86TU7 594 aaPredicted RBP20.41■□□□□ 0.86
VEGFB-201ENST00000309422 IGSF8Q969P0 613 aa20.41■□□□□ 0.86
VEGFB-201ENST00000309422 TBC1D31Q96DN5 1066 aa20.41■□□□□ 0.86
VEGFB-201ENST00000309422 ADAM33Q9BZ11 813 aa20.41■□□□□ 0.86
VEGFB-201ENST00000309422 THAP2Q9H0W7 228 aa20.41■□□□□ 0.86
VEGFB-201ENST00000309422 OSBPL2Q9H1P3 480 aa20.41■□□□□ 0.86
VEGFB-201ENST00000309422 RETREG1Q9H6L5 497 aa20.41■□□□□ 0.86
VEGFB-201ENST00000309422 NHEJ1Q9H9Q4 299 aaPredicted RBP20.41■□□□□ 0.86
VEGFB-201ENST00000309422 FBRSQ9HAH7 460 aa20.41■□□□□ 0.86
VEGFB-201ENST00000309422 C2orf42Q9NWW7 574 aa20.41■□□□□ 0.86
VEGFB-201ENST00000309422 ANAPC7Q9UJX3 599 aa20.41■□□□□ 0.86
VEGFB-201ENST00000309422 EIF3CLB5ME19 914 aaKnown RBP20.4■□□□□ 0.86
VEGFB-201ENST00000309422 ADAM23O75077 832 aa20.4■□□□□ 0.86
VEGFB-201ENST00000309422 ETFBP38117 255 aa20.4■□□□□ 0.86
VEGFB-201ENST00000309422 IL12RB1P42701 662 aa20.4■□□□□ 0.86
VEGFB-201ENST00000309422 SCAPQ12770 1279 aa20.4■□□□□ 0.86
VEGFB-201ENST00000309422 PIGHQ14442 188 aaPredicted RBP20.4■□□□□ 0.86
VEGFB-201ENST00000309422 ACAP1Q15027 740 aa20.4■□□□□ 0.86
VEGFB-201ENST00000309422 PLEKHG6Q3KR16 790 aa20.4■□□□□ 0.86
VEGFB-201ENST00000309422 SH3PXD2AQ5TCZ1 1133 aa20.4■□□□□ 0.86
VEGFB-201ENST00000309422 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.4■□□□□ 0.86
VEGFB-201ENST00000309422 ADIPOR2Q86V24 386 aa20.4■□□□□ 0.86
VEGFB-201ENST00000309422 WFDC5Q8TCV5 224 aa20.4■□□□□ 0.86
VEGFB-201ENST00000309422 CYB5D2Q8WUJ1 264 aa20.4■□□□□ 0.86
VEGFB-201ENST00000309422 NELL1Q92832 810 aa20.4■□□□□ 0.86
VEGFB-201ENST00000309422 P2RY11Q96G91 374 aa20.4■□□□□ 0.86
VEGFB-201ENST00000309422 EIF3CQ99613 913 aaKnown RBP20.4■□□□□ 0.86
VEGFB-201ENST00000309422 C2orf49Q9BVC5 232 aaPredicted RBP20.4■□□□□ 0.86
VEGFB-201ENST00000309422 NUP85Q9BW27 656 aa20.4■□□□□ 0.86
VEGFB-201ENST00000309422 CTTNBP2NLQ9P2B4 639 aa20.4■□□□□ 0.86
VEGFB-201ENST00000309422 PPARGC1AQ9UBK2 798 aaKnown RBP20.4■□□□□ 0.86
VEGFB-201ENST00000309422 SUN2Q9UH99 717 aa20.4■□□□□ 0.86
VEGFB-201ENST00000309422 IP6K2Q9UHH9 426 aa20.4■□□□□ 0.86
VEGFB-201ENST00000309422 GMEB2Q9UKD1 530 aa20.4■□□□□ 0.86
VEGFB-201ENST00000309422 MUC6Q6W4X9 2439 aa20.4■□□□□ 0.86
VEGFB-201ENST00000309422 TMEM191CA6NGB0 347 aa20.39■□□□□ 0.85
VEGFB-201ENST00000309422 MYO1FO00160 1098 aa20.39■□□□□ 0.85
VEGFB-201ENST00000309422 SRPRAP08240 638 aaKnown RBP20.39■□□□□ 0.85
VEGFB-201ENST00000309422 ECT2LQ008S8 904 aa20.39■□□□□ 0.85
VEGFB-201ENST00000309422 NRG1Q02297 640 aaPredicted RBP20.39■□□□□ 0.85
VEGFB-201ENST00000309422 ELF2Q15723 593 aa20.39■□□□□ 0.85
VEGFB-201ENST00000309422 TMEM92Q6UXU6 159 aa20.39■□□□□ 0.85
VEGFB-201ENST00000309422 ZNF783Q6ZMS7 281 aa20.39■□□□□ 0.85
VEGFB-201ENST00000309422 TFAP2DQ7Z6R9 452 aa20.39■□□□□ 0.85
VEGFB-201ENST00000309422 KIAA0907Q7Z7F0 614 aaPredicted RBP20.39■□□□□ 0.85
VEGFB-201ENST00000309422 CCDC185Q8N715 623 aa20.39■□□□□ 0.85
VEGFB-201ENST00000309422 MDGA1Q8NFP4 955 aa20.39■□□□□ 0.85
VEGFB-201ENST00000309422 OLIG1Q8TAK6 271 aa20.39■□□□□ 0.85
VEGFB-201ENST00000309422 GAB3Q8WWW8 586 aa20.39■□□□□ 0.85
VEGFB-201ENST00000309422 SORCS1Q8WY21 1168 aa20.39■□□□□ 0.85
VEGFB-201ENST00000309422 MYEOVQ96EZ4 313 aa20.39■□□□□ 0.85
VEGFB-201ENST00000309422 ACOX2Q99424 681 aa20.39■□□□□ 0.85
VEGFB-201ENST00000309422 CATSPERBQ9H7T0 1116 aa20.39■□□□□ 0.85
VEGFB-201ENST00000309422 UVRAGQ9P2Y5 699 aa20.39■□□□□ 0.85
VEGFB-201ENST00000309422 RAD54BQ9Y620 910 aa20.39■□□□□ 0.85
VEGFB-201ENST00000309422 PROB1E7EW31 1015 aa20.38■□□□□ 0.85
VEGFB-201ENST00000309422 ZNF217O75362 1048 aa20.38■□□□□ 0.85
VEGFB-201ENST00000309422 ACADMP11310 421 aa20.38■□□□□ 0.85
VEGFB-201ENST00000309422 HTR7P34969 479 aa20.38■□□□□ 0.85
VEGFB-201ENST00000309422 CYLC1P35663 651 aaPredicted RBP20.38■□□□□ 0.85
VEGFB-201ENST00000309422 SSR1P43307 286 aaKnown RBP20.38■□□□□ 0.85
VEGFB-201ENST00000309422 SPA17Q15506 151 aa20.38■□□□□ 0.85
VEGFB-201ENST00000309422 C5orf22Q49AR2 442 aa20.38■□□□□ 0.85
VEGFB-201ENST00000309422 FSCBQ5H9T9 825 aa20.38■□□□□ 0.85
VEGFB-201ENST00000309422 KIAA1324Q6UXG2 1013 aaKnown RBP20.38■□□□□ 0.85
VEGFB-201ENST00000309422 C14orf80Q86SX3 495 aa20.38■□□□□ 0.85
VEGFB-201ENST00000309422 GAS2L3Q86XJ1 694 aa20.38■□□□□ 0.85
VEGFB-201ENST00000309422 DNAAF5Q86Y56 855 aa20.38■□□□□ 0.85
VEGFB-201ENST00000309422 KDM1BQ8NB78 822 aa20.38■□□□□ 0.85
VEGFB-201ENST00000309422 ZNF564Q8TBZ8 553 aaPredicted RBP20.38■□□□□ 0.85
VEGFB-201ENST00000309422 TTC17Q96AE7 1141 aa20.38■□□□□ 0.85
VEGFB-201ENST00000309422 TPSD1Q9BZJ3 242 aa20.38■□□□□ 0.85
VEGFB-201ENST00000309422 EPC1Q9H2F5 836 aa20.38■□□□□ 0.85
VEGFB-201ENST00000309422 NCDNQ9UBB6 729 aa20.38■□□□□ 0.85
VEGFB-201ENST00000309422 SMG5Q9UPR3 1016 aaKnown RBP20.38■□□□□ 0.85
VEGFB-201ENST00000309422 SNX10Q9Y5X0 201 aa20.38■□□□□ 0.85
VEGFB-201ENST00000309422 IGLV3-10A0A075B6K4 115 aa20.37■□□□□ 0.85
VEGFB-201ENST00000309422 DRGXA6NNA5 263 aa20.37■□□□□ 0.85
VEGFB-201ENST00000309422 CREB3O43889 395 aa20.37■□□□□ 0.85
VEGFB-201ENST00000309422 RNASEH1O60930 286 aaKnown RBP20.37■□□□□ 0.85
VEGFB-201ENST00000309422 LILRB5O75023 590 aa20.37■□□□□ 0.85
VEGFB-201ENST00000309422 CYP1A2P05177 515 aa20.37■□□□□ 0.85
VEGFB-201ENST00000309422 RHOQP17081 205 aa20.37■□□□□ 0.85
VEGFB-201ENST00000309422 L1CAMP32004 1257 aa20.37■□□□□ 0.85
VEGFB-201ENST00000309422 MAPKAPK2P49137 400 aa20.37■□□□□ 0.85
VEGFB-201ENST00000309422 ZNF135P52742 658 aaPredicted RBP20.37■□□□□ 0.85
VEGFB-201ENST00000309422 GALCP54803 685 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms