RNA–Protein interactions for RNA: ENST00000306853.1

CSPG4P2Y-201, Transcript of CSPG4 pseudogene 2 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P2Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P2Y-201ENST00000306853 I6L893 689 aaPredicted RBP11.32□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 ZBTB24O43167 697 aaPredicted RBP11.32□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 CREB3O43889 395 aa11.32□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 LRCH4O75427 683 aa11.32□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 ALDH1A2O94788 518 aa11.32□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 NDUFA10O95299 355 aa11.32□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 PAPSS2O95340 614 aaPredicted RBP11.32□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 ASLP04424 464 aa11.32□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 HOXB2P14652 356 aa11.32□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 MIPP30301 263 aa11.32□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 OR1E1P30953 314 aa11.32□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 NTSR1P30989 418 aa11.32□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 PCK1P35558 622 aa11.32□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 CSKP41240 450 aa11.32□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 MAGEA1P43355 309 aa11.32□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 TPI1P60174 286 aa11.32□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 ST8SIA6P61647 398 aa11.32□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 STARD3Q14849 445 aa11.32□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 HADHQ16836 314 aaKnown RBP11.32□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 FUT11Q495W5 492 aa11.32□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 C5orf22Q49AR2 442 aa11.32□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 FNDC3BQ53EP0 1204 aaKnown RBP11.32□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 ERMARDQ5T6L9 678 aa11.32□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 EMC10Q5UCC4 262 aa11.32□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 ZC3H14Q6PJT7 736 aaKnown RBP11.32□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 MAMSTRQ6ZN01 415 aa11.32□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 TFAP2DQ7Z6R9 452 aa11.32□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 TXLNBQ8N3L3 684 aa11.32□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 NIPA2Q8N8Q9 360 aa11.32□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 IL17RCQ8NAC3 791 aa11.32□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 PRSS33Q8NF86 280 aa11.32□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 TSTD1Q8NFU3 115 aa11.32□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 BTBD6Q96KE9 485 aa11.32□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 HHIPQ96QV1 700 aa11.32□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 EIF3CQ99613 913 aaKnown RBP11.32□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 SNRNP25Q9BV90 132 aaKnown RBP11.32□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 MUC3BQ9H195 1237 aa11.32□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 DHX35Q9H5Z1 703 aaKnown RBP11.32□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 CATSPERBQ9H7T0 1116 aa11.32□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 ZDHHC4Q9NPG8 344 aa11.32□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 MPP6Q9NZW5 540 aa11.32□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 USP18Q9UMW8 372 aa11.32□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 PLA2G4CQ9UP65 541 aa11.32□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 TRIOO75962 3097 aa11.32□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 PLXND1Q9Y4D7 1925 aa11.31□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 IGLV3-10A0A075B6K4 115 aa11.31□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 DRGXA6NNA5 263 aa11.31□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 TMEM110-MUSTN1A8MSY1 372 aa11.31□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 H0Y858 1186 aa11.31□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 SGK1O00141 431 aa11.31□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 DAPK3O43293 454 aa11.31□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 SYNCRIPO60506 623 aaKnown RBP11.31□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 CNTN5O94779 1100 aa11.31□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 LRIG2O94898 1065 aa11.31□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 HNRNPLP14866 589 aaKnown RBP eCLIP11.31□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 FECHP22830 423 aa11.31□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 EPHB2P29323 1055 aa11.31□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 L1CAMP32004 1257 aa11.31□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 HTR7P34969 479 aa11.31□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 NNMTP40261 264 aa11.31□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 WASP42768 502 aa11.31□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 NOP2P46087 812 aaKnown RBP11.31□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 IRAK1P51617 712 aa11.31□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 DGKEP52429 567 aa11.31□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 SULT2A1Q06520 285 aa11.31□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 ZNF234Q14588 700 aa11.31□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 PLEKHG6Q3KR16 790 aa11.31□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 ZNF528Q3MIS6 628 aa11.31□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 ALFQ53S48 1182 aa11.31□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 FSCBQ5H9T9 825 aa11.31□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 PITRM1Q5JRX3 1037 aa11.31□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 SERPINA13PQ6UXR4 307 aa11.31□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 KIAA0907Q7Z7F0 614 aaPredicted RBP11.31□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 SETD3Q86TU7 594 aaPredicted RBP11.31□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 PSTKQ8IV42 348 aaKnown RBP11.31□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 CAMKK1Q8N5S9 505 aa11.31□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 CCDC112Q8NEF3 446 aa11.31□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 SLC35G2Q8TBE7 412 aa11.31□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 CYB5D2Q8WUJ1 264 aa11.31□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 HSPH1Q92598 858 aa11.31□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 ATOH1Q92858 354 aaPredicted RBP11.31□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 FAM126AQ9BYI3 521 aaPredicted RBP11.31□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 RETREG1Q9H6L5 497 aa11.31□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 ZWILCHQ9H900 591 aa11.31□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 OSGEPQ9NPF4 335 aa11.31□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 CACNA2D2Q9NY47 1150 aa11.31□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 DONSONQ9NYP3 566 aa11.31□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 BCCIPQ9P287 314 aaKnown RBP eCLIP11.31□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 THAP10Q9P2Z0 257 aaPredicted RBP11.31□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 SLC25A13Q9UJS0 675 aa11.31□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 VPS28Q9UK41 221 aa11.31□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 PCDHA13Q9Y5I0 950 aa11.31□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 EPN1Q9Y6I3 576 aaPredicted RBP11.31□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 NUP205Q92621 2012 aa11.31□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 CEP192Q8TEP8 1941 aa11.31□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 SHROOM3Q8TF72 1996 aa11.3□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 TCRBV21S2A2A0A5A6 115 aa11.3□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 EEF2KO00418 725 aaKnown RBP11.3□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 FGF10O15520 208 aaPredicted RBP11.3□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 PROSCO94903 275 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms